RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 CLINT1Q14677 625 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 OR7A5Q15622 319 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 TAB1Q15750 504 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 HIST3H3Q16695 136 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 IZUMO4Q1ZYL8 232 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 LRRC75BQ2VPJ9 315 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 PYCR3Q53H96 274 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 TMEM97Q5BJF2 176 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 TFDP3Q5H9I0 405 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 HENMT1Q5T8I9 393 aaKnown RBP3.68□□□□□ -1.82
CD44-202ENST00000278385 ZNF57Q68EA5 555 aaPredicted RBP3.68□□□□□ -1.82
CD44-202ENST00000278385 FAM71E1Q6IPT2 247 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 C12orf54Q6X4T0 127 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 RFLNAQ6ZTI6 216 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 TMEM135Q86UB9 458 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 ZNF843Q8N446 348 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 PNKDQ8N490 385 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 ZADH2Q8N4Q0 377 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 OR52E4Q8NGH9 312 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 OR4C13Q8NGP0 309 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 OR10K1Q8NGX5 313 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 CCL4L1Q8NHW4 92 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 RNASE11Q8TAA1 199 aaKnown RBP3.68□□□□□ -1.82
CD44-202ENST00000278385 STOML3Q8TAV4 291 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 Q8WTZ3 238 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 EEF1AKMT1Q8WVE0 214 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 ZNRF4Q8WWF5 429 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 HAUS1Q96CS2 278 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 MAGEB18Q96M61 343 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 FAM218AQ96MZ4 157 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 PPP1R2P1Q96PQ5 205 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 DUX3Q96PT4 197 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 TRIB3Q96RU7 358 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 P2RX4Q99571 388 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 TSC22D3Q99576 134 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 MCHR1Q99705 422 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 RHNO1Q9BSD3 238 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 RIMS3Q9UJD0 308 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 OR52A1Q9UKL2 312 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 SLC22A7Q9Y694 548 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 TMEM56-RWDD3S4R434 201 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 PI4KAP42356 2102 aa3.68□□□□□ -1.82
CD44-202ENST00000278385 CACNA1EQ15878 2313 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 hCG_1818297A0A087WSY0 165 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 IGHV1OR21-1A0A087WYE8 117 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 A0A1W2PNU3 283 aaPredicted RBP3.67□□□□□ -1.82
CD44-202ENST00000278385 DAPL1A0PJW8 107 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 ZNF98A6NK75 572 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 NCBP2LA6PVI3 153 aaKnown RBP3.67□□□□□ -1.82
CD44-202ENST00000278385 B4DXG7 233 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 APOC4-APOC2K7ER74 178 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 GABRPO00591 440 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 BET1O15155 118 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 RGS14O43566 566 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 MGRN1O60291 552 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 PLIN3O60664 434 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 IGHV4-39P01824 125 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 APOC2P02655 101 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 CD55P08174 381 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 LIFP15018 202 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 PAX1P15863 534 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 TCP1P17987 556 aaKnown RBP3.67□□□□□ -1.82
CD44-202ENST00000278385 PRKACGP22612 351 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 FCGR2CP31995 323 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 PYCR1P32322 319 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 PDLIM4P50479 330 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 EFNA3P52797 238 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 CRYBA2P53672 197 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 TAS2R41P59536 307 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 ARG2P78540 354 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 MRPS11P82912 194 aaKnown RBP3.67□□□□□ -1.82
CD44-202ENST00000278385 FMODQ06828 376 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 LTB4RQ15722 352 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 TECRLQ5HYJ1 363 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.67□□□□□ -1.82
CD44-202ENST00000278385 UBE2UQ5VVX9 321 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 OLFML2AQ68BL7 652 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 KCTD16Q68DU8 428 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 ZNF774Q6NX45 483 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 C5orf46Q6UWT4 87 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 SKA3Q8IX90 412 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 SLC34A3Q8N130 599 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 STX19Q8N4C7 294 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 ZNF561Q8N587 486 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 UBL4BQ8N7F7 174 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 ZNF676Q8N7Q3 588 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 ARIH2OSQ8N7S6 290 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 GPR26Q8NDV2 337 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 OR2Z1Q8NG97 314 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 OR10G3Q8NGC4 313 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 OR2A1Q8NGT9 310 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 OR4C3Q8NH37 302 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 OR10A6Q8NH74 314 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 OR10G6Q8NH81 332 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 OR2T6Q8NHC8 308 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 KCTD4Q8WVF5 259 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 DDIT4LQ96D03 193 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 ZHX1-C8orf76Q96EF9 292 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 SMIM14Q96QK8 99 aa3.67□□□□□ -1.82
CD44-202ENST00000278385 SEC22CQ9BRL7 303 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms