RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 REG4Q9BYZ8 158 aa11.6□□□□□ -0.55
CASC4-201ENST00000299957 ARGFXA6NJG6 315 aa11.59□□□□□ -0.55
CASC4-201ENST00000299957 AQP7P3A6NL99 342 aa11.59□□□□□ -0.55
CASC4-201ENST00000299957 AQP7O14520 342 aa11.59□□□□□ -0.55
CASC4-201ENST00000299957 CTSDP07339 412 aaPredicted RBP11.59□□□□□ -0.55
CASC4-201ENST00000299957 HKR1P10072 659 aa11.59□□□□□ -0.55
CASC4-201ENST00000299957 EWSR1Q01844 656 aaKnown RBP eCLIP11.59□□□□□ -0.55
CASC4-201ENST00000299957 FAHD2BQ6P2I3 314 aaPredicted RBP11.59□□□□□ -0.55
CASC4-201ENST00000299957 LIAT1Q6ZQX7 453 aa11.59□□□□□ -0.55
CASC4-201ENST00000299957 CYB561D1Q8N8Q1 229 aa11.59□□□□□ -0.55
CASC4-201ENST00000299957 FAHD2AQ96GK7 314 aa11.59□□□□□ -0.55
CASC4-201ENST00000299957 OR6C6A6NF89 314 aa11.59□□□□□ -0.55
CASC4-201ENST00000299957 PPP5D1E7EU14 171 aa11.59□□□□□ -0.55
CASC4-201ENST00000299957 CHRNA7P36544 502 aa11.59□□□□□ -0.55
CASC4-201ENST00000299957 ERVS71-1P61550 626 aa11.59□□□□□ -0.55
CASC4-201ENST00000299957 SRPXP78539 464 aa11.59□□□□□ -0.55
CASC4-201ENST00000299957 BTNL3Q6UXE8 466 aa11.59□□□□□ -0.55
CASC4-201ENST00000299957 MRGPRFQ96AM1 343 aa11.59□□□□□ -0.55
CASC4-201ENST00000299957 RNF126Q9BV68 326 aa11.59□□□□□ -0.55
CASC4-201ENST00000299957 SAMD10Q9BYL1 202 aa11.59□□□□□ -0.55
CASC4-201ENST00000299957 CHST5Q9GZS9 411 aa11.59□□□□□ -0.55
CASC4-201ENST00000299957 TMPRSS5Q9H3S3 457 aa11.59□□□□□ -0.55
CASC4-201ENST00000299957 MSL2Q9HCI7 577 aa11.59□□□□□ -0.55
CASC4-201ENST00000299957 SLC2A8Q9NY64 477 aa11.59□□□□□ -0.55
CASC4-201ENST00000299957 USF3Q68DE3 2245 aa11.59□□□□□ -0.55
CASC4-201ENST00000299957 TMEM14DPA8MWL7 114 aa11.59□□□□□ -0.55
CASC4-201ENST00000299957 MPPED1O15442 326 aa11.59□□□□□ -0.55
CASC4-201ENST00000299957 ZNF735P0CB33 412 aa11.59□□□□□ -0.55
CASC4-201ENST00000299957 EIF2S3P41091 472 aaKnown RBP11.59□□□□□ -0.55
CASC4-201ENST00000299957 OR10AD1Q8NGE0 317 aa11.59□□□□□ -0.55
CASC4-201ENST00000299957 OR10S1Q8NGN2 331 aa11.59□□□□□ -0.55
CASC4-201ENST00000299957 TMEM204Q9BSN7 226 aa11.59□□□□□ -0.55
CASC4-201ENST00000299957 ABHD14AQ9BUJ0 271 aa11.59□□□□□ -0.55
CASC4-201ENST00000299957 A0A1W2PQM1 296 aa11.58□□□□□ -0.56
CASC4-201ENST00000299957 RBFOX3A6NFN3 312 aa11.58□□□□□ -0.56
CASC4-201ENST00000299957 G3V3Q6 166 aa11.58□□□□□ -0.56
CASC4-201ENST00000299957 ECI1P42126 302 aa11.58□□□□□ -0.56
CASC4-201ENST00000299957 IGLV3-21P80748 117 aaPredicted RBP11.58□□□□□ -0.56
CASC4-201ENST00000299957 RAB35Q15286 201 aa11.58□□□□□ -0.56
CASC4-201ENST00000299957 C1orf87Q8N0U7 546 aa11.58□□□□□ -0.56
CASC4-201ENST00000299957 ASB13Q8WXK3 278 aa11.58□□□□□ -0.56
CASC4-201ENST00000299957 SAT2Q96F10 170 aaPredicted RBP11.58□□□□□ -0.56
CASC4-201ENST00000299957 LYZL6O75951 148 aa11.58□□□□□ -0.56
CASC4-201ENST00000299957 CD74P04233 296 aa11.58□□□□□ -0.56
CASC4-201ENST00000299957 FCGR3AP08637 254 aa11.58□□□□□ -0.56
CASC4-201ENST00000299957 ACKR3P25106 362 aa11.58□□□□□ -0.56
CASC4-201ENST00000299957 RAC1P63000 192 aa11.58□□□□□ -0.56
CASC4-201ENST00000299957 CFHR1Q03591 330 aa11.58□□□□□ -0.56
CASC4-201ENST00000299957 IGKV1-9A0A0C4DH69 117 aa11.58□□□□□ -0.56
CASC4-201ENST00000299957 A0A1B0GTI1 187 aa11.58□□□□□ -0.56
CASC4-201ENST00000299957 H3BQ15 152 aa11.58□□□□□ -0.56
CASC4-201ENST00000299957 LTBRP36941 435 aa11.58□□□□□ -0.56
CASC4-201ENST00000299957 DLK1P80370 383 aa11.58□□□□□ -0.56
CASC4-201ENST00000299957 LFNGQ8NES3 379 aa11.58□□□□□ -0.56
CASC4-201ENST00000299957 TREM2Q9NZC2 230 aa11.58□□□□□ -0.56
CASC4-201ENST00000299957 A0A0A6YYD4 124 aa11.57□□□□□ -0.56
CASC4-201ENST00000299957 EFNA2O43921 213 aa11.57□□□□□ -0.56
CASC4-201ENST00000299957 DFFBO76075 338 aa11.57□□□□□ -0.56
CASC4-201ENST00000299957 EPHA8P29322 1005 aaPredicted RBP11.57□□□□□ -0.56
CASC4-201ENST00000299957 CEACAM6P40199 344 aa11.57□□□□□ -0.56
CASC4-201ENST00000299957 PSG4Q00888 419 aa11.57□□□□□ -0.56
CASC4-201ENST00000299957 TMEM41BQ5BJD5 291 aa11.57□□□□□ -0.56
CASC4-201ENST00000299957 COL13A1Q5TAT6 717 aaPredicted RBP11.57□□□□□ -0.56
CASC4-201ENST00000299957 NANOS1Q8WY41 292 aaKnown RBP11.57□□□□□ -0.56
CASC4-201ENST00000299957 GNPNAT1Q96EK6 184 aaPredicted RBP11.57□□□□□ -0.56
CASC4-201ENST00000299957 WFIKKN1Q96NZ8 548 aa11.57□□□□□ -0.56
CASC4-201ENST00000299957 LOXL2Q9Y4K0 774 aa11.57□□□□□ -0.56
CASC4-201ENST00000299957 DNAH14Q0VDD8 3507 aa11.57□□□□□ -0.56
CASC4-201ENST00000299957 PSMB3P49720 205 aa11.57□□□□□ -0.56
CASC4-201ENST00000299957 ERVK-16P61578 105 aa11.57□□□□□ -0.56
CASC4-201ENST00000299957 HIKESHIQ53FT3 197 aa11.57□□□□□ -0.56
CASC4-201ENST00000299957 ZNF66Q6ZN08 573 aa11.57□□□□□ -0.56
CASC4-201ENST00000299957 ZNF705AQ6ZN79 300 aaPredicted RBP11.57□□□□□ -0.56
CASC4-201ENST00000299957 MARVELD3Q96A59 401 aa11.57□□□□□ -0.56
CASC4-201ENST00000299957 HES7Q9BYE0 225 aa11.57□□□□□ -0.56
CASC4-201ENST00000299957 FREM1Q5H8C1 2179 aa11.57□□□□□ -0.56
CASC4-201ENST00000299957 CDIPTO14735 213 aa11.57□□□□□ -0.56
CASC4-201ENST00000299957 PDGFBP01127 241 aaPredicted RBP11.57□□□□□ -0.56
CASC4-201ENST00000299957 CD8AP01732 235 aa11.57□□□□□ -0.56
CASC4-201ENST00000299957 S100A8P05109 93 aa11.57□□□□□ -0.56
CASC4-201ENST00000299957 ISG15P05161 165 aa11.57□□□□□ -0.56
CASC4-201ENST00000299957 MMP7P09237 267 aaPredicted RBP11.57□□□□□ -0.56
CASC4-201ENST00000299957 MSMO1Q15800 293 aa11.57□□□□□ -0.56
CASC4-201ENST00000299957 H2BFWTQ7Z2G1 175 aa11.57□□□□□ -0.56
CASC4-201ENST00000299957 POM121Q96HA1 1249 aa11.57□□□□□ -0.56
CASC4-201ENST00000299957 IL36RNQ9UBH0 155 aa11.57□□□□□ -0.56
CASC4-201ENST00000299957 TMED3Q9Y3Q3 217 aa11.57□□□□□ -0.56
CASC4-201ENST00000299957 KMT5CQ86Y97 462 aa11.56□□□□□ -0.56
CASC4-201ENST00000299957 ZNF610Q8N9Z0 462 aa11.56□□□□□ -0.56
CASC4-201ENST00000299957 STRAPQ9Y3F4 350 aaKnown RBP11.56□□□□□ -0.56
CASC4-201ENST00000299957 LRRK1Q38SD2 2015 aa11.56□□□□□ -0.56
CASC4-201ENST00000299957 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.56□□□□□ -0.56
CASC4-201ENST00000299957 NUDT19A8MXV4 375 aa11.56□□□□□ -0.56
CASC4-201ENST00000299957 VAX1Q5SQQ9 334 aa11.56□□□□□ -0.56
CASC4-201ENST00000299957 WDR25Q64LD2 544 aaPredicted RBP11.56□□□□□ -0.56
CASC4-201ENST00000299957 DHRS13Q6UX07 377 aa11.56□□□□□ -0.56
CASC4-201ENST00000299957 FAM185AQ8N0U4 392 aa11.56□□□□□ -0.56
CASC4-201ENST00000299957 OR4A4PQ8NGN8 299 aa11.56□□□□□ -0.56
CASC4-201ENST00000299957 RTBDNQ9BSG5 229 aaPredicted RBP11.56□□□□□ -0.56
CASC4-201ENST00000299957 PLXNA4Q9HCM2 1894 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms