RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 HAS2Q92819 552 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 SLAMF9Q96A28 289 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 MSI2Q96DH6 328 aaKnown RBP8.93□□□□□ -0.98
UPF3B-201ENST00000276201 C20orf24Q9BUV8 137 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 FBXO7Q9Y3I1 522 aa8.93□□□□□ -0.98
UPF3B-201ENST00000276201 ZNF726A6NNF4 738 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 ZNF587BE7ETH6 402 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 H3BQ15 152 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 HBE1P02100 147 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 SFTPDP35247 375 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 LSM6P62312 80 aaKnown RBP8.92□□□□□ -0.98
UPF3B-201ENST00000276201 ARG2P78540 354 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 TMEM176BQ3YBM2 270 aaPredicted RBP8.92□□□□□ -0.98
UPF3B-201ENST00000276201 PRR30Q53SZ7 412 aaPredicted RBP8.92□□□□□ -0.98
UPF3B-201ENST00000276201 SLC22A25Q6T423 547 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 FOXRED2Q8IWF2 684 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 AKR7LQ8NHP1 331 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 RBMXL1Q96E39 390 aaKnown RBP8.92□□□□□ -0.98
UPF3B-201ENST00000276201 TVP23CQ96ET8 276 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 C14orf144Q96I85 54 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 BOD1Q96IK1 185 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 SPACA5Q96QH8 159 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 DEFB126Q9BYW3 111 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 ZNF319Q9P2F9 582 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 C17orf51A8MQB3 221 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 YIF1AO95070 293 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 ZNF728P0DKX0 622 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 OR5H8P0DN80 308 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 NR2C1P13056 603 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 PPP1CCP36873 323 aaKnown RBP8.92□□□□□ -0.98
UPF3B-201ENST00000276201 TNFSF10P50591 281 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 NDUFA6P56556 154 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 MLF1P58340 268 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 RAB4BP61018 213 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 TLE1Q04724 770 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 UBE2V2Q15819 145 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 PLXDC2Q6UX71 529 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 ASCL4Q6XD76 172 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 FOXL2NBQ6ZUU3 175 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 RPS19BP1Q86WX3 136 aaKnown RBP8.92□□□□□ -0.98
UPF3B-201ENST00000276201 FAM185AQ8N0U4 392 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 RAB39BQ96DA2 213 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 MRGPRX4Q96LA9 322 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 MED29Q9NX70 200 aa8.92□□□□□ -0.98
UPF3B-201ENST00000276201 MCTS1Q9ULC4 181 aaKnown RBP8.92□□□□□ -0.98
UPF3B-201ENST00000276201 SPENQ96T58 3664 aaKnown RBP8.92□□□□□ -0.98
UPF3B-201ENST00000276201 HELZ2Q9BYK8 2649 aaKnown RBP8.91□□□□□ -0.98
UPF3B-201ENST00000276201 IGKV1D-8A0A087WSZ0 117 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 DUXBA0A1W2PPF3 345 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 OR5H15A6NDH6 313 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 GPR37O15354 613 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 HIST1H2BKO60814 126 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 HIST1H2BJP06899 126 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 OR13C7P0DN81 318 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 HIST1H2BOP23527 126 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 HIST1H2BBP33778 126 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 PIGPP57054 158 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 CLRN1P58418 232 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 HIST1H2BDP58876 126 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 HIST1H2BCP62807 126 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 HIST1H3AP68431 136 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 OR8B8Q15620 311 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 HIST2H2BEQ16778 126 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 ACSF3Q4G176 576 aaPredicted RBP8.91□□□□□ -0.98
UPF3B-201ENST00000276201 KHDC3LQ587J8 217 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 C9orf152Q5JTZ5 239 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.91□□□□□ -0.98
UPF3B-201ENST00000276201 UEVLDQ8IX04 471 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 CCDC71LQ8N9Z2 235 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 THAP3Q8WTV1 239 aaPredicted RBP8.91□□□□□ -0.98
UPF3B-201ENST00000276201 Q8WTZ3 238 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 MAFIPQ8WZ33 124 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 HIST1H2BHQ93079 126 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 GNPNAT1Q96EK6 184 aaPredicted RBP8.91□□□□□ -0.98
UPF3B-201ENST00000276201 HIST1H2BNQ99877 126 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 HIST1H2BMQ99879 126 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 C2orf88Q9BSF0 95 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 SLC25A31Q9H0C2 315 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 NELFAQ9H3P2 528 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 NBASA2RRP1 2371 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 FAM230AA0A1W2PPH8 454 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 PPP1R2P9O14990 202 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 SLC31A2O15432 143 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 HSPA12AO43301 675 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 TRAF3IP2O43734 574 aaPredicted RBP8.91□□□□□ -0.98
UPF3B-201ENST00000276201 DHRS3O75911 302 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 SCAF4O95104 1147 aaKnown RBP8.91□□□□□ -0.98
UPF3B-201ENST00000276201 TAGLN2P37802 199 aaKnown RBP8.91□□□□□ -0.98
UPF3B-201ENST00000276201 TAS2R60P59551 318 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 UBE2KP61086 200 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 EWSR1Q01844 656 aaKnown RBP eCLIP8.91□□□□□ -0.98
UPF3B-201ENST00000276201 PNRC1Q12796 327 aaPredicted RBP8.91□□□□□ -0.98
UPF3B-201ENST00000276201 GNMTQ14749 295 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 ZNF468Q5VIY5 522 aaPredicted RBP8.91□□□□□ -0.98
UPF3B-201ENST00000276201 FBXW12Q6X9E4 464 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 C16orf47Q6ZP98 133 aaPredicted RBP8.91□□□□□ -0.98
UPF3B-201ENST00000276201 C1QL2Q7Z5L3 287 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 STX12Q86Y82 276 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 FBXL14Q8N1E6 418 aa8.91□□□□□ -0.98
UPF3B-201ENST00000276201 OR14L1PQ8NHC6 308 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms