RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 CGAP01215 116 aa9.88□□□□□ -0.83
LIN28A-201ENST00000254231 CSF1P09603 554 aa9.88□□□□□ -0.83
LIN28A-201ENST00000254231 FUT3P21217 361 aa9.88□□□□□ -0.83
LIN28A-201ENST00000254231 GLIPR1P48060 266 aa9.88□□□□□ -0.83
LIN28A-201ENST00000254231 HIST1H3AP68431 136 aa9.88□□□□□ -0.83
LIN28A-201ENST00000254231 C1orf100Q5SVJ3 147 aa9.88□□□□□ -0.83
LIN28A-201ENST00000254231 HIST2H3PS2Q5TEC6 136 aa9.88□□□□□ -0.83
LIN28A-201ENST00000254231 HACD4Q5VWC8 232 aa9.88□□□□□ -0.83
LIN28A-201ENST00000254231 HIST2H3AQ71DI3 136 aa9.88□□□□□ -0.83
LIN28A-201ENST00000254231 SUMF2Q8NBJ7 301 aa9.88□□□□□ -0.83
LIN28A-201ENST00000254231 ST8SIA4Q92187 359 aa9.88□□□□□ -0.83
LIN28A-201ENST00000254231 NARS2Q96I59 477 aaKnown RBP9.88□□□□□ -0.83
LIN28A-201ENST00000254231 TECTBQ96PL2 329 aa9.88□□□□□ -0.83
LIN28A-201ENST00000254231 PLSCR2Q9NRY7 297 aa9.88□□□□□ -0.83
LIN28A-201ENST00000254231 TMEM14DPA8MWL7 114 aa9.88□□□□□ -0.83
LIN28A-201ENST00000254231 PTBP3O95758 552 aaKnown RBP9.88□□□□□ -0.83
LIN28A-201ENST00000254231 CD3EP07766 207 aa9.88□□□□□ -0.83
LIN28A-201ENST00000254231 FSTP19883 344 aa9.88□□□□□ -0.83
LIN28A-201ENST00000254231 TIMP3P35625 211 aa9.88□□□□□ -0.83
LIN28A-201ENST00000254231 KLF9Q13886 244 aaPredicted RBP9.88□□□□□ -0.83
LIN28A-201ENST00000254231 ZNF565Q8N9K5 539 aa9.88□□□□□ -0.83
LIN28A-201ENST00000254231 OR5P3Q8WZ94 311 aa9.88□□□□□ -0.83
LIN28A-201ENST00000254231 DNTTIP1Q9H147 329 aa9.88□□□□□ -0.83
LIN28A-201ENST00000254231 SAP30LQ9HAJ7 183 aa9.88□□□□□ -0.83
LIN28A-201ENST00000254231 GNG12Q9UBI6 72 aa9.88□□□□□ -0.83
LIN28A-201ENST00000254231 PCDHB10Q9UN67 800 aa9.88□□□□□ -0.83
LIN28A-201ENST00000254231 OR3A1P47881 315 aa9.87□□□□□ -0.83
LIN28A-201ENST00000254231 OR8G5Q8NG78 346 aa9.87□□□□□ -0.83
LIN28A-201ENST00000254231 RGCCQ9H4X1 137 aa9.87□□□□□ -0.83
LIN28A-201ENST00000254231 COPZ2Q9P299 210 aa9.87□□□□□ -0.83
LIN28A-201ENST00000254231 PRSS44E7EML9 344 aa9.87□□□□□ -0.83
LIN28A-201ENST00000254231 M0R233 179 aa9.87□□□□□ -0.83
LIN28A-201ENST00000254231 OR2H2O95918 312 aa9.87□□□□□ -0.83
LIN28A-201ENST00000254231 SLC6A1P30531 599 aa9.87□□□□□ -0.83
LIN28A-201ENST00000254231 GNRHRP30968 328 aa9.87□□□□□ -0.83
LIN28A-201ENST00000254231 SSTR5P35346 364 aa9.87□□□□□ -0.83
LIN28A-201ENST00000254231 FBXW12Q6X9E4 464 aa9.87□□□□□ -0.83
LIN28A-201ENST00000254231 C20orf204Q6ZNR8 217 aa9.87□□□□□ -0.83
LIN28A-201ENST00000254231 MUC20Q8N307 709 aaPredicted RBP9.87□□□□□ -0.83
LIN28A-201ENST00000254231 FAM216BQ8N7L0 139 aa9.87□□□□□ -0.83
LIN28A-201ENST00000254231 LIME1Q9H400 295 aa9.87□□□□□ -0.83
LIN28A-201ENST00000254231 ARPC5O15511 151 aa9.87□□□□□ -0.83
LIN28A-201ENST00000254231 PPIHO43447 177 aaKnown RBP9.87□□□□□ -0.83
LIN28A-201ENST00000254231 ECDO95905 644 aaPredicted RBP9.87□□□□□ -0.83
LIN28A-201ENST00000254231 CHRM2P08172 466 aa9.87□□□□□ -0.83
LIN28A-201ENST00000254231 RBM11P57052 281 aaKnown RBP9.87□□□□□ -0.83
LIN28A-201ENST00000254231 C2orf68Q2NKX9 166 aa9.87□□□□□ -0.83
LIN28A-201ENST00000254231 ZSCAN4Q8NAM6 433 aaPredicted RBP9.87□□□□□ -0.83
LIN28A-201ENST00000254231 PARP12Q9H0J9 701 aaKnown RBP9.87□□□□□ -0.83
LIN28A-201ENST00000254231 ANKRD20A5PA0PJZ0 165 aa9.86□□□□□ -0.83
LIN28A-201ENST00000254231 CREBL2O60519 120 aaPredicted RBP9.86□□□□□ -0.83
LIN28A-201ENST00000254231 PSPNO60542 156 aa9.86□□□□□ -0.83
LIN28A-201ENST00000254231 PRF1P14222 555 aa9.86□□□□□ -0.83
LIN28A-201ENST00000254231 EGR1P18146 543 aa9.86□□□□□ -0.83
LIN28A-201ENST00000254231 OR5A2Q8NGI9 324 aa9.86□□□□□ -0.83
LIN28A-201ENST00000254231 CPNE2Q96FN4 548 aaPredicted RBP9.86□□□□□ -0.83
LIN28A-201ENST00000254231 C1orf147Q96MC9 270 aaPredicted RBP9.86□□□□□ -0.83
LIN28A-201ENST00000254231 SESN1Q9Y6P5 492 aa9.86□□□□□ -0.83
LIN28A-201ENST00000254231 ICMTO60725 284 aa9.86□□□□□ -0.83
LIN28A-201ENST00000254231 IGKV3-15P01624 115 aa9.86□□□□□ -0.83
LIN28A-201ENST00000254231 RAC2P15153 192 aa9.86□□□□□ -0.83
LIN28A-201ENST00000254231 SERPINF1P36955 418 aa9.86□□□□□ -0.83
LIN28A-201ENST00000254231 COL10A1Q03692 680 aa9.86□□□□□ -0.83
LIN28A-201ENST00000254231 PPP1R1AQ13522 171 aa9.86□□□□□ -0.83
LIN28A-201ENST00000254231 FOXL2NBQ6ZUU3 175 aa9.86□□□□□ -0.83
LIN28A-201ENST00000254231 GPX8Q8TED1 209 aa9.86□□□□□ -0.83
LIN28A-201ENST00000254231 NTNG2Q96CW9 530 aa9.86□□□□□ -0.83
LIN28A-201ENST00000254231 SMIM3Q9BZL3 60 aa9.86□□□□□ -0.83
LIN28A-201ENST00000254231 OR2S2Q9NQN1 319 aa9.86□□□□□ -0.83
LIN28A-201ENST00000254231 OR1A1Q9P1Q5 309 aa9.86□□□□□ -0.83
LIN28A-201ENST00000254231 NUP50Q9UKX7 468 aa9.86□□□□□ -0.83
LIN28A-201ENST00000254231 PDCD6O75340 191 aa9.86□□□□□ -0.83
LIN28A-201ENST00000254231 CRYZL1O95825 349 aa9.86□□□□□ -0.83
LIN28A-201ENST00000254231 VSIG10L2P0DP72 767 aa9.86□□□□□ -0.83
LIN28A-201ENST00000254231 BTCP35070 178 aa9.86□□□□□ -0.83
LIN28A-201ENST00000254231 FBN2P35556 2912 aa9.86□□□□□ -0.83
LIN28A-201ENST00000254231 PLA2G5P39877 138 aa9.86□□□□□ -0.83
LIN28A-201ENST00000254231 RBMS2Q15434 407 aaKnown RBP9.86□□□□□ -0.83
LIN28A-201ENST00000254231 RPUSD3Q6P087 351 aaKnown RBP9.86□□□□□ -0.83
LIN28A-201ENST00000254231 ARL11Q969Q4 196 aa9.86□□□□□ -0.83
LIN28A-201ENST00000254231 CD24P25063 80 aa9.85□□□□□ -0.83
LIN28A-201ENST00000254231 AQP3Q92482 292 aa9.85□□□□□ -0.83
LIN28A-201ENST00000254231 VKORC1Q9BQB6 163 aa9.85□□□□□ -0.83
LIN28A-201ENST00000254231 NGBQ9NPG2 151 aa9.85□□□□□ -0.83
LIN28A-201ENST00000254231 IGHV3-72A0A0B4J1Y9 119 aa9.85□□□□□ -0.83
LIN28A-201ENST00000254231 VSTM5A8MXK1 200 aa9.85□□□□□ -0.83
LIN28A-201ENST00000254231 DIRAS3O95661 229 aa9.85□□□□□ -0.83
LIN28A-201ENST00000254231 HAND1O96004 215 aa9.85□□□□□ -0.83
LIN28A-201ENST00000254231 THBDP07204 575 aa9.85□□□□□ -0.83
LIN28A-201ENST00000254231 CHRNB4P30926 498 aa9.85□□□□□ -0.83
LIN28A-201ENST00000254231 CEACAM8P31997 349 aaPredicted RBP9.85□□□□□ -0.83
LIN28A-201ENST00000254231 PPP1CCP36873 323 aaKnown RBP9.85□□□□□ -0.83
LIN28A-201ENST00000254231 ADORA2A-AS1P86434 159 aa9.85□□□□□ -0.83
LIN28A-201ENST00000254231 SORDQ00796 357 aa9.85□□□□□ -0.83
LIN28A-201ENST00000254231 RPS4Y2Q8TD47 263 aa9.85□□□□□ -0.83
LIN28A-201ENST00000254231 Q96M66 194 aa9.85□□□□□ -0.83
LIN28A-201ENST00000254231 C12orf4Q9NQ89 552 aa9.85□□□□□ -0.83
LIN28A-201ENST00000254231 C14orf166Q9Y224 244 aaKnown RBP9.85□□□□□ -0.83
LIN28A-201ENST00000254231 TENM4Q6N022 2769 aa9.85□□□□□ -0.83
LIN28A-201ENST00000254231 A0A0A6YYH2 397 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms