RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 FOXO4P98177 505 aa16.95■□□□□ 0.3
HMGB1P24-201ENST00000611897 CCDC57Q2TAC2 916 aa16.95■□□□□ 0.3
HMGB1P24-201ENST00000611897 CERS5Q8N5B7 392 aa16.95■□□□□ 0.3
HMGB1P24-201ENST00000611897 CNNM1Q9NRU3 951 aa16.95■□□□□ 0.3
HMGB1P24-201ENST00000611897 SREBF2Q12772 1141 aa16.94■□□□□ 0.3
HMGB1P24-201ENST00000611897 EPHA10Q5JZY3 1008 aa16.94■□□□□ 0.3
HMGB1P24-201ENST00000611897 BEND3Q5T5X7 828 aa16.94■□□□□ 0.3
HMGB1P24-201ENST00000611897 DEFB129Q9H1M3 183 aa16.94■□□□□ 0.3
HMGB1P24-201ENST00000611897 C9orf78Q9NZ63 289 aaPredicted RBP16.94■□□□□ 0.3
HMGB1P24-201ENST00000611897 GRM8O00222 908 aa16.93■□□□□ 0.3
HMGB1P24-201ENST00000611897 MYO1BO43795 1136 aa16.93■□□□□ 0.3
HMGB1P24-201ENST00000611897 CFAP100Q494V2 611 aa16.93■□□□□ 0.3
HMGB1P24-201ENST00000611897 LDHAL6AQ6ZMR3 332 aa16.93■□□□□ 0.3
HMGB1P24-201ENST00000611897 WDR63Q8IWG1 891 aa16.93■□□□□ 0.3
HMGB1P24-201ENST00000611897 FAM9BQ8IZU0 186 aa16.93■□□□□ 0.3
HMGB1P24-201ENST00000611897 SPINK5Q9NQ38 1064 aaPredicted RBP16.93■□□□□ 0.3
HMGB1P24-201ENST00000611897 HPS5Q9UPZ3 1129 aa16.93■□□□□ 0.3
HMGB1P24-201ENST00000611897 MMP14P50281 582 aa16.92■□□□□ 0.3
HMGB1P24-201ENST00000611897 ZBED3Q96IU2 234 aaPredicted RBP16.92■□□□□ 0.3
HMGB1P24-201ENST00000611897 IRS2Q9Y4H2 1338 aa16.92■□□□□ 0.3
HMGB1P24-201ENST00000611897 COL1A1P02452 1464 aaPredicted RBP16.92■□□□□ 0.3
HMGB1P24-201ENST00000611897 SSC5DA1L4H1 1573 aa16.91■□□□□ 0.3
HMGB1P24-201ENST00000611897 GPR25O00155 361 aa16.91■□□□□ 0.3
HMGB1P24-201ENST00000611897 SPRYD7Q5W111 196 aa16.91■□□□□ 0.3
HMGB1P24-201ENST00000611897 SLC10A4Q96EP9 437 aa16.91■□□□□ 0.3
HMGB1P24-201ENST00000611897 CLMNQ96JQ2 1002 aa16.91■□□□□ 0.3
HMGB1P24-201ENST00000611897 AOX1Q06278 1338 aa16.91■□□□□ 0.3
HMGB1P24-201ENST00000611897 SPDYE2BA6NHP3 402 aa16.9■□□□□ 0.3
HMGB1P24-201ENST00000611897 SPDYE6P0CI01 402 aa16.9■□□□□ 0.3
HMGB1P24-201ENST00000611897 TM4SF4P48230 202 aa16.9■□□□□ 0.3
HMGB1P24-201ENST00000611897 R3HDMLQ9H3Y0 253 aa16.9■□□□□ 0.3
HMGB1P24-201ENST00000611897 PPP1R12BO60237 982 aaPredicted RBP16.89■□□□□ 0.29
HMGB1P24-201ENST00000611897 FKTNO75072 461 aa16.89■□□□□ 0.29
HMGB1P24-201ENST00000611897 SLC34A2O95436 690 aa16.89■□□□□ 0.29
HMGB1P24-201ENST00000611897 IL1R1P14778 569 aa16.89■□□□□ 0.29
HMGB1P24-201ENST00000611897 GYG1P46976 350 aa16.89■□□□□ 0.29
HMGB1P24-201ENST00000611897 LDLRAD1Q5T700 205 aa16.89■□□□□ 0.29
HMGB1P24-201ENST00000611897 C15orf52Q6ZUT6 534 aaKnown RBP16.89■□□□□ 0.29
HMGB1P24-201ENST00000611897 PRMT6Q96LA8 375 aaPredicted RBP16.89■□□□□ 0.29
HMGB1P24-201ENST00000611897 SRCIN1Q9C0H9 1055 aa16.89■□□□□ 0.29
HMGB1P24-201ENST00000611897 PKN2Q16513 984 aaKnown RBP16.88■□□□□ 0.29
HMGB1P24-201ENST00000611897 NCBP3Q53F19 620 aaKnown RBP16.88■□□□□ 0.29
HMGB1P24-201ENST00000611897 MFSD14BQ5SR56 506 aa16.88■□□□□ 0.29
HMGB1P24-201ENST00000611897 NBPF12Q5TAG4 269 aaPredicted RBP16.88■□□□□ 0.29
HMGB1P24-201ENST00000611897 SUCLG2Q96I99 432 aa16.88■□□□□ 0.29
HMGB1P24-201ENST00000611897 WNK4Q96J92 1243 aa16.88■□□□□ 0.29
HMGB1P24-201ENST00000611897 PPP2R3BQ9Y5P8 575 aa16.88■□□□□ 0.29
HMGB1P24-201ENST00000611897 OTOFQ9HC10 1997 aa16.88■□□□□ 0.29
HMGB1P24-201ENST00000611897 ARAP2Q8WZ64 1704 aa16.87■□□□□ 0.29
HMGB1P24-201ENST00000611897 MANSC4A6NHS7 340 aaPredicted RBP16.87■□□□□ 0.29
HMGB1P24-201ENST00000611897 CHAF1AQ13111 956 aaPredicted RBP16.87■□□□□ 0.29
HMGB1P24-201ENST00000611897 SUPT20HL1Q3ZLR7 823 aa16.87■□□□□ 0.29
HMGB1P24-201ENST00000611897 MTMR14Q8NCE2 650 aa16.87■□□□□ 0.29
HMGB1P24-201ENST00000611897 PUS3Q9BZE2 481 aaKnown RBP16.87■□□□□ 0.29
HMGB1P24-201ENST00000611897 TTF2Q9UNY4 1162 aaKnown RBP16.87■□□□□ 0.29
HMGB1P24-201ENST00000611897 IQSEC3Q9UPP2 1182 aaPredicted RBP16.87■□□□□ 0.29
HMGB1P24-201ENST00000611897 ALDH1L1O75891 902 aa16.86■□□□□ 0.29
HMGB1P24-201ENST00000611897 IREB2P48200 963 aaKnown RBP16.86■□□□□ 0.29
HMGB1P24-201ENST00000611897 RASA3Q14644 834 aa16.86■□□□□ 0.29
HMGB1P24-201ENST00000611897 FBXO46Q6PJ61 603 aaPredicted RBP16.86■□□□□ 0.29
HMGB1P24-201ENST00000611897 FRAT2O75474 233 aaPredicted RBP16.85■□□□□ 0.29
HMGB1P24-201ENST00000611897 ALDH1A1P00352 501 aa16.85■□□□□ 0.29
HMGB1P24-201ENST00000611897 HIBADHP31937 336 aaKnown RBP16.85■□□□□ 0.29
HMGB1P24-201ENST00000611897 FKBP1AP62942 108 aaKnown RBP16.85■□□□□ 0.29
HMGB1P24-201ENST00000611897 VPS37DQ86XT2 251 aa16.85■□□□□ 0.29
HMGB1P24-201ENST00000611897 IFNL1Q8IU54 200 aa16.85■□□□□ 0.29
HMGB1P24-201ENST00000611897 TDRD3Q9H7E2 651 aaKnown RBP16.85■□□□□ 0.29
HMGB1P24-201ENST00000611897 TRIM17Q9Y577 477 aa16.85■□□□□ 0.29
HMGB1P24-201ENST00000611897 TCP10L2B9ZVM9 353 aa16.84■□□□□ 0.29
HMGB1P24-201ENST00000611897 IGF2BP3O00425 579 aaKnown RBP eCLIP16.84■□□□□ 0.29
HMGB1P24-201ENST00000611897 NBPF7P0C2Y1 421 aaPredicted RBP16.84■□□□□ 0.29
HMGB1P24-201ENST00000611897 ZBTB48P10074 688 aaPredicted RBP16.84■□□□□ 0.29
HMGB1P24-201ENST00000611897 UBE4AQ14139 1066 aa16.84■□□□□ 0.29
HMGB1P24-201ENST00000611897 BICC1Q9H694 974 aaKnown RBP16.84■□□□□ 0.29
HMGB1P24-201ENST00000611897 ELP3Q9H9T3 547 aa16.84■□□□□ 0.29
HMGB1P24-201ENST00000611897 ZNF70Q9UC06 446 aaPredicted RBP16.84■□□□□ 0.29
HMGB1P24-201ENST00000611897 ZNF316A6NFI3 1004 aaPredicted RBP16.83■□□□□ 0.28
HMGB1P24-201ENST00000611897 TNFAIP1Q13829 316 aa16.83■□□□□ 0.28
HMGB1P24-201ENST00000611897 MAP3K11Q16584 847 aa16.83■□□□□ 0.28
HMGB1P24-201ENST00000611897 METTL24Q5JXM2 366 aa16.83■□□□□ 0.28
HMGB1P24-201ENST00000611897 FAM205AQ6ZU69 1335 aa16.83■□□□□ 0.28
HMGB1P24-201ENST00000611897 CDAN1Q8IWY9 1227 aa16.83■□□□□ 0.28
HMGB1P24-201ENST00000611897 TDRD7Q8NHU6 1098 aaKnown RBP16.83■□□□□ 0.28
HMGB1P24-201ENST00000611897 USP2O75604 605 aaPredicted RBP16.82■□□□□ 0.28
HMGB1P24-201ENST00000611897 GJA5P36382 358 aa16.82■□□□□ 0.28
HMGB1P24-201ENST00000611897 SPDYE2Q495Y8 402 aa16.82■□□□□ 0.28
HMGB1P24-201ENST00000611897 NOM1Q5C9Z4 860 aaKnown RBP16.82■□□□□ 0.28
HMGB1P24-201ENST00000611897 ANKRD13AQ8IZ07 590 aa16.82■□□□□ 0.28
HMGB1P24-201ENST00000611897 KAZALD1Q96I82 304 aa16.82■□□□□ 0.28
HMGB1P24-201ENST00000611897 FAM84BQ96KN1 310 aaPredicted RBP16.82■□□□□ 0.28
HMGB1P24-201ENST00000611897 MROH5Q6ZUA9 1318 aa16.81■□□□□ 0.28
HMGB1P24-201ENST00000611897 CRKP46108 304 aa16.81■□□□□ 0.28
HMGB1P24-201ENST00000611897 INHBEP58166 350 aa16.81■□□□□ 0.28
HMGB1P24-201ENST00000611897 LRRC24Q50LG9 513 aa16.81■□□□□ 0.28
HMGB1P24-201ENST00000611897 DZIP1LQ8IYY4 767 aaKnown RBP16.81■□□□□ 0.28
HMGB1P24-201ENST00000611897 CFHR5Q9BXR6 569 aa16.81■□□□□ 0.28
HMGB1P24-201ENST00000611897 SERPINA10Q9UK55 444 aa16.81■□□□□ 0.28
HMGB1P24-201ENST00000611897 LAMB1P07942 1786 aa16.81■□□□□ 0.28
HMGB1P24-201ENST00000611897 HTTP42858 3142 aa16.81■□□□□ 0.28
HMGB1P24-201ENST00000611897 KIAA0100Q14667 2235 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms