RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 TSPO2Q5TGU0 170 aa17.73■□□□□ 0.43
RARA-201ENST00000254066 WDR25Q64LD2 544 aaPredicted RBP17.73■□□□□ 0.43
RARA-201ENST00000254066 MRGPRGQ86SM5 289 aa17.73■□□□□ 0.43
RARA-201ENST00000254066 WDFY1Q8IWB7 410 aa17.73■□□□□ 0.43
RARA-201ENST00000254066 PRR22Q8IZ63 422 aa17.73■□□□□ 0.43
RARA-201ENST00000254066 TMEM123Q8N131 208 aa17.73■□□□□ 0.43
RARA-201ENST00000254066 IL22RA1Q8N6P7 574 aa17.73■□□□□ 0.43
RARA-201ENST00000254066 NPRL2Q8WTW4 380 aa17.73■□□□□ 0.43
RARA-201ENST00000254066 C10orf35Q96D05 121 aa17.73■□□□□ 0.43
RARA-201ENST00000254066 GAL3ST4Q96RP7 486 aa17.73■□□□□ 0.43
RARA-201ENST00000254066 MRPL13Q9BYD1 178 aaKnown RBP17.73■□□□□ 0.43
RARA-201ENST00000254066 VDAC3Q9Y277 283 aa17.73■□□□□ 0.43
RARA-201ENST00000254066 POLR1DQ9Y2S0 133 aa17.73■□□□□ 0.43
RARA-201ENST00000254066 POLR3KQ9Y2Y1 108 aaPredicted RBP17.73■□□□□ 0.43
RARA-201ENST00000254066 SPTBN5Q9NRC6 3674 aaKnown RBP17.72■□□□□ 0.43
RARA-201ENST00000254066 IGKV3-11P04433 115 aa17.72■□□□□ 0.43
RARA-201ENST00000254066 OMGP23515 440 aa17.72■□□□□ 0.43
RARA-201ENST00000254066 NCR3LG1Q68D85 454 aa17.72■□□□□ 0.43
RARA-201ENST00000254066 ZNF787Q6DD87 383 aa17.72■□□□□ 0.43
RARA-201ENST00000254066 CISD2Q8N5K1 135 aaKnown RBP17.72■□□□□ 0.43
RARA-201ENST00000254066 OR5D18Q8NGL1 313 aa17.72■□□□□ 0.43
RARA-201ENST00000254066 HDHD3Q9BSH5 251 aaPredicted RBP17.72■□□□□ 0.43
RARA-201ENST00000254066 TMEM222Q9H0R3 208 aa17.72■□□□□ 0.43
RARA-201ENST00000254066 MED29Q9NX70 200 aa17.72■□□□□ 0.43
RARA-201ENST00000254066 B3GALT1Q9Y5Z6 326 aa17.72■□□□□ 0.43
RARA-201ENST00000254066 MYO7AQ13402 2215 aa17.72■□□□□ 0.43
RARA-201ENST00000254066 FAM221AA4D161 298 aa17.72■□□□□ 0.43
RARA-201ENST00000254066 SOX15O60248 233 aa17.72■□□□□ 0.43
RARA-201ENST00000254066 SMPD2O60906 423 aa17.72■□□□□ 0.43
RARA-201ENST00000254066 POU2F2P09086 479 aa17.72■□□□□ 0.43
RARA-201ENST00000254066 IL11P20809 199 aa17.72■□□□□ 0.43
RARA-201ENST00000254066 MDKP21741 143 aaPredicted RBP17.72■□□□□ 0.43
RARA-201ENST00000254066 CTSSP25774 331 aa17.72■□□□□ 0.43
RARA-201ENST00000254066 TLE3Q04726 772 aa17.72■□□□□ 0.43
RARA-201ENST00000254066 NKAIN1Q4KMZ8 207 aa17.72■□□□□ 0.43
RARA-201ENST00000254066 RELTQ969Z4 430 aa17.72■□□□□ 0.43
RARA-201ENST00000254066 C3orf85A0A1B0GTC6 90 aa17.71■□□□□ 0.43
RARA-201ENST00000254066 PIAS2O75928 621 aa17.71■□□□□ 0.43
RARA-201ENST00000254066 IDH3GP51553 393 aaPredicted RBP17.71■□□□□ 0.43
RARA-201ENST00000254066 FXYD4P59646 89 aa17.71■□□□□ 0.43
RARA-201ENST00000254066 RUNX1Q01196 453 aa17.71■□□□□ 0.43
RARA-201ENST00000254066 ID3Q02535 119 aa17.71■□□□□ 0.43
RARA-201ENST00000254066 Q6ZSR3 168 aa17.71■□□□□ 0.43
RARA-201ENST00000254066 C16orf82Q7Z2V1 217 aa17.71■□□□□ 0.43
RARA-201ENST00000254066 ODF3L1Q8IXM7 274 aa17.71■□□□□ 0.43
RARA-201ENST00000254066 NAGKQ9UJ70 344 aa17.71■□□□□ 0.43
RARA-201ENST00000254066 SSSCA1O60232 199 aa17.71■□□□□ 0.43
RARA-201ENST00000254066 KLF8O95600 359 aaPredicted RBP17.71■□□□□ 0.43
RARA-201ENST00000254066 FCGR2AP12318 317 aa17.71■□□□□ 0.43
RARA-201ENST00000254066 GALR1P47211 349 aa17.71■□□□□ 0.43
RARA-201ENST00000254066 TMEM241Q24JQ0 296 aa17.71■□□□□ 0.43
RARA-201ENST00000254066 TP53RKQ96S44 253 aa17.71■□□□□ 0.43
RARA-201ENST00000254066 C20orf144Q9BQM9 153 aa17.71■□□□□ 0.43
RARA-201ENST00000254066 PRSS50Q9UI38 385 aa17.71■□□□□ 0.43
RARA-201ENST00000254066 A0A1W2PNV4 684 aa17.7■□□□□ 0.42
RARA-201ENST00000254066 ZFP92A6NM28 416 aa17.7■□□□□ 0.42
RARA-201ENST00000254066 MPPED1O15442 326 aa17.7■□□□□ 0.42
RARA-201ENST00000254066 ONECUT2O95948 504 aa17.7■□□□□ 0.42
RARA-201ENST00000254066 HRASP01112 189 aa17.7■□□□□ 0.42
RARA-201ENST00000254066 IFNA5P01569 189 aa17.7■□□□□ 0.42
RARA-201ENST00000254066 GJA4P35212 333 aa17.7■□□□□ 0.42
RARA-201ENST00000254066 BIDP55957 195 aa17.7■□□□□ 0.42
RARA-201ENST00000254066 MPV17LQ2QL34 196 aa17.7■□□□□ 0.42
RARA-201ENST00000254066 FAM57BQ71RH2 274 aa17.7■□□□□ 0.42
RARA-201ENST00000254066 ANAPC16Q96DE5 110 aa17.7■□□□□ 0.42
RARA-201ENST00000254066 PNRC2Q9NPJ4 139 aaKnown RBP17.7■□□□□ 0.42
RARA-201ENST00000254066 RPH3ALQ9UNE2 315 aa17.7■□□□□ 0.42
RARA-201ENST00000254066 VCANP13611 3396 aa17.7■□□□□ 0.42
RARA-201ENST00000254066 SCGB1D1O95968 90 aa17.7■□□□□ 0.42
RARA-201ENST00000254066 NPBWR2P48146 333 aa17.7■□□□□ 0.42
RARA-201ENST00000254066 HIST1H3AP68431 136 aa17.7■□□□□ 0.42
RARA-201ENST00000254066 ST8SIA1Q92185 356 aa17.7■□□□□ 0.42
RARA-201ENST00000254066 MMABQ96EY8 250 aaPredicted RBP17.7■□□□□ 0.42
RARA-201ENST00000254066 BTF3L4Q96K17 158 aa17.7■□□□□ 0.42
RARA-201ENST00000254066 PNO1Q9NRX1 252 aaKnown RBP17.7■□□□□ 0.42
RARA-201ENST00000254066 PHF3Q92576 2039 aaKnown RBP17.69■□□□□ 0.42
RARA-201ENST00000254066 H7BYZ3 331 aa17.69■□□□□ 0.42
RARA-201ENST00000254066 MMP7P09237 267 aaPredicted RBP17.69■□□□□ 0.42
RARA-201ENST00000254066 BSXQ3C1V8 233 aa17.69■□□□□ 0.42
RARA-201ENST00000254066 CPEB2Q7Z5Q1 589 aaKnown RBP17.69■□□□□ 0.42
RARA-201ENST00000254066 ZNF721Q8TF20 911 aa17.69■□□□□ 0.42
RARA-201ENST00000254066 PSMG3Q9BT73 122 aaPredicted RBP17.69■□□□□ 0.42
RARA-201ENST00000254066 PCED1AQ9H1Q7 454 aa17.69■□□□□ 0.42
RARA-201ENST00000254066 ELL3Q9HB65 397 aaPredicted RBP17.69■□□□□ 0.42
RARA-201ENST00000254066 KIR2DS5A0A0G2JLQ3 304 aa17.69■□□□□ 0.42
RARA-201ENST00000254066 A0A0G2JNG1 304 aa17.69■□□□□ 0.42
RARA-201ENST00000254066 C17orf51A8MQB3 221 aa17.69■□□□□ 0.42
RARA-201ENST00000254066 KIR2DS3K7RE56 304 aa17.69■□□□□ 0.42
RARA-201ENST00000254066 GZMHP20718 246 aa17.69■□□□□ 0.42
RARA-201ENST00000254066 SRP14P37108 136 aaKnown RBP17.69■□□□□ 0.42
RARA-201ENST00000254066 RPL29P47914 159 aaKnown RBP17.69■□□□□ 0.42
RARA-201ENST00000254066 HERV-K104P61576 105 aa17.69■□□□□ 0.42
RARA-201ENST00000254066 PPP1CAP62136 330 aa17.69■□□□□ 0.42
RARA-201ENST00000254066 RANP62826 216 aaKnown RBP17.69■□□□□ 0.42
RARA-201ENST00000254066 PLCXD2Q0VAA5 305 aa17.69■□□□□ 0.42
RARA-201ENST00000254066 KIR2DS5Q14953 304 aa17.69■□□□□ 0.42
RARA-201ENST00000254066 EXT1Q16394 746 aa17.69■□□□□ 0.42
RARA-201ENST00000254066 ARSJQ5FYB0 599 aaPredicted RBP17.69■□□□□ 0.42
RARA-201ENST00000254066 DMRTA1Q5VZB9 504 aa17.69■□□□□ 0.42
RARA-201ENST00000254066 HLA-DQA1Q5Y7H0 255 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms