RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 NPAS1Q99742 590 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 ZMAT5Q9UDW3 170 aaKnown RBP11.76□□□□□ -0.53
NEK4-201ENST00000233027 MRPS18BQ9Y676 258 aaKnown RBP11.76□□□□□ -0.53
NEK4-201ENST00000233027 F5H697 171 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 GOSR1O95249 250 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 HAND1O96004 215 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 CXCL2P19875 107 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 SPCS3P61009 180 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 PSG5Q15238 335 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 MRGPRFQ96AM1 343 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 GABRG3Q99928 467 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 SLC2A9Q9NRM0 540 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 FKBP11Q9NYL4 201 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 CLEC1BQ9P126 229 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 A0A1W2PQD3 144 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 CRISP2P16562 243 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 FOXL2P58012 376 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 CT55Q8WUE5 264 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 RNF2Q99496 336 aa11.76□□□□□ -0.53
NEK4-201ENST00000233027 LYRM2Q9NU23 88 aaPredicted RBP11.76□□□□□ -0.53
NEK4-201ENST00000233027 H3BQ15 152 aa11.75□□□□□ -0.53
NEK4-201ENST00000233027 TRA2AQ13595 282 aaKnown RBP eCLIP11.75□□□□□ -0.53
NEK4-201ENST00000233027 CLPPQ16740 277 aaPredicted RBP11.75□□□□□ -0.53
NEK4-201ENST00000233027 C19orf35Q6ZS72 473 aa11.75□□□□□ -0.53
NEK4-201ENST00000233027 LAMB2P55268 1798 aa11.75□□□□□ -0.53
NEK4-201ENST00000233027 CDIPTO14735 213 aa11.75□□□□□ -0.53
NEK4-201ENST00000233027 MAGEA5P43359 124 aa11.75□□□□□ -0.53
NEK4-201ENST00000233027 ZNF260Q3ZCT1 412 aa11.75□□□□□ -0.53
NEK4-201ENST00000233027 DCAF12L2Q5VW00 463 aa11.75□□□□□ -0.53
NEK4-201ENST00000233027 KIAA1217Q5T5P2 1943 aa11.75□□□□□ -0.53
NEK4-201ENST00000233027 ELOA3CA0A087WX78 387 aaPredicted RBP11.75□□□□□ -0.53
NEK4-201ENST00000233027 TRAV17A0A0B4J275 112 aa11.75□□□□□ -0.53
NEK4-201ENST00000233027 FAM157AC9JC47 383 aa11.75□□□□□ -0.53
NEK4-201ENST00000233027 MT-CO3P00414 261 aa11.75□□□□□ -0.53
NEK4-201ENST00000233027 APELAP0DMC3 54 aa11.75□□□□□ -0.53
NEK4-201ENST00000233027 DTD1Q8TEA8 209 aa11.75□□□□□ -0.53
NEK4-201ENST00000233027 ZDHHC16Q969W1 377 aa11.75□□□□□ -0.53
NEK4-201ENST00000233027 ANAPC16Q96DE5 110 aa11.75□□□□□ -0.53
NEK4-201ENST00000233027 GAL3ST2Q9H3Q3 398 aa11.75□□□□□ -0.53
NEK4-201ENST00000233027 GSX1Q9H4S2 264 aaPredicted RBP11.75□□□□□ -0.53
NEK4-201ENST00000233027 OR5B21A6NL26 309 aa11.75□□□□□ -0.53
NEK4-201ENST00000233027 ZNHIT1O43257 154 aa11.75□□□□□ -0.53
NEK4-201ENST00000233027 SPINT1O43278 529 aa11.75□□□□□ -0.53
NEK4-201ENST00000233027 VSIG10L2P0DP72 767 aa11.75□□□□□ -0.53
NEK4-201ENST00000233027 IL11P20809 199 aa11.75□□□□□ -0.53
NEK4-201ENST00000233027 SPEM2Q0P670 501 aa11.75□□□□□ -0.53
NEK4-201ENST00000233027 TMEM204Q9BSN7 226 aa11.75□□□□□ -0.53
NEK4-201ENST00000233027 WASHC3Q9Y3C0 194 aa11.75□□□□□ -0.53
NEK4-201ENST00000233027 PAGE4O60829 102 aa11.74□□□□□ -0.53
NEK4-201ENST00000233027 IGKV1D-16P01601 117 aa11.74□□□□□ -0.53
NEK4-201ENST00000233027 PSG2P11465 335 aa11.74□□□□□ -0.53
NEK4-201ENST00000233027 SURF2Q15527 256 aaPredicted RBP11.74□□□□□ -0.53
NEK4-201ENST00000233027 FAM209AQ5JX71 171 aa11.74□□□□□ -0.53
NEK4-201ENST00000233027 RHBDD2Q6NTF9 364 aa11.74□□□□□ -0.53
NEK4-201ENST00000233027 STPG2Q8N412 459 aa11.74□□□□□ -0.53
NEK4-201ENST00000233027 OOEPA6NGQ2 149 aa11.74□□□□□ -0.53
NEK4-201ENST00000233027 MRPL54Q6P161 138 aaKnown RBP11.74□□□□□ -0.53
NEK4-201ENST00000233027 OR10G8Q8NGN5 311 aa11.74□□□□□ -0.53
NEK4-201ENST00000233027 ABHD3Q8WU67 409 aa11.74□□□□□ -0.53
NEK4-201ENST00000233027 CRYABP02511 175 aaKnown RBP11.74□□□□□ -0.53
NEK4-201ENST00000233027 EPHA8P29322 1005 aaPredicted RBP11.74□□□□□ -0.53
NEK4-201ENST00000233027 HLA-DRB5Q30154 266 aa11.74□□□□□ -0.53
NEK4-201ENST00000233027 HFEQ30201 348 aa11.74□□□□□ -0.53
NEK4-201ENST00000233027 WDR73Q6P4I2 378 aa11.74□□□□□ -0.53
NEK4-201ENST00000233027 PDPNQ86YL7 162 aa11.74□□□□□ -0.53
NEK4-201ENST00000233027 ZNF764Q96H86 408 aaPredicted RBP11.74□□□□□ -0.53
NEK4-201ENST00000233027 A0A1W2PN81 502 aa11.74□□□□□ -0.53
NEK4-201ENST00000233027 TMPRSS2O15393 492 aa11.74□□□□□ -0.53
NEK4-201ENST00000233027 KIR3DL2P43630 455 aa11.74□□□□□ -0.53
NEK4-201ENST00000233027 TMEM50BP56557 158 aa11.74□□□□□ -0.53
NEK4-201ENST00000233027 SOX8P57073 446 aa11.74□□□□□ -0.53
NEK4-201ENST00000233027 RAC3P60763 192 aa11.74□□□□□ -0.53
NEK4-201ENST00000233027 PNRC1Q12796 327 aaPredicted RBP11.74□□□□□ -0.53
NEK4-201ENST00000233027 SLC23A3Q6PIS1 610 aa11.74□□□□□ -0.53
NEK4-201ENST00000233027 OR2H1Q9GZK4 316 aa11.74□□□□□ -0.53
NEK4-201ENST00000233027 M0QZ24 198 aa11.74□□□□□ -0.53
NEK4-201ENST00000233027 RNF224P0DH78 156 aa11.74□□□□□ -0.53
NEK4-201ENST00000233027 CCL3P10147 92 aa11.74□□□□□ -0.53
NEK4-201ENST00000233027 LPAR5Q9H1C0 372 aa11.74□□□□□ -0.53
NEK4-201ENST00000233027 VAX2Q9UIW0 290 aa11.74□□□□□ -0.53
NEK4-201ENST00000233027 MPC1Q9Y5U8 109 aa11.74□□□□□ -0.53
NEK4-201ENST00000233027 MDKP21741 143 aaPredicted RBP11.73□□□□□ -0.53
NEK4-201ENST00000233027 COL19A1Q14993 1142 aa11.73□□□□□ -0.53
NEK4-201ENST00000233027 SFTPA2Q8IWL1 248 aa11.73□□□□□ -0.53
NEK4-201ENST00000233027 C9orf40Q8IXQ3 194 aa11.73□□□□□ -0.53
NEK4-201ENST00000233027 OR4S2Q8NH73 311 aa11.73□□□□□ -0.53
NEK4-201ENST00000233027 FLYWCH2Q96CP2 140 aaKnown RBP11.73□□□□□ -0.53
NEK4-201ENST00000233027 SEBOXQ9HB31 216 aaPredicted RBP11.73□□□□□ -0.53
NEK4-201ENST00000233027 RCC2Q9P258 522 aaKnown RBP11.73□□□□□ -0.53
NEK4-201ENST00000233027 UFC1Q9Y3C8 167 aa11.73□□□□□ -0.53
NEK4-201ENST00000233027 IGHV3OR15-7A0A075B7D8 119 aa11.73□□□□□ -0.53
NEK4-201ENST00000233027 hADV38S2A0JD32 116 aa11.73□□□□□ -0.53
NEK4-201ENST00000233027 WISP3O95389 354 aaPredicted RBP11.73□□□□□ -0.53
NEK4-201ENST00000233027 LSM6P62312 80 aaKnown RBP11.73□□□□□ -0.53
NEK4-201ENST00000233027 MRPS11P82912 194 aaKnown RBP11.73□□□□□ -0.53
NEK4-201ENST00000233027 HIKESHIQ53FT3 197 aa11.73□□□□□ -0.53
NEK4-201ENST00000233027 DEFB124Q8NES8 71 aa11.73□□□□□ -0.53
NEK4-201ENST00000233027 SLC26A10Q8NG04 563 aa11.73□□□□□ -0.53
NEK4-201ENST00000233027 TNFRSF19Q9NS68 423 aa11.73□□□□□ -0.53
NEK4-201ENST00000233027 SLC7A10Q9NS82 523 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms