RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 SAXO1Q8IYX7 474 aa13.08□□□□□ -0.32
DDX56-201ENST00000258772 ZNF565Q8N9K5 539 aa13.08□□□□□ -0.32
DDX56-201ENST00000258772 FAM213BQ8TBF2 198 aa13.08□□□□□ -0.32
DDX56-201ENST00000258772 LINC00470Q9BZP3 86 aa13.08□□□□□ -0.32
DDX56-201ENST00000258772 SLC35B3Q9H1N7 401 aa13.08□□□□□ -0.32
DDX56-201ENST00000258772 FBXO7Q9Y3I1 522 aa13.08□□□□□ -0.32
DDX56-201ENST00000258772 ZNF407Q9C0G0 2248 aa13.08□□□□□ -0.32
DDX56-201ENST00000258772 PCSK5Q92824 1860 aa13.08□□□□□ -0.32
DDX56-201ENST00000258772 C1orf196B1AJZ1 125 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 UMAD1C9J7I0 102 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 MT-ND4LP03901 98 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 ZNF16P17020 682 aaPredicted RBP13.07□□□□□ -0.32
DDX56-201ENST00000258772 PPP1CCP36873 323 aaKnown RBP13.07□□□□□ -0.32
DDX56-201ENST00000258772 SRYQ05066 204 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 ZNF266Q14584 549 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 HERPUD1Q15011 391 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 CEACAM21Q3KPI0 293 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 GAPTQ8N292 157 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 CT55Q8WUE5 264 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 SPIN2AQ99865 258 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 SPIN2BQ9BPZ2 258 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 C20orf24Q9BUV8 137 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 PRRG4Q9BZD6 226 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 PLEKHF2Q9H8W4 249 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 MTCH1Q9NZJ7 389 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 FRYLO94915 3013 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 TNRC6AQ8NDV7 1962 aaKnown RBP13.07□□□□□ -0.32
DDX56-201ENST00000258772 C5orf49A4QMS7 147 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 SLC22A20A6NK97 555 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 PRSS44E7EML9 344 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 HLA-HP01893 362 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 DAOP14920 347 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 MEOX2P50222 304 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 SNRPEP62304 92 aaKnown RBP13.07□□□□□ -0.32
DDX56-201ENST00000258772 C6orf15Q6UXA7 325 aaPredicted RBP13.07□□□□□ -0.32
DDX56-201ENST00000258772 LFNGQ8NES3 379 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 ISOC2Q96AB3 205 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 GPHA2Q96T91 129 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 KCNJ16Q9NPI9 418 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 LRFN1Q9P244 771 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 IL36RNQ9UBH0 155 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 BOKQ9UMX3 212 aaPredicted RBP13.07□□□□□ -0.32
DDX56-201ENST00000258772 RFNGQ9Y644 331 aa13.07□□□□□ -0.32
DDX56-201ENST00000258772 IGKV1D-13A0A0B4J2D9 117 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 A0A1B0GV50 99 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 A0A1B0GW64 132 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 ZNF724A8MTY0 619 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 ZNF732B4DXR9 585 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 LINC01387J3KSC0 135 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 ADAM20O43506 726 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 TUSC2O75896 110 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 PDGFBP01127 241 aaPredicted RBP13.06□□□□□ -0.32
DDX56-201ENST00000258772 IGKV1-13P0DP09 117 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 OMGP23515 440 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 ATP6V0CP27449 155 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 CXorf66Q5JRM2 361 aaPredicted RBP13.06□□□□□ -0.32
DDX56-201ENST00000258772 ALKBH2Q6NS38 261 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 ZDHHC23Q8IYP9 409 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 TMEM252Q8N6L7 170 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 OR2G3Q8NGZ4 309 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 LILRB1Q8NHL6 650 aaPredicted RBP13.06□□□□□ -0.32
DDX56-201ENST00000258772 MAGT1Q9H0U3 335 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 PRO3102Q9H379 93 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 PRDM6Q9NQX0 595 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 LYRM2Q9NU23 88 aaPredicted RBP13.06□□□□□ -0.32
DDX56-201ENST00000258772 CLEC18AA5D8T8 446 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 PROB1E7EW31 1015 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 SSSCA1O60232 199 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 PITX3O75364 302 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 LHX2P50458 406 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 FOXG1P55316 489 aaPredicted RBP13.06□□□□□ -0.32
DDX56-201ENST00000258772 TSC22D1Q15714 1073 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 MRPL21Q7Z2W9 205 aaKnown RBP13.06□□□□□ -0.32
DDX56-201ENST00000258772 TUSC5Q8IXB3 177 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 ZNF561Q8N587 486 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 CLEC18CQ8NCF0 446 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 TMEM171Q8WVE6 324 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 ABHD14BQ96IU4 210 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 TAAR9Q96RI9 348 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 SLC25A31Q9H0C2 315 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 CCL28Q9NRJ3 127 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 DNAJC13O75165 2243 aa13.06□□□□□ -0.32
DDX56-201ENST00000258772 OR13C7P0DN81 318 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 UCP1P25874 307 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 MPV17LQ2QL34 196 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 NMSQ5H8A3 153 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 OR1J1Q8NGS3 322 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 APOBEC3DQ96AK3 386 aaPredicted RBP13.05□□□□□ -0.32
DDX56-201ENST00000258772 THOC3Q96J01 351 aaKnown RBP13.05□□□□□ -0.32
DDX56-201ENST00000258772 ABHD14AQ9BUJ0 271 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 ZMAT5Q9UDW3 170 aaKnown RBP13.05□□□□□ -0.32
DDX56-201ENST00000258772 ATP23Q9Y6H3 246 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 DOCK7Q96N67 2140 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 IGKV1-6A0A0C4DH72 117 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 KIR2DS1A0A191URI9 304 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 DUXBA0A1W2PPF3 345 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 ZNF503-AS2A6NEH8 195 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 C5orf52A6NGY3 159 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 TRAPPC2LH3BP13 241 aa13.05□□□□□ -0.32
DDX56-201ENST00000258772 HSPB6O14558 160 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms