RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 DUX1O43812 170 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 CHST1O43916 411 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 GPR137BO60478 399 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 PRF1P14222 555 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 SELEP16581 610 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 NKX2-1P43699 371 aaPredicted RBP11.22□□□□□ -0.61
SNX1-201ENST00000261889 VAMP2P63027 116 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 ZNF92Q03936 586 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 SPINK9Q5DT21 86 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 SPSB3Q6PJ21 355 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 LIAT1Q6ZQX7 453 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 TBC1D26Q86UD7 250 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 GPR27Q9NS67 375 aa11.22□□□□□ -0.61
SNX1-201ENST00000261889 MMP7P09237 267 aaPredicted RBP11.21□□□□□ -0.61
SNX1-201ENST00000261889 TRGC1P0CF51 173 aa11.21□□□□□ -0.61
SNX1-201ENST00000261889 ZNF32P17041 273 aa11.21□□□□□ -0.61
SNX1-201ENST00000261889 TESK1Q15569 626 aa11.21□□□□□ -0.61
SNX1-201ENST00000261889 RNF212Q495C1 297 aa11.21□□□□□ -0.61
SNX1-201ENST00000261889 ZNF818PQ6ZRF7 136 aa11.21□□□□□ -0.61
SNX1-201ENST00000261889 SSX7Q7RTT5 188 aa11.21□□□□□ -0.61
SNX1-201ENST00000261889 RDH5Q92781 318 aa11.21□□□□□ -0.61
SNX1-201ENST00000261889 METTL9Q9H1A3 318 aa11.21□□□□□ -0.61
SNX1-201ENST00000261889 A0A1B0GUS0 222 aa11.21□□□□□ -0.62
SNX1-201ENST00000261889 ARGFXA6NJG6 315 aa11.21□□□□□ -0.62
SNX1-201ENST00000261889 FOXI3A8MTJ6 420 aaPredicted RBP11.21□□□□□ -0.62
SNX1-201ENST00000261889 KIAA1324LA8MWY0 1029 aaPredicted RBP11.21□□□□□ -0.62
SNX1-201ENST00000261889 SCGNO76038 276 aa11.21□□□□□ -0.62
SNX1-201ENST00000261889 FOLR2P14207 255 aa11.21□□□□□ -0.62
SNX1-201ENST00000261889 CD33P20138 364 aa11.21□□□□□ -0.62
SNX1-201ENST00000261889 APLNRP35414 380 aa11.21□□□□□ -0.62
SNX1-201ENST00000261889 ZP4Q12836 540 aa11.21□□□□□ -0.62
SNX1-201ENST00000261889 BOD1Q96IK1 185 aa11.21□□□□□ -0.62
SNX1-201ENST00000261889 SRXN1Q9BYN0 137 aa11.21□□□□□ -0.62
SNX1-201ENST00000261889 TUBD1Q9UJT1 453 aa11.21□□□□□ -0.62
SNX1-201ENST00000261889 ARFGEF3Q5TH69 2177 aa11.21□□□□□ -0.62
SNX1-201ENST00000261889 LMO7DNF2Z398 122 aa11.2□□□□□ -0.62
SNX1-201ENST00000261889 K7N7A8 449 aa11.2□□□□□ -0.62
SNX1-201ENST00000261889 CD63P08962 238 aa11.2□□□□□ -0.62
SNX1-201ENST00000261889 PLXDC1Q8IUK5 500 aa11.2□□□□□ -0.62
SNX1-201ENST00000261889 ZNF610Q8N9Z0 462 aa11.2□□□□□ -0.62
SNX1-201ENST00000261889 OR2M3Q8NG83 312 aa11.2□□□□□ -0.62
SNX1-201ENST00000261889 ABHD5Q8WTS1 349 aa11.2□□□□□ -0.62
SNX1-201ENST00000261889 ZNF845Q96IR2 970 aaPredicted RBP11.2□□□□□ -0.62
SNX1-201ENST00000261889 OXGR1Q96P68 337 aa11.2□□□□□ -0.62
SNX1-201ENST00000261889 PBDC1Q9BVG4 233 aa11.2□□□□□ -0.62
SNX1-201ENST00000261889 MRPS17Q9Y2R5 130 aaKnown RBP11.2□□□□□ -0.62
SNX1-201ENST00000261889 C3orf85A0A1B0GTC6 90 aa11.2□□□□□ -0.62
SNX1-201ENST00000261889 LILRA5A6NI73 299 aa11.2□□□□□ -0.62
SNX1-201ENST00000261889 CEACAM18A8MTB9 384 aa11.2□□□□□ -0.62
SNX1-201ENST00000261889 TRAPPC6AO75865 159 aa11.2□□□□□ -0.62
SNX1-201ENST00000261889 IFI6P09912 130 aa11.2□□□□□ -0.62
SNX1-201ENST00000261889 METTL15P1P0C7V9 234 aa11.2□□□□□ -0.62
SNX1-201ENST00000261889 EGR1P18146 543 aa11.2□□□□□ -0.62
SNX1-201ENST00000261889 NKX6-1P78426 367 aaPredicted RBP11.2□□□□□ -0.62
SNX1-201ENST00000261889 CMTM1Q8IZ96 169 aa11.2□□□□□ -0.62
SNX1-201ENST00000261889 MAML2Q8IZL2 1156 aaPredicted RBP11.2□□□□□ -0.62
SNX1-201ENST00000261889 TMEM252Q8N6L7 170 aa11.2□□□□□ -0.62
SNX1-201ENST00000261889 NFAM1Q8NET5 270 aaPredicted RBP11.2□□□□□ -0.62
SNX1-201ENST00000261889 GJC3Q8NFK1 279 aa11.2□□□□□ -0.62
SNX1-201ENST00000261889 CPNE4Q96A23 557 aaPredicted RBP11.2□□□□□ -0.62
SNX1-201ENST00000261889 GAB2Q9UQC2 676 aa11.2□□□□□ -0.62
SNX1-201ENST00000261889 NUDT19A8MXV4 375 aa11.2□□□□□ -0.62
SNX1-201ENST00000261889 DHHO43323 396 aa11.2□□□□□ -0.62
SNX1-201ENST00000261889 PIAS2O75928 621 aa11.2□□□□□ -0.62
SNX1-201ENST00000261889 PPYP01298 95 aa11.2□□□□□ -0.62
SNX1-201ENST00000261889 FOXG1P55316 489 aaPredicted RBP11.2□□□□□ -0.62
SNX1-201ENST00000261889 ERVS71-1P61550 626 aa11.2□□□□□ -0.62
SNX1-201ENST00000261889 SPEM1Q8N4L4 309 aa11.2□□□□□ -0.62
SNX1-201ENST00000261889 OR14L1PQ8NHC6 308 aa11.2□□□□□ -0.62
SNX1-201ENST00000261889 OCIAD1Q9NX40 245 aa11.2□□□□□ -0.62
SNX1-201ENST00000261889 ABCA1O95477 2261 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 GAPDHP04406 335 aaKnown RBP11.19□□□□□ -0.62
SNX1-201ENST00000261889 SEC11BP0C7V7 166 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 HNRNPKP61978 463 aaKnown RBP eCLIP11.19□□□□□ -0.627e-7■■■■□ 26.4
SNX1-201ENST00000261889 HIST2H3PS2Q5TEC6 136 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 OR6X1Q8NH79 312 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 GATAD1Q8WUU5 269 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 PLPPR2Q96GM1 343 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 C14orf144Q96I85 54 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 SGCZQ96LD1 299 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 ANAPC10Q9UM13 185 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 CSMD1Q96PZ7 3565 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 CNOT1A5YKK6 2376 aaKnown RBP11.19□□□□□ -0.62
SNX1-201ENST00000261889 EP300Q09472 2414 aaPredicted RBP11.19□□□□□ -0.62
SNX1-201ENST00000261889 MED12LQ86YW9 2145 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 TECTAO75443 2155 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 A0A0J9YW62 118 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 BLACEA4D250 179 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 SLC34A2O95436 690 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 NRASP01111 189 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 ICAM4Q14773 271 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 AKR1C8PQ5T2L2 129 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 FIP1L1Q6UN15 594 aaKnown RBP11.19□□□□□ -0.62
SNX1-201ENST00000261889 D2HGDHQ8N465 521 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 PLPP5Q8NEB5 264 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 SSC4DQ8WTU2 575 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 RPUSD4Q96CM3 377 aaKnown RBP11.19□□□□□ -0.62
SNX1-201ENST00000261889 GINS3Q9BRX5 216 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 PLEKHA2Q9HB19 425 aa11.19□□□□□ -0.62
SNX1-201ENST00000261889 MGAQ8IWI9 3026 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms