RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 KCNG4Q8TDN1 519 aa13.55□□□□□ -0.24
CDH5-208ENST00000614547 IPO4Q8TEX9 1081 aaKnown RBP13.55□□□□□ -0.24
CDH5-208ENST00000614547 ALG1Q9BT22 464 aa13.55□□□□□ -0.24
CDH5-208ENST00000614547 PRC1O43663 620 aa13.54□□□□□ -0.24
CDH5-208ENST00000614547 ARMCX5Q6P1M9 558 aa13.54□□□□□ -0.24
CDH5-208ENST00000614547 NSUN7Q8NE18 718 aaKnown RBP13.54□□□□□ -0.24
CDH5-208ENST00000614547 MYL10Q9BUA6 226 aa13.54□□□□□ -0.24
CDH5-208ENST00000614547 INO80Q9ULG1 1556 aaPredicted RBP13.54□□□□□ -0.24
CDH5-208ENST00000614547 CCDC102BQ68D86 513 aa13.54□□□□□ -0.24
CDH5-208ENST00000614547 PHKBQ93100 1093 aa13.54□□□□□ -0.24
CDH5-208ENST00000614547 ZBTB3Q9H5J0 574 aa13.54□□□□□ -0.24
CDH5-208ENST00000614547 CPSF1Q10570 1443 aaKnown RBP13.54□□□□□ -0.24
CDH5-208ENST00000614547 TMEM232C9JQI7 657 aa13.54□□□□□ -0.24
CDH5-208ENST00000614547 H0YHG0 523 aa13.54□□□□□ -0.24
CDH5-208ENST00000614547 HMGB1P09429 215 aaKnown RBP13.54□□□□□ -0.24
CDH5-208ENST00000614547 GTF2A1P52655 376 aaPredicted RBP13.54□□□□□ -0.24
CDH5-208ENST00000614547 MYL5Q02045 173 aa13.54□□□□□ -0.24
CDH5-208ENST00000614547 DNAJC21Q5F1R6 531 aaKnown RBP13.54□□□□□ -0.24
CDH5-208ENST00000614547 DHX40Q8IX18 779 aaKnown RBP13.54□□□□□ -0.24
CDH5-208ENST00000614547 ZNF594Q96JF6 807 aaPredicted RBP13.54□□□□□ -0.24
CDH5-208ENST00000614547 AIFM3Q96NN9 605 aa13.54□□□□□ -0.24
CDH5-208ENST00000614547 DNA2P51530 1060 aa13.53□□□□□ -0.24
CDH5-208ENST00000614547 RAD51AP2Q09MP3 1159 aa13.53□□□□□ -0.24
CDH5-208ENST00000614547 NBPF6Q5VWK0 638 aa13.53□□□□□ -0.24
CDH5-208ENST00000614547 GOLGA1Q92805 767 aa13.53□□□□□ -0.24
CDH5-208ENST00000614547 NBPF4Q96M43 638 aa13.53□□□□□ -0.24
CDH5-208ENST00000614547 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.53□□□□□ -0.24
CDH5-208ENST00000614547 ADGRB1O14514 1584 aa13.53□□□□□ -0.24
CDH5-208ENST00000614547 A0A0G2JLW4 131 aa13.53□□□□□ -0.24
CDH5-208ENST00000614547 PFKFB1P16118 471 aa13.53□□□□□ -0.24
CDH5-208ENST00000614547 EVA1CP58658 441 aa13.53□□□□□ -0.24
CDH5-208ENST00000614547 SYCP1Q15431 976 aa13.53□□□□□ -0.24
CDH5-208ENST00000614547 KRT28Q7Z3Y7 464 aa13.53□□□□□ -0.24
CDH5-208ENST00000614547 CEP126Q9P2H0 1117 aa13.53□□□□□ -0.24
CDH5-208ENST00000614547 DBNLQ9UJU6 430 aaKnown RBP13.53□□□□□ -0.24
CDH5-208ENST00000614547 LRRFIP1Q32MZ4 808 aaKnown RBP13.53□□□□□ -0.24
CDH5-208ENST00000614547 WDHD1O75717 1129 aaPredicted RBP13.52□□□□□ -0.24
CDH5-208ENST00000614547 ALDH1L1O75891 902 aa13.52□□□□□ -0.24
CDH5-208ENST00000614547 TNNI3KQ59H18 835 aa13.52□□□□□ -0.24
CDH5-208ENST00000614547 SLC26A6Q9BXS9 759 aa13.52□□□□□ -0.24
CDH5-208ENST00000614547 IRX2Q9BZI1 471 aaPredicted RBP13.52□□□□□ -0.24
CDH5-208ENST00000614547 PAG1Q9NWQ8 432 aa13.52□□□□□ -0.24
CDH5-208ENST00000614547 RCOR1Q9UKL0 485 aa13.52□□□□□ -0.24
CDH5-208ENST00000614547 FPGT-TNNI3KV9GXZ4 949 aa13.52□□□□□ -0.24
CDH5-208ENST00000614547 TTC21AQ8NDW8 1320 aa13.52□□□□□ -0.24
CDH5-208ENST00000614547 CAMSAP1Q5T5Y3 1602 aa13.52□□□□□ -0.24
CDH5-208ENST00000614547 A2ML1A8K2U0 1454 aa13.52□□□□□ -0.25
CDH5-208ENST00000614547 ZNF213O14771 459 aa13.52□□□□□ -0.25
CDH5-208ENST00000614547 FILIP1LQ4L180 1135 aa13.52□□□□□ -0.25
CDH5-208ENST00000614547 CCDC158Q5M9N0 1113 aa13.52□□□□□ -0.25
CDH5-208ENST00000614547 STAMQ92783 540 aa13.52□□□□□ -0.25
CDH5-208ENST00000614547 DPF2Q92785 391 aa13.52□□□□□ -0.25
CDH5-208ENST00000614547 CAPZA3Q96KX2 299 aa13.52□□□□□ -0.25
CDH5-208ENST00000614547 PDE11AQ9HCR9 933 aa13.52□□□□□ -0.25
CDH5-208ENST00000614547 ADAMTS2O95450 1211 aa13.52□□□□□ -0.25
CDH5-208ENST00000614547 MATR3P43243 847 aaKnown RBP eCLIP13.52□□□□□ -0.25
CDH5-208ENST00000614547 ANO1Q5XXA6 986 aa13.52□□□□□ -0.25
CDH5-208ENST00000614547 ANKRD13DQ6ZTN6 518 aa13.52□□□□□ -0.25
CDH5-208ENST00000614547 NOC3LQ8WTT2 800 aaKnown RBP13.52□□□□□ -0.25
CDH5-208ENST00000614547 DRC1Q96MC2 740 aa13.52□□□□□ -0.25
CDH5-208ENST00000614547 AATKQ6ZMQ8 1374 aa13.51□□□□□ -0.25
CDH5-208ENST00000614547 E7EWF7 191 aa13.51□□□□□ -0.25
CDH5-208ENST00000614547 NLRP12P59046 1061 aa13.51□□□□□ -0.25
CDH5-208ENST00000614547 ACBD3Q9H3P7 528 aa13.51□□□□□ -0.25
CDH5-208ENST00000614547 PPP2R2CQ9Y2T4 447 aa13.51□□□□□ -0.25
CDH5-208ENST00000614547 ADGRB3O60242 1522 aa13.51□□□□□ -0.25
CDH5-208ENST00000614547 NAP1L1P55209 391 aaKnown RBP13.51□□□□□ -0.25
CDH5-208ENST00000614547 TSPYL1Q9H0U9 437 aa13.51□□□□□ -0.25
CDH5-208ENST00000614547 ZNF446Q9NWS9 450 aa13.51□□□□□ -0.25
CDH5-208ENST00000614547 NFE2L3Q9Y4A8 694 aa13.51□□□□□ -0.25
CDH5-208ENST00000614547 CDK12Q9NYV4 1490 aaPredicted RBP13.51□□□□□ -0.25
CDH5-208ENST00000614547 IPO7O95373 1038 aaKnown RBP13.51□□□□□ -0.25
CDH5-208ENST00000614547 CDC25BP30305 580 aa13.51□□□□□ -0.25
CDH5-208ENST00000614547 METAP2P50579 478 aaKnown RBP eCLIP13.5□□□□□ -0.25
CDH5-208ENST00000614547 IRX3P78415 501 aaPredicted RBP13.5□□□□□ -0.25
CDH5-208ENST00000614547 ADALQ6DHV7 355 aa13.5□□□□□ -0.25
CDH5-208ENST00000614547 DHX58Q96C10 678 aa13.5□□□□□ -0.25
CDH5-208ENST00000614547 NUP88Q99567 741 aaPredicted RBP13.5□□□□□ -0.25
CDH5-208ENST00000614547 PARD6BQ9BYG5 372 aa13.5□□□□□ -0.25
CDH5-208ENST00000614547 IMPACTQ9P2X3 320 aa13.5□□□□□ -0.25
CDH5-208ENST00000614547 MROH2AA6NES4 1674 aa13.5□□□□□ -0.25
CDH5-208ENST00000614547 SRCAPQ6ZRS2 3230 aa13.5□□□□□ -0.25
CDH5-208ENST00000614547 ADD1P35611 737 aaKnown RBP13.5□□□□□ -0.25
CDH5-208ENST00000614547 CCT6AP40227 531 aaKnown RBP13.5□□□□□ -0.25
CDH5-208ENST00000614547 CHMP4BP1P59074 171 aa13.5□□□□□ -0.25
CDH5-208ENST00000614547 EPHA10Q5JZY3 1008 aa13.5□□□□□ -0.25
CDH5-208ENST00000614547 MYSM1Q5VVJ2 828 aa13.5□□□□□ -0.25
CDH5-208ENST00000614547 NAA16Q6N069 864 aaPredicted RBP13.5□□□□□ -0.25
CDH5-208ENST00000614547 NYAP1Q6ZVC0 841 aa13.5□□□□□ -0.25
CDH5-208ENST00000614547 DEF6Q9H4E7 631 aa13.5□□□□□ -0.25
CDH5-208ENST00000614547 GOLGB1Q14789 3259 aaKnown RBP13.5□□□□□ -0.25
CDH5-208ENST00000614547 PDIA3P30101 505 aaKnown RBP13.5□□□□□ -0.25
CDH5-208ENST00000614547 GRAMD1CQ8IYS0 662 aa13.5□□□□□ -0.25
CDH5-208ENST00000614547 TBX22Q9Y458 520 aa13.5□□□□□ -0.25
CDH5-208ENST00000614547 CD163L1Q9NR16 1453 aa13.49□□□□□ -0.25
CDH5-208ENST00000614547 PATL2C9JE40 543 aaKnown RBP13.49□□□□□ -0.25
CDH5-208ENST00000614547 IARSP41252 1262 aaKnown RBP13.49□□□□□ -0.25
CDH5-208ENST00000614547 CRB1P82279 1406 aa13.49□□□□□ -0.25
CDH5-208ENST00000614547 MICALL1Q8N3F8 863 aa13.49□□□□□ -0.25
CDH5-208ENST00000614547 CENPHQ9H3R5 247 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms