RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 C6orf106Q9H6K1 298 aaPredicted RBP14.97□□□□□ -0.01
SMCHD1-201ENST00000320876 IER3P46695 156 aa14.97□□□□□ -0.01
SMCHD1-201ENST00000320876 SARGQ9BW04 601 aa14.97□□□□□ -0.01
SMCHD1-201ENST00000320876 C7orf77A4D0Y5 90 aa14.97□□□□□ -0.01
SMCHD1-201ENST00000320876 CRYBA1P05813 215 aa14.97□□□□□ -0.01
SMCHD1-201ENST00000320876 ABHD1Q96SE0 405 aa14.97□□□□□ -0.01
SMCHD1-201ENST00000320876 CCR2P41597 374 aa14.97□□□□□ -0.01
SMCHD1-201ENST00000320876 PAFAH1B2P68402 229 aa14.97□□□□□ -0.01
SMCHD1-201ENST00000320876 FOXO1Q12778 655 aa14.97□□□□□ -0.01
SMCHD1-201ENST00000320876 ZMIZ1Q9ULJ6 1067 aa14.97□□□□□ -0.01
SMCHD1-201ENST00000320876 IFITM10A6NMD0 228 aa14.97□□□□□ -0.01
SMCHD1-201ENST00000320876 PITX3O75364 302 aa14.97□□□□□ -0.01
SMCHD1-201ENST00000320876 LRRC3BQ96PB8 259 aa14.97□□□□□ -0.01
SMCHD1-201ENST00000320876 DNAJB12Q9NXW2 375 aaKnown RBP14.97□□□□□ -0.01
SMCHD1-201ENST00000320876 OPN4Q9UHM6 478 aa14.97□□□□□ -0.01
SMCHD1-201ENST00000320876 PSG5Q15238 335 aa14.97□□□□□ -0.01
SMCHD1-201ENST00000320876 SNRNP40Q96DI7 357 aaKnown RBP14.97□□□□□ -0.01
SMCHD1-201ENST00000320876 RASL11BQ9BPW5 248 aa14.97□□□□□ -0.01
SMCHD1-201ENST00000320876 TTC32Q5I0X7 151 aa14.96□□□□□ -0.01
SMCHD1-201ENST00000320876 SPPL3Q8TCT6 385 aa14.96□□□□□ -0.01
SMCHD1-201ENST00000320876 PPIL1Q9Y3C6 166 aa14.96□□□□□ -0.01
SMCHD1-201ENST00000320876 IGLV3-25P01717 112 aa14.96□□□□□ -0.01
SMCHD1-201ENST00000320876 TCL1AP56279 114 aa14.96□□□□□ -0.01
SMCHD1-201ENST00000320876 C4orf45Q96LM5 186 aa14.96□□□□□ -0.01
SMCHD1-201ENST00000320876 GAGE10A6NGK3 116 aa14.96□□□□□ -0.01
SMCHD1-201ENST00000320876 NMUP48645 174 aa14.96□□□□□ -0.01
SMCHD1-201ENST00000320876 ERASQ7Z444 233 aa14.96□□□□□ -0.01
SMCHD1-201ENST00000320876 MYO7BQ6PIF6 2116 aa14.96□□□□□ -0.01
SMCHD1-201ENST00000320876 TMEM265A0A087WTH1 108 aa14.96□□□□□ -0.01
SMCHD1-201ENST00000320876 SNURFLB1AK76 121 aa14.96□□□□□ -0.01
SMCHD1-201ENST00000320876 SFTPA2Q8IWL1 248 aa14.96□□□□□ -0.01
SMCHD1-201ENST00000320876 SFTPA1Q8IWL2 248 aa14.96□□□□□ -0.01
SMCHD1-201ENST00000320876 RBM38Q9H0Z9 239 aaKnown RBP14.96□□□□□ -0.01
SMCHD1-201ENST00000320876 TBX21Q9UL17 535 aa14.96□□□□□ -0.01
SMCHD1-201ENST00000320876 CXorf51AA0A1B0GTR3 108 aa14.96□□□□□ -0.01
SMCHD1-201ENST00000320876 FBLL1A6NHQ2 334 aaKnown RBP14.96□□□□□ -0.01
SMCHD1-201ENST00000320876 CRYABP02511 175 aaKnown RBP14.96□□□□□ -0.01
SMCHD1-201ENST00000320876 LGALSLQ3ZCW2 172 aaPredicted RBP14.96□□□□□ -0.01
SMCHD1-201ENST00000320876 LINC00596Q86U02 117 aa14.96□□□□□ -0.01
SMCHD1-201ENST00000320876 SYNGR2O43760 224 aa14.96□□□□□ -0.02
SMCHD1-201ENST00000320876 WNT3P56703 355 aa14.96□□□□□ -0.02
SMCHD1-201ENST00000320876 C10orf113Q5VZT2 155 aa14.96□□□□□ -0.02
SMCHD1-201ENST00000320876 RBM14Q96PK6 669 aaKnown RBP14.96□□□□□ -0.02
SMCHD1-201ENST00000320876 GCGP01275 180 aa14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 PTCRAQ6ISU1 281 aaPredicted RBP14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 GABRG3Q99928 467 aa14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 TMEM140Q9NV12 185 aa14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 AMDHD2Q9Y303 409 aa14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 SIRT5Q9NXA8 310 aa14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 SPATA45Q537H7 98 aa14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 CST9Q5W186 159 aa14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 NUBPLQ8TB37 319 aa14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 R3HDM4Q96D70 268 aa14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 TSPAN32Q96QS1 320 aa14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 LOXL2Q9Y4K0 774 aa14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 INTS1Q8N201 2190 aaKnown RBP14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 A0A1B0GU03 582 aa14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 K7EQS6 105 aa14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 COX6CP09669 75 aa14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 PRR35P0CG20 571 aa14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 HMGA1P17096 107 aaKnown RBP14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 CXCL3P19876 107 aa14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 VDAC1P21796 283 aa14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 ZNF774Q6NX45 483 aa14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 PATE1Q8WXA2 126 aa14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 WDR13Q9H1Z4 485 aa14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 V9GYH0 126 aa14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 M0R296 226 aa14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 ZNF770Q6IQ21 691 aaPredicted RBP14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 PSME4Q14997 1843 aa14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 ACTL6AO96019 429 aa14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 FMODQ06828 376 aa14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 DAOP14920 347 aa14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 OR4C12Q96R67 309 aa14.95□□□□□ -0.02
SMCHD1-201ENST00000320876 ASPDHA6ND91 283 aa14.94□□□□□ -0.02
SMCHD1-201ENST00000320876 POLR2GP62487 172 aaKnown RBP eCLIP14.94□□□□□ -0.02
SMCHD1-201ENST00000320876 ZNF117Q03924 483 aa14.94□□□□□ -0.02
SMCHD1-201ENST00000320876 PARM1Q6UWI2 310 aa14.94□□□□□ -0.02
SMCHD1-201ENST00000320876 C16orf82Q7Z2V1 217 aa14.94□□□□□ -0.02
SMCHD1-201ENST00000320876 FBXL6Q8N531 539 aa14.94□□□□□ -0.02
SMCHD1-201ENST00000320876 EID2BQ96D98 161 aa14.94□□□□□ -0.02
SMCHD1-201ENST00000320876 GPR27Q9NS67 375 aa14.94□□□□□ -0.02
SMCHD1-201ENST00000320876 SLC6A13Q9NSD5 602 aa14.94□□□□□ -0.02
SMCHD1-201ENST00000320876 LILRA5A6NI73 299 aa14.94□□□□□ -0.02
SMCHD1-201ENST00000320876 RELBQ01201 579 aa14.94□□□□□ -0.02
SMCHD1-201ENST00000320876 ZNF880Q6PDB4 577 aa14.94□□□□□ -0.02
SMCHD1-201ENST00000320876 OR4P4Q8NGL7 312 aa14.94□□□□□ -0.02
SMCHD1-201ENST00000320876 KLF3P57682 345 aaPredicted RBP14.94□□□□□ -0.02
SMCHD1-201ENST00000320876 MRPL54Q6P161 138 aaKnown RBP14.94□□□□□ -0.02
SMCHD1-201ENST00000320876 GBGT1Q8N5D6 347 aa14.94□□□□□ -0.02
SMCHD1-201ENST00000320876 FLYWCH2Q96CP2 140 aaKnown RBP14.94□□□□□ -0.02
SMCHD1-201ENST00000320876 OIT3Q8WWZ8 545 aa14.94□□□□□ -0.02
SMCHD1-201ENST00000320876 ZNF98A6NK75 572 aa14.94□□□□□ -0.02
SMCHD1-201ENST00000320876 C17orf47Q8NEP4 570 aa14.94□□□□□ -0.02
SMCHD1-201ENST00000320876 BCL7CQ8WUZ0 217 aaPredicted RBP14.94□□□□□ -0.02
SMCHD1-201ENST00000320876 CDC42EP3Q9UKI2 254 aa14.94□□□□□ -0.02
SMCHD1-201ENST00000320876 POLEQ07864 2286 aa14.94□□□□□ -0.02
SMCHD1-201ENST00000320876 DHRS7CA6NNS2 312 aa14.94□□□□□ -0.02
SMCHD1-201ENST00000320876 FAM157CP0CG43 387 aa14.94□□□□□ -0.02
SMCHD1-201ENST00000320876 CD300CQ08708 224 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms