RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 OR51I2Q9H344 312 aa16.13■□□□□ 0.17
CLIP2-201ENST00000223398 ICE1Q9Y2F5 2266 aa16.13■□□□□ 0.17
CLIP2-201ENST00000223398 SEC14L6B5MCN3 397 aa16.13■□□□□ 0.17
CLIP2-201ENST00000223398 HOXD4P09016 255 aaPredicted RBP16.13■□□□□ 0.17
CLIP2-201ENST00000223398 C11orf87Q6NUJ2 197 aa16.13■□□□□ 0.17
CLIP2-201ENST00000223398 OR1B1Q8NGR6 318 aa16.13■□□□□ 0.17
CLIP2-201ENST00000223398 LY86O95711 162 aa16.13■□□□□ 0.17
CLIP2-201ENST00000223398 GZMHP20718 246 aa16.13■□□□□ 0.17
CLIP2-201ENST00000223398 CTSSP25774 331 aa16.13■□□□□ 0.17
CLIP2-201ENST00000223398 RAB32Q13637 225 aa16.13■□□□□ 0.17
CLIP2-201ENST00000223398 ENDOGQ14249 297 aaKnown RBP16.13■□□□□ 0.17
CLIP2-201ENST00000223398 ANXA10Q9UJ72 324 aa16.13■□□□□ 0.17
CLIP2-201ENST00000223398 PRSS44E7EML9 344 aa16.12■□□□□ 0.17
CLIP2-201ENST00000223398 PGA3P0DJD8 388 aa16.12■□□□□ 0.17
CLIP2-201ENST00000223398 HTN1P15515 57 aa16.12■□□□□ 0.17
CLIP2-201ENST00000223398 P2RY6Q15077 328 aa16.12■□□□□ 0.17
CLIP2-201ENST00000223398 ADAT3Q96EY9 351 aaPredicted RBP16.12■□□□□ 0.17
CLIP2-201ENST00000223398 C1RLQ9NZP8 487 aa16.12■□□□□ 0.17
CLIP2-201ENST00000223398 MYO16Q9Y6X6 1858 aa16.12■□□□□ 0.17
CLIP2-201ENST00000223398 C9orf170A2RU37 121 aa16.12■□□□□ 0.17
CLIP2-201ENST00000223398 TXNDC12O95881 172 aa16.12■□□□□ 0.17
CLIP2-201ENST00000223398 PDZK1IP1Q13113 114 aa16.12■□□□□ 0.17
CLIP2-201ENST00000223398 PRSS53Q2L4Q9 553 aa16.12■□□□□ 0.17
CLIP2-201ENST00000223398 SKA3Q8IX90 412 aa16.12■□□□□ 0.17
CLIP2-201ENST00000223398 OR5M8Q8NGP6 311 aa16.12■□□□□ 0.17
CLIP2-201ENST00000223398 OR10Z1Q8NGY1 313 aa16.12■□□□□ 0.17
CLIP2-201ENST00000223398 TGIF2Q9GZN2 237 aa16.12■□□□□ 0.17
CLIP2-201ENST00000223398 OGG1O15527 345 aa16.12■□□□□ 0.17
CLIP2-201ENST00000223398 OR2V2Q96R30 315 aa16.12■□□□□ 0.17
CLIP2-201ENST00000223398 CCL28Q9NRJ3 127 aa16.12■□□□□ 0.17
CLIP2-201ENST00000223398 TRAV8-7A0A075B6U6 113 aa16.12■□□□□ 0.17
CLIP2-201ENST00000223398 OR4C45A6NMZ5 311 aa16.12■□□□□ 0.17
CLIP2-201ENST00000223398 WISP3O95389 354 aaPredicted RBP16.12■□□□□ 0.17
CLIP2-201ENST00000223398 GALP22466 123 aa16.12■□□□□ 0.17
CLIP2-201ENST00000223398 FHL5Q5TD97 284 aa16.12■□□□□ 0.17
CLIP2-201ENST00000223398 ADTRPQ96IZ2 230 aa16.12■□□□□ 0.17
CLIP2-201ENST00000223398 HILPDAQ9Y5L2 63 aa16.12■□□□□ 0.17
CLIP2-201ENST00000223398 J3KRW8 73 aa16.11■□□□□ 0.17
CLIP2-201ENST00000223398 PCOLCEQ15113 449 aa16.11■□□□□ 0.17
CLIP2-201ENST00000223398 SLC16A12Q6ZSM3 486 aa16.11■□□□□ 0.17
CLIP2-201ENST00000223398 KLHDC2Q9Y2U9 406 aa16.11■□□□□ 0.17
CLIP2-201ENST00000223398 TRBV23-1A0A0A0MS06 115 aa16.11■□□□□ 0.17
CLIP2-201ENST00000223398 TSTD3H0UI37 97 aa16.11■□□□□ 0.17
CLIP2-201ENST00000223398 BCL2L11O43521 198 aa16.11■□□□□ 0.17
CLIP2-201ENST00000223398 MMDQ15546 238 aa16.11■□□□□ 0.17
CLIP2-201ENST00000223398 ARG1P05089 322 aa16.11■□□□□ 0.17
CLIP2-201ENST00000223398 GAPTQ8N292 157 aa16.11■□□□□ 0.17
CLIP2-201ENST00000223398 WIPI2Q9Y4P8 454 aa16.11■□□□□ 0.17
CLIP2-201ENST00000223398 IGHV3-21A0A0B4J1V1 117 aa16.11■□□□□ 0.17
CLIP2-201ENST00000223398 NPIPB8E9PQR5 432 aa16.11■□□□□ 0.17
CLIP2-201ENST00000223398 ERVFC1-1P60608 527 aa16.11■□□□□ 0.17
CLIP2-201ENST00000223398 VSTM2AQ8TAG5 236 aa16.11■□□□□ 0.17
CLIP2-201ENST00000223398 RAB40CQ96S21 281 aa16.11■□□□□ 0.17
CLIP2-201ENST00000223398 FAM186AA6NE01 2351 aa16.11■□□□□ 0.17
CLIP2-201ENST00000223398 CACNA1GO43497 2377 aa16.11■□□□□ 0.17
CLIP2-201ENST00000223398 F5H697 171 aa16.11■□□□□ 0.17
CLIP2-201ENST00000223398 GNG7O60262 68 aa16.11■□□□□ 0.17
CLIP2-201ENST00000223398 NCR3LG1Q68D85 454 aa16.1■□□□□ 0.17
CLIP2-201ENST00000223398 HARBI1Q96MB7 349 aa16.1■□□□□ 0.17
CLIP2-201ENST00000223398 TMEM210A6NLX4 147 aa16.1■□□□□ 0.17
CLIP2-201ENST00000223398 PRDX2P32119 198 aa16.1■□□□□ 0.17
CLIP2-201ENST00000223398 KLRB1Q12918 225 aa16.1■□□□□ 0.17
CLIP2-201ENST00000223398 KIAA0141Q14154 515 aaPredicted RBP16.1■□□□□ 0.17
CLIP2-201ENST00000223398 CLEC9AQ6UXN8 241 aa16.1■□□□□ 0.17
CLIP2-201ENST00000223398 MRGPRGQ86SM5 289 aa16.1■□□□□ 0.17
CLIP2-201ENST00000223398 OR10A7Q8NGE5 316 aa16.1■□□□□ 0.17
CLIP2-201ENST00000223398 ITLN1Q8WWA0 313 aa16.1■□□□□ 0.17
CLIP2-201ENST00000223398 GVINP1Q7Z2Y8 2422 aa16.1■□□□□ 0.17
CLIP2-201ENST00000223398 RAB19A4D1S5 217 aa16.1■□□□□ 0.17
CLIP2-201ENST00000223398 ABHD1Q96SE0 405 aa16.1■□□□□ 0.17
CLIP2-201ENST00000223398 RYDENQ9NUL5 291 aaKnown RBP16.1■□□□□ 0.17
CLIP2-201ENST00000223398 NINQ8N4C6 2090 aa16.1■□□□□ 0.17
CLIP2-201ENST00000223398 POLR2GP62487 172 aaKnown RBP eCLIP16.1■□□□□ 0.17
CLIP2-201ENST00000223398 ST3GAL2Q16842 350 aa16.1■□□□□ 0.17
CLIP2-201ENST00000223398 FAM27BQ5VT28 67 aa16.1■□□□□ 0.17
CLIP2-201ENST00000223398 FLYWCH2Q96CP2 140 aaKnown RBP16.1■□□□□ 0.17
CLIP2-201ENST00000223398 C10orf35Q96D05 121 aa16.1■□□□□ 0.17
CLIP2-201ENST00000223398 FABP9Q0Z7S8 132 aa16.09■□□□□ 0.17
CLIP2-201ENST00000223398 ZNF574Q6ZN55 896 aaPredicted RBP16.09■□□□□ 0.17
CLIP2-201ENST00000223398 ZNF826PQ6ZT77 177 aa16.09■□□□□ 0.17
CLIP2-201ENST00000223398 WNT2BQ93097 391 aa16.09■□□□□ 0.17
CLIP2-201ENST00000223398 SPSB2Q99619 263 aa16.09■□□□□ 0.17
CLIP2-201ENST00000223398 SEMA7AO75326 666 aa16.09■□□□□ 0.17
CLIP2-201ENST00000223398 ADAP1O75689 374 aa16.09■□□□□ 0.17
CLIP2-201ENST00000223398 PPP1CCP36873 323 aaKnown RBP16.09■□□□□ 0.17
CLIP2-201ENST00000223398 WFDC3Q8IUB2 231 aa16.09■□□□□ 0.17
CLIP2-201ENST00000223398 CHST5Q9GZS9 411 aa16.09■□□□□ 0.17
CLIP2-201ENST00000223398 A0A1W2PPQ1 181 aa16.09■□□□□ 0.17
CLIP2-201ENST00000223398 ATP6V1G2-DDX39BF2Z307 99 aa16.09■□□□□ 0.17
CLIP2-201ENST00000223398 MS4A18H0YCH9 400 aa16.09■□□□□ 0.17
CLIP2-201ENST00000223398 NAT2P11245 290 aa16.09■□□□□ 0.17
CLIP2-201ENST00000223398 MS4A18Q3C1V0 323 aa16.09■□□□□ 0.17
CLIP2-201ENST00000223398 C4orf17Q53FE4 359 aa16.09■□□□□ 0.17
CLIP2-201ENST00000223398 ADIPOR1Q96A54 375 aa16.09■□□□□ 0.17
CLIP2-201ENST00000223398 HDHD3Q9BSH5 251 aaPredicted RBP16.09■□□□□ 0.17
CLIP2-201ENST00000223398 SCNM1Q9BWG6 230 aa16.09■□□□□ 0.17
CLIP2-201ENST00000223398 RAB18Q9NP72 206 aa16.09■□□□□ 0.17
CLIP2-201ENST00000223398 RNF24Q9Y225 148 aa16.09■□□□□ 0.17
CLIP2-201ENST00000223398 NGFRP08138 427 aa16.09■□□□□ 0.17
CLIP2-201ENST00000223398 LINC01560Q8TB33 94 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms