RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 HAND1O96004 215 aa10.2□□□□□ -0.78
SDE2-201ENST00000272091 GIPP09681 153 aaPredicted RBP10.2□□□□□ -0.78
SDE2-201ENST00000272091 CASP6P55212 293 aa10.2□□□□□ -0.78
SDE2-201ENST00000272091 ADIPOQQ15848 244 aa10.2□□□□□ -0.78
SDE2-201ENST00000272091 ZNF497Q6ZNH5 498 aa10.2□□□□□ -0.78
SDE2-201ENST00000272091 C9orf62Q8N4C0 152 aa10.2□□□□□ -0.78
SDE2-201ENST00000272091 GRPEL2Q8TAA5 225 aa10.2□□□□□ -0.78
SDE2-201ENST00000272091 ZFAND1Q8TCF1 268 aa10.2□□□□□ -0.78
SDE2-201ENST00000272091 FAM122AQ96E09 287 aa10.2□□□□□ -0.78
SDE2-201ENST00000272091 DBX1A6NMT0 343 aa10.2□□□□□ -0.78
SDE2-201ENST00000272091 FAM90A27PA6NNH2 459 aa10.2□□□□□ -0.78
SDE2-201ENST00000272091 SPRY3O43610 288 aa10.2□□□□□ -0.78
SDE2-201ENST00000272091 RCC1P18754 421 aaPredicted RBP10.2□□□□□ -0.78
SDE2-201ENST00000272091 LMO1P25800 156 aa10.2□□□□□ -0.78
SDE2-201ENST00000272091 ERP29P30040 261 aaKnown RBP10.2□□□□□ -0.78
SDE2-201ENST00000272091 RPS23P62266 143 aaKnown RBP10.2□□□□□ -0.78
SDE2-201ENST00000272091 SURF2Q15527 256 aaPredicted RBP10.2□□□□□ -0.78
SDE2-201ENST00000272091 NEK7Q8TDX7 302 aa10.2□□□□□ -0.78
SDE2-201ENST00000272091 POLEQ07864 2286 aa10.2□□□□□ -0.78
SDE2-201ENST00000272091 MAP1BP46821 2468 aaKnown RBP10.2□□□□□ -0.78
SDE2-201ENST00000272091 IGHV1-46P01743 117 aa10.2□□□□□ -0.78
SDE2-201ENST00000272091 TMEM128Q5BJH2 165 aa10.2□□□□□ -0.78
SDE2-201ENST00000272091 SHEQ5VZ18 495 aa10.2□□□□□ -0.78
SDE2-201ENST00000272091 LRRC29Q8WV35 223 aa10.2□□□□□ -0.78
SDE2-201ENST00000272091 OPN4Q9UHM6 478 aa10.2□□□□□ -0.78
SDE2-201ENST00000272091 RAI1Q7Z5J4 1906 aaPredicted RBP10.2□□□□□ -0.78
SDE2-201ENST00000272091 TRAV39A0A0B4J263 110 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 TMEM8BA6NDV4 472 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 SHISA9B4DS77 424 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 CD34P28906 385 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 FCGR2CP31995 323 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 IL13RA1P78552 427 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 PAN3Q58A45 887 aaKnown RBP10.19□□□□□ -0.78
SDE2-201ENST00000272091 ADAM5Q6NVV9 412 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 CLEC18BQ6UXF7 455 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 LDLRAD3Q86YD5 345 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 OR2T35Q8NGX2 323 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 ITLN1Q8WWA0 313 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 OR14J1Q9UGF5 321 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 ATP23Q9Y6H3 246 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 TRDCB7Z8K6 153 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 CCSO14618 274 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 AADACP22760 399 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 NFYAP23511 347 aaPredicted RBP10.19□□□□□ -0.78
SDE2-201ENST00000272091 CHRNB4P30926 498 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 TAS2R31P59538 309 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 GCSAMQ8N6F7 178 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 CD177Q8N6Q3 437 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 NEUROG1Q92886 237 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 ERVH48-1M5A8F1 160 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 SH2D1BO14796 132 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 SIAH2O43255 324 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 SLC22A5O76082 557 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 SFT2D2O95562 160 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 DUS4LO95620 317 aaKnown RBP10.19□□□□□ -0.78
SDE2-201ENST00000272091 ATXN7L3Q14CW9 347 aaPredicted RBP10.19□□□□□ -0.78
SDE2-201ENST00000272091 ANKRD55Q3KP44 614 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 NCMAPQ5T1S8 102 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 MOB3AQ96BX8 217 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 HYLS1Q96M11 299 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 TREM2Q9NZC2 230 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 MGAT4AQ9UM21 535 aa10.19□□□□□ -0.78
SDE2-201ENST00000272091 FAM172BPA6NC97 362 aa10.18□□□□□ -0.78
SDE2-201ENST00000272091 SRRM5B3KS81 715 aa10.18□□□□□ -0.78
SDE2-201ENST00000272091 LHBP01229 141 aa10.18□□□□□ -0.78
SDE2-201ENST00000272091 SFTPCP11686 197 aa10.18□□□□□ -0.78
SDE2-201ENST00000272091 VAMP1P23763 118 aa10.18□□□□□ -0.78
SDE2-201ENST00000272091 RBM39Q14498 530 aaKnown RBP10.18□□□□□ -0.78
SDE2-201ENST00000272091 MOGAT3Q86VF5 341 aa10.18□□□□□ -0.78
SDE2-201ENST00000272091 TGIF2LYQ8IUE0 185 aa10.18□□□□□ -0.78
SDE2-201ENST00000272091 OR5M8Q8NGP6 311 aa10.18□□□□□ -0.78
SDE2-201ENST00000272091 CASTOR1Q8WTX7 329 aa10.18□□□□□ -0.78
SDE2-201ENST00000272091 CTSDP07339 412 aaPredicted RBP10.18□□□□□ -0.78
SDE2-201ENST00000272091 CFHR2P36980 270 aa10.18□□□□□ -0.78
SDE2-201ENST00000272091 ZNF81P51508 661 aa10.18□□□□□ -0.78
SDE2-201ENST00000272091 SRSF4Q08170 494 aaKnown RBP10.18□□□□□ -0.78
SDE2-201ENST00000272091 PRR7Q8TB68 274 aa10.18□□□□□ -0.78
SDE2-201ENST00000272091 RANBP3Q9H6Z4 567 aaPredicted RBP10.18□□□□□ -0.78
SDE2-201ENST00000272091 HCFC1P51610 2035 aa10.18□□□□□ -0.78
SDE2-201ENST00000272091 hCG_1807616A0A1W2PRN6 198 aa10.18□□□□□ -0.78
SDE2-201ENST00000272091 KNG1P01042 644 aa10.18□□□□□ -0.78
SDE2-201ENST00000272091 PGAM2P15259 253 aa10.18□□□□□ -0.78
SDE2-201ENST00000272091 DNASE1P24855 282 aa10.18□□□□□ -0.78
SDE2-201ENST00000272091 GATA4P43694 442 aa10.18□□□□□ -0.78
SDE2-201ENST00000272091 SLC9A3R2Q15599 337 aa10.18□□□□□ -0.78
SDE2-201ENST00000272091 LILRB4Q8NHJ6 448 aa10.18□□□□□ -0.78
SDE2-201ENST00000272091 LINC01560Q8TB33 94 aa10.18□□□□□ -0.78
SDE2-201ENST00000272091 COQ2Q96H96 371 aa10.18□□□□□ -0.78
SDE2-201ENST00000272091 RIMS4Q9H426 269 aaPredicted RBP10.18□□□□□ -0.78
SDE2-201ENST00000272091 RFPL4AA6NLU0 287 aa10.17□□□□□ -0.78
SDE2-201ENST00000272091 RFPL4AL1F8VTS6 287 aa10.17□□□□□ -0.78
SDE2-201ENST00000272091 OR4A8P0C604 315 aa10.17□□□□□ -0.78
SDE2-201ENST00000272091 HLA-GP17693 338 aa10.17□□□□□ -0.78
SDE2-201ENST00000272091 MDH2P40926 338 aaKnown RBP10.17□□□□□ -0.78
SDE2-201ENST00000272091 OR3A1P47881 315 aa10.17□□□□□ -0.78
SDE2-201ENST00000272091 RAP2BP61225 183 aa10.17□□□□□ -0.78
SDE2-201ENST00000272091 SNRPD2P62316 118 aaKnown RBP10.17□□□□□ -0.78
SDE2-201ENST00000272091 HLA-DRB3P79483 266 aa10.17□□□□□ -0.78
SDE2-201ENST00000272091 C6orf183Q5T699 404 aa10.17□□□□□ -0.78
SDE2-201ENST00000272091 OR10Z1Q8NGY1 313 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms