RNA–Protein interactions for RNA: ENST00000600453.1

IRF3-226, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-226ENST00000600453 DLGAP5Q15398 846 aa19.56■□□□□ 0.72
IRF3-226ENST00000600453 LRRC24Q50LG9 513 aa19.56■□□□□ 0.72
IRF3-226ENST00000600453 RGMBQ6NW40 437 aa19.56■□□□□ 0.72
IRF3-226ENST00000600453 MTMR14Q8NCE2 650 aa19.56■□□□□ 0.72
IRF3-226ENST00000600453 TDRD7Q8NHU6 1098 aaKnown RBP19.56■□□□□ 0.72
IRF3-226ENST00000600453 FAM84BQ96KN1 310 aaPredicted RBP19.56■□□□□ 0.72
IRF3-226ENST00000600453 PRDM10Q9NQV6 1147 aa19.56■□□□□ 0.72
IRF3-226ENST00000600453 ASTN2O75129 1339 aaPredicted RBP19.55■□□□□ 0.72
IRF3-226ENST00000600453 FAM205AQ6ZU69 1335 aa19.55■□□□□ 0.72
IRF3-226ENST00000600453 MYO1BO43795 1136 aa19.55■□□□□ 0.72
IRF3-226ENST00000600453 NF2P35240 595 aa19.55■□□□□ 0.72
IRF3-226ENST00000600453 INTS3Q68E01 1043 aaKnown RBP19.55■□□□□ 0.72
IRF3-226ENST00000600453 DLK2Q6UY11 383 aa19.55■□□□□ 0.72
IRF3-226ENST00000600453 APOBEC3FQ8IUX4 373 aaKnown RBP19.55■□□□□ 0.72
IRF3-226ENST00000600453 EYA2O00167 538 aa19.54■□□□□ 0.72
IRF3-226ENST00000600453 GNAI3P08754 354 aa19.54■□□□□ 0.72
IRF3-226ENST00000600453 IFIT1P09914 478 aaKnown RBP19.54■□□□□ 0.72
IRF3-226ENST00000600453 GYG1P46976 350 aa19.54■□□□□ 0.72
IRF3-226ENST00000600453 FBXO33Q7Z6M2 555 aa19.54■□□□□ 0.72
IRF3-226ENST00000600453 A0A1B0GUL6 1792 aa19.53■□□□□ 0.72
IRF3-226ENST00000600453 CA12O43570 354 aa19.53■□□□□ 0.72
IRF3-226ENST00000600453 FRAT2O75474 233 aaPredicted RBP19.53■□□□□ 0.72
IRF3-226ENST00000600453 TNS4Q8IZW8 715 aa19.53■□□□□ 0.72
IRF3-226ENST00000600453 ZBED3Q96IU2 234 aaPredicted RBP19.53■□□□□ 0.72
IRF3-226ENST00000600453 RFX5P48382 616 aaPredicted RBP19.52■□□□□ 0.72
IRF3-226ENST00000600453 ZNF157P51786 506 aaPredicted RBP19.52■□□□□ 0.72
IRF3-226ENST00000600453 PTPN12Q05209 780 aaKnown RBP19.52■□□□□ 0.72
IRF3-226ENST00000600453 PUM3Q15397 648 aaKnown RBP19.52■□□□□ 0.72
IRF3-226ENST00000600453 MFSD14BQ5SR56 506 aa19.52■□□□□ 0.72
IRF3-226ENST00000600453 CERS5Q8N5B7 392 aa19.52■□□□□ 0.72
IRF3-226ENST00000600453 VGLL2Q8N8G2 317 aa19.52■□□□□ 0.72
IRF3-226ENST00000600453 KLHDC4Q8TBB5 520 aa19.52■□□□□ 0.72
IRF3-226ENST00000600453 TBC1D22AQ8WUA7 517 aa19.52■□□□□ 0.72
IRF3-226ENST00000600453 F8W031 263 aaPredicted RBP19.51■□□□□ 0.71
IRF3-226ENST00000600453 AOC2O75106 756 aa19.51■□□□□ 0.71
IRF3-226ENST00000600453 CIAO1O76071 339 aa19.51■□□□□ 0.71
IRF3-226ENST00000600453 ATF7IPQ6VMQ6 1270 aa19.51■□□□□ 0.71
IRF3-226ENST00000600453 REM2Q8IYK8 340 aaPredicted RBP19.51■□□□□ 0.71
IRF3-226ENST00000600453 FRAT1Q92837 279 aaPredicted RBP19.51■□□□□ 0.71
IRF3-226ENST00000600453 SLC5A1P13866 664 aa19.5■□□□□ 0.71
IRF3-226ENST00000600453 RBM5P52756 815 aaKnown RBP eCLIP19.5■□□□□ 0.71
IRF3-226ENST00000600453 CFAP100Q494V2 611 aa19.5■□□□□ 0.71
IRF3-226ENST00000600453 LPIN2Q92539 896 aa19.5■□□□□ 0.71
IRF3-226ENST00000600453 CEP126Q9P2H0 1117 aa19.5■□□□□ 0.71
IRF3-226ENST00000600453 LRRFIP2Q9Y608 721 aaKnown RBP19.5■□□□□ 0.71
IRF3-226ENST00000600453 ZNF646O15015 1829 aaPredicted RBP19.5■□□□□ 0.71
IRF3-226ENST00000600453 LBX1P52954 281 aa19.49■□□□□ 0.71
IRF3-226ENST00000600453 ZKSCAN2Q63HK3 967 aa19.49■□□□□ 0.71
IRF3-226ENST00000600453 SERPINA10Q9UK55 444 aa19.49■□□□□ 0.71
IRF3-226ENST00000600453 TTF2Q9UNY4 1162 aaKnown RBP19.49■□□□□ 0.71
IRF3-226ENST00000600453 PPP2R3BQ9Y5P8 575 aa19.49■□□□□ 0.71
IRF3-226ENST00000600453 SPDYE2BA6NHP3 402 aa19.48■□□□□ 0.71
IRF3-226ENST00000600453 BCAR3O75815 825 aa19.48■□□□□ 0.71
IRF3-226ENST00000600453 SPDYE6P0CI01 402 aa19.48■□□□□ 0.71
IRF3-226ENST00000600453 TRIM27P14373 513 aa19.48■□□□□ 0.71
IRF3-226ENST00000600453 FGFR2P21802 821 aa19.48■□□□□ 0.71
IRF3-226ENST00000600453 IL15P40933 162 aaPredicted RBP19.48■□□□□ 0.71
IRF3-226ENST00000600453 TTLL12Q14166 644 aaPredicted RBP19.48■□□□□ 0.71
IRF3-226ENST00000600453 ARMC9Q7Z3E5 817 aa19.48■□□□□ 0.71
IRF3-226ENST00000600453 MEIS3Q99687 375 aa19.48■□□□□ 0.71
IRF3-226ENST00000600453 COPRSQ9NQ92 184 aa19.48■□□□□ 0.71
IRF3-226ENST00000600453 JAG2Q9Y219 1238 aa19.48■□□□□ 0.71
IRF3-226ENST00000600453 HSPA8P11142 646 aaKnown RBP19.47■□□□□ 0.71
IRF3-226ENST00000600453 BCAMP50895 628 aa19.47■□□□□ 0.71
IRF3-226ENST00000600453 HDLBPQ00341 1268 aaKnown RBP19.47■□□□□ 0.71
IRF3-226ENST00000600453 ATG9AQ7Z3C6 839 aa19.47■□□□□ 0.71
IRF3-226ENST00000600453 PRMT6Q96LA8 375 aaPredicted RBP19.47■□□□□ 0.71
IRF3-226ENST00000600453 MRIQ9BWK5 157 aa19.47■□□□□ 0.71
IRF3-226ENST00000600453 DEFB129Q9H1M3 183 aa19.47■□□□□ 0.71
IRF3-226ENST00000600453 GNL3LQ9NVN8 582 aaKnown RBP19.47■□□□□ 0.71
IRF3-226ENST00000600453 SUGT1Q9Y2Z0 365 aa19.47■□□□□ 0.71
IRF3-226ENST00000600453 FAM155AB1AL88 458 aaPredicted RBP19.46■□□□□ 0.71
IRF3-226ENST00000600453 SLC10A3P09131 477 aa19.46■□□□□ 0.71
IRF3-226ENST00000600453 TNFAIP1Q13829 316 aa19.46■□□□□ 0.71
IRF3-226ENST00000600453 SUPT20HL1Q3ZLR7 823 aa19.46■□□□□ 0.71
IRF3-226ENST00000600453 PRAMEF18Q5VWM3 479 aa19.46■□□□□ 0.71
IRF3-226ENST00000600453 SIL1Q9H173 461 aa19.46■□□□□ 0.71
IRF3-226ENST00000600453 SCAF8Q9UPN6 1271 aaKnown RBP19.46■□□□□ 0.71
IRF3-226ENST00000600453 THSD7BQ9C0I4 1608 aa19.46■□□□□ 0.71
IRF3-226ENST00000600453 COL1A1P02452 1464 aaPredicted RBP19.46■□□□□ 0.71
IRF3-226ENST00000600453 ZBED9Q6R2W3 1325 aa19.46■□□□□ 0.71
IRF3-226ENST00000600453 GNAI2P04899 355 aa19.45■□□□□ 0.7
IRF3-226ENST00000600453 CHAF1AQ13111 956 aaPredicted RBP19.45■□□□□ 0.7
IRF3-226ENST00000600453 IQSEC3Q9UPP2 1182 aaPredicted RBP19.45■□□□□ 0.7
IRF3-226ENST00000600453 PAPPA2Q9BXP8 1791 aa19.44■□□□□ 0.7
IRF3-226ENST00000600453 SRGAP3O43295 1099 aa19.44■□□□□ 0.7
IRF3-226ENST00000600453 PPP1R12BO60237 982 aaPredicted RBP19.44■□□□□ 0.7
IRF3-226ENST00000600453 KIF23Q02241 960 aaPredicted RBP19.44■□□□□ 0.7
IRF3-226ENST00000600453 MTX1Q13505 466 aa19.44■□□□□ 0.7
IRF3-226ENST00000600453 ATP2B3Q16720 1220 aa19.44■□□□□ 0.7
IRF3-226ENST00000600453 WDR66Q8TBY9 1149 aa19.44■□□□□ 0.7
IRF3-226ENST00000600453 CLUAP1Q96AJ1 413 aa19.44■□□□□ 0.7
IRF3-226ENST00000600453 MAST3O60307 1309 aa19.44■□□□□ 0.7
IRF3-226ENST00000600453 UNCXA6NJT0 531 aa19.43■□□□□ 0.7
IRF3-226ENST00000600453 UBE2Q2LH0YL09 131 aa19.43■□□□□ 0.7
IRF3-226ENST00000600453 DZIP1LQ8IYY4 767 aaKnown RBP19.43■□□□□ 0.7
IRF3-226ENST00000600453 VEZTQ9HBM0 779 aa19.43■□□□□ 0.7
IRF3-226ENST00000600453 AKAP2Q9Y2D5 859 aa19.43■□□□□ 0.7
IRF3-226ENST00000600453 CRKP46108 304 aa19.42■□□□□ 0.7
IRF3-226ENST00000600453 TNNI2P48788 182 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms