RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 GAPTQ8N292 157 aa12.23□□□□□ -0.45
CDH3-201ENST00000264012 OR11H7Q8NGC8 314 aa12.23□□□□□ -0.45
CDH3-201ENST00000264012 MMP26Q9NRE1 261 aa12.23□□□□□ -0.45
CDH3-201ENST00000264012 SLC2A9Q9NRM0 540 aa12.23□□□□□ -0.45
CDH3-201ENST00000264012 ZNF835Q9Y2P0 537 aa12.23□□□□□ -0.45
CDH3-201ENST00000264012 V9GYS6 101 aa12.23□□□□□ -0.45
CDH3-201ENST00000264012 TMPRSS2O15393 492 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 NKX2-8O15522 239 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 VDAC1P21796 283 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 PMELP40967 661 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 FFAR4Q5NUL3 377 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 RPL7L1Q6DKI1 246 aaKnown RBP12.22□□□□□ -0.45
CDH3-201ENST00000264012 LAIR2Q6ISS4 152 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 ETV3LQ6ZN32 361 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 OR2J1Q9GZK6 312 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 CHRNA10Q9GZZ6 450 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 MSL2Q9HCI7 577 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 LCTP09848 1927 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 TIAF1O95411 115 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 FGF2P09038 288 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 SP9P0CG40 484 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 COX7A1P24310 79 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 AKR1C3P42330 323 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 CLEC12BQ2HXU8 276 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 SLC25A47Q6Q0C1 308 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 CD200R1LQ6Q8B3 271 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 BTNL3Q6UXE8 466 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 CCL28Q9NRJ3 127 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 OOEPA6NGQ2 149 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 IGF2P01344 180 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 COX6A1P12074 109 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 MRPS11P82912 194 aaKnown RBP12.22□□□□□ -0.45
CDH3-201ENST00000264012 SPINK9Q5DT21 86 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 SCMH1Q96GD3 660 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 ZMIZ1Q9ULJ6 1067 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 KIR2DS2P43631 304 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 SEZ6L2Q6UXD5 910 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 OR5B3Q8NH48 314 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 DYRK2Q92630 601 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 GPR137Q96N19 417 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 MRPL22Q9NWU5 206 aaKnown RBP12.22□□□□□ -0.45
CDH3-201ENST00000264012 TREM2Q9NZC2 230 aa12.22□□□□□ -0.45
CDH3-201ENST00000264012 TRAV39A0A0B4J263 110 aa12.21□□□□□ -0.45
CDH3-201ENST00000264012 PCOLCEQ15113 449 aa12.21□□□□□ -0.45
CDH3-201ENST00000264012 SAP30LQ9HAJ7 183 aa12.21□□□□□ -0.45
CDH3-201ENST00000264012 GZMHP20718 246 aa12.21□□□□□ -0.45
CDH3-201ENST00000264012 TGIF1Q15583 401 aa12.21□□□□□ -0.45
CDH3-201ENST00000264012 PDZD11Q5EBL8 140 aa12.21□□□□□ -0.45
CDH3-201ENST00000264012 SLC23A3Q6PIS1 610 aa12.21□□□□□ -0.45
CDH3-201ENST00000264012 MOB3AQ96BX8 217 aa12.21□□□□□ -0.45
CDH3-201ENST00000264012 RAB1BQ9H0U4 201 aa12.21□□□□□ -0.45
CDH3-201ENST00000264012 WSB1Q9Y6I7 421 aa12.21□□□□□ -0.45
CDH3-201ENST00000264012 A0A1W2PPQ1 181 aa12.21□□□□□ -0.45
CDH3-201ENST00000264012 CA11O75493 328 aa12.21□□□□□ -0.45
CDH3-201ENST00000264012 HOGA1Q86XE5 327 aa12.21□□□□□ -0.45
CDH3-201ENST00000264012 HDHD3Q9BSH5 251 aaPredicted RBP12.21□□□□□ -0.45
CDH3-201ENST00000264012 RNF7Q9UBF6 113 aa12.21□□□□□ -0.45
CDH3-201ENST00000264012 HLA-DQB1P01920 261 aa12.21□□□□□ -0.46
CDH3-201ENST00000264012 NAT1P18440 290 aa12.21□□□□□ -0.46
CDH3-201ENST00000264012 OPRK1P41145 380 aa12.21□□□□□ -0.46
CDH3-201ENST00000264012 STPG2Q8N412 459 aa12.21□□□□□ -0.46
CDH3-201ENST00000264012 OR4S2Q8NH73 311 aa12.21□□□□□ -0.46
CDH3-201ENST00000264012 LHFPL5Q8TAF8 219 aa12.21□□□□□ -0.46
CDH3-201ENST00000264012 RAB1CQ92928 201 aa12.21□□□□□ -0.46
CDH3-201ENST00000264012 MRPL24Q96A35 216 aaKnown RBP12.21□□□□□ -0.46
CDH3-201ENST00000264012 ADTRPQ96IZ2 230 aa12.21□□□□□ -0.46
CDH3-201ENST00000264012 A0A1W2PNV4 684 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 MED19A0JLT2 244 aaPredicted RBP12.2□□□□□ -0.46
CDH3-201ENST00000264012 SYNGR2O43760 224 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 FOSL1P15407 271 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 PHYHD1Q5SRE7 291 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 FAM214BQ7L5A3 538 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 NEIL1Q96FI4 390 aaPredicted RBP12.2□□□□□ -0.46
CDH3-201ENST00000264012 TXN2Q99757 166 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 KLK13Q9UKR3 277 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 RALGAPA2Q2PPJ7 1873 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 C7orf66A4D0T2 115 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 MAP1LC3B2A6NCE7 125 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 C16orf97H3BN30 126 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 IGLV3-19P01714 112 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 HLA-DRB3P79483 266 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 TEX30Q5JUR7 227 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 PRR27Q6MZM9 219 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 ADAD2Q8NCV1 583 aaKnown RBP12.2□□□□□ -0.46
CDH3-201ENST00000264012 FGF11Q92914 225 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 MAP1LC3BQ9GZQ8 125 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 FKBP11Q9NYL4 201 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 NCOR1O75376 2440 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 C17orf51A8MQB3 221 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 CRYBA2P53672 197 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 PRRX1P54821 245 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 ZNF429Q86V71 674 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 OR4D10Q8NGI6 311 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 RPL36A-HNRNPH2H7BZ11 118 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 OPN1MWP04001 364 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 OPN1MW2P0DN77 364 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 OPN1MW3P0DN78 364 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 RBM11P57052 281 aaKnown RBP12.2□□□□□ -0.46
CDH3-201ENST00000264012 IL24Q13007 206 aa12.2□□□□□ -0.46
CDH3-201ENST00000264012 ZNF519Q8TB69 540 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms