RNA–Protein interactions for RNA: ENST00000599880.1

SIN3B-210, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 3

Gene SIN3B, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-210ENST00000599880 AKAP11Q9UKA4 1901 aa13.67□□□□□ -0.22
SIN3B-210ENST00000599880 PDE8BO95263 885 aa13.67□□□□□ -0.22
SIN3B-210ENST00000599880 HIBADHP31937 336 aaKnown RBP13.67□□□□□ -0.22
SIN3B-210ENST00000599880 RFX5P48382 616 aaPredicted RBP13.67□□□□□ -0.22
SIN3B-210ENST00000599880 FKBP1BP68106 108 aa13.67□□□□□ -0.22
SIN3B-210ENST00000599880 LRRC24Q50LG9 513 aa13.67□□□□□ -0.22
SIN3B-210ENST00000599880 METTL24Q5JXM2 366 aa13.67□□□□□ -0.22
SIN3B-210ENST00000599880 INTS3Q68E01 1043 aaKnown RBP13.67□□□□□ -0.22
SIN3B-210ENST00000599880 DLK2Q6UY11 383 aa13.67□□□□□ -0.22
SIN3B-210ENST00000599880 CERS5Q8N5B7 392 aa13.67□□□□□ -0.22
SIN3B-210ENST00000599880 TDRD7Q8NHU6 1098 aaKnown RBP13.67□□□□□ -0.22
SIN3B-210ENST00000599880 FAM84BQ96KN1 310 aaPredicted RBP13.67□□□□□ -0.22
SIN3B-210ENST00000599880 PRDM10Q9NQV6 1147 aa13.67□□□□□ -0.22
SIN3B-210ENST00000599880 FBXO3Q9UK99 471 aa13.67□□□□□ -0.22
SIN3B-210ENST00000599880 IPO8O15397 1037 aaKnown RBP13.66□□□□□ -0.22
SIN3B-210ENST00000599880 HNRNPUQ00839 825 aaKnown RBP eCLIP13.66□□□□□ -0.22
SIN3B-210ENST00000599880 PTPN12Q05209 780 aaKnown RBP13.66□□□□□ -0.22
SIN3B-210ENST00000599880 NOGQ13253 232 aa13.66□□□□□ -0.22
SIN3B-210ENST00000599880 APOBEC3FQ8IUX4 373 aaKnown RBP13.66□□□□□ -0.22
SIN3B-210ENST00000599880 LAMB1P07942 1786 aa13.66□□□□□ -0.22
SIN3B-210ENST00000599880 EYA2O00167 538 aa13.65□□□□□ -0.22
SIN3B-210ENST00000599880 GYG1P46976 350 aa13.65□□□□□ -0.22
SIN3B-210ENST00000599880 GRM1Q13255 1194 aa13.65□□□□□ -0.22
SIN3B-210ENST00000599880 RGMBQ6NW40 437 aa13.65□□□□□ -0.22
SIN3B-210ENST00000599880 KLHDC4Q8TBB5 520 aa13.65□□□□□ -0.22
SIN3B-210ENST00000599880 BEGAINQ9BUH8 593 aa13.65□□□□□ -0.22
SIN3B-210ENST00000599880 CA12O43570 354 aa13.64□□□□□ -0.23
SIN3B-210ENST00000599880 AOC2O75106 756 aa13.64□□□□□ -0.23
SIN3B-210ENST00000599880 PUM3Q15397 648 aaKnown RBP13.64□□□□□ -0.23
SIN3B-210ENST00000599880 DLGAP5Q15398 846 aa13.64□□□□□ -0.23
SIN3B-210ENST00000599880 CAVIN4Q5BKX8 364 aa13.64□□□□□ -0.23
SIN3B-210ENST00000599880 FBXO33Q7Z6M2 555 aa13.64□□□□□ -0.23
SIN3B-210ENST00000599880 CCDC102AQ96A19 550 aa13.64□□□□□ -0.23
SIN3B-210ENST00000599880 ZBED9Q6R2W3 1325 aa13.64□□□□□ -0.23
SIN3B-210ENST00000599880 FAM155AB1AL88 458 aaPredicted RBP13.63□□□□□ -0.23
SIN3B-210ENST00000599880 CIAO1O76071 339 aa13.63□□□□□ -0.23
SIN3B-210ENST00000599880 GNAI3P08754 354 aa13.63□□□□□ -0.23
SIN3B-210ENST00000599880 IFIT1P09914 478 aaKnown RBP13.63□□□□□ -0.23
SIN3B-210ENST00000599880 HSPA8P11142 646 aaKnown RBP13.63□□□□□ -0.23
SIN3B-210ENST00000599880 TRIM27P14373 513 aa13.63□□□□□ -0.23
SIN3B-210ENST00000599880 FGFR2P21802 821 aa13.63□□□□□ -0.23
SIN3B-210ENST00000599880 NF2P35240 595 aa13.63□□□□□ -0.23
SIN3B-210ENST00000599880 MFSD14BQ5SR56 506 aa13.63□□□□□ -0.23
SIN3B-210ENST00000599880 ATF7IPQ6VMQ6 1270 aa13.63□□□□□ -0.23
SIN3B-210ENST00000599880 VPS37DQ86XT2 251 aa13.63□□□□□ -0.23
SIN3B-210ENST00000599880 TNS4Q8IZW8 715 aa13.63□□□□□ -0.23
SIN3B-210ENST00000599880 MEIS3Q99687 375 aa13.63□□□□□ -0.23
SIN3B-210ENST00000599880 LRRFIP2Q9Y608 721 aaKnown RBP13.63□□□□□ -0.23
SIN3B-210ENST00000599880 SPDYE2BA6NHP3 402 aa13.62□□□□□ -0.23
SIN3B-210ENST00000599880 MYO1BO43795 1136 aa13.62□□□□□ -0.23
SIN3B-210ENST00000599880 SLC10A3P09131 477 aa13.62□□□□□ -0.23
SIN3B-210ENST00000599880 SPDYE6P0CI01 402 aa13.62□□□□□ -0.23
SIN3B-210ENST00000599880 MTX1Q13505 466 aa13.62□□□□□ -0.23
SIN3B-210ENST00000599880 CFAP100Q494V2 611 aa13.62□□□□□ -0.23
SIN3B-210ENST00000599880 ATG9AQ7Z3C6 839 aa13.62□□□□□ -0.23
SIN3B-210ENST00000599880 TBC1D22AQ8WUA7 517 aa13.62□□□□□ -0.23
SIN3B-210ENST00000599880 LPIN2Q92539 896 aa13.62□□□□□ -0.23
SIN3B-210ENST00000599880 SERPINA10Q9UK55 444 aa13.62□□□□□ -0.23
SIN3B-210ENST00000599880 PPP2R3BQ9Y5P8 575 aa13.62□□□□□ -0.23
SIN3B-210ENST00000599880 F8W031 263 aaPredicted RBP13.61□□□□□ -0.23
SIN3B-210ENST00000599880 BCAR3O75815 825 aa13.61□□□□□ -0.23
SIN3B-210ENST00000599880 SLC5A1P13866 664 aa13.61□□□□□ -0.23
SIN3B-210ENST00000599880 ZNF157P51786 506 aaPredicted RBP13.61□□□□□ -0.23
SIN3B-210ENST00000599880 LBX1P52954 281 aa13.61□□□□□ -0.23
SIN3B-210ENST00000599880 COPRSQ9NQ92 184 aa13.61□□□□□ -0.23
SIN3B-210ENST00000599880 JAG2Q9Y219 1238 aa13.61□□□□□ -0.23
SIN3B-210ENST00000599880 ZBTB22O15209 634 aa13.6□□□□□ -0.23
SIN3B-210ENST00000599880 IL15P40933 162 aaPredicted RBP13.6□□□□□ -0.23
SIN3B-210ENST00000599880 HDLBPQ00341 1268 aaKnown RBP13.6□□□□□ -0.23
SIN3B-210ENST00000599880 REM2Q8IYK8 340 aaPredicted RBP13.6□□□□□ -0.23
SIN3B-210ENST00000599880 TTF2Q9UNY4 1162 aaKnown RBP13.6□□□□□ -0.23
SIN3B-210ENST00000599880 SCAF8Q9UPN6 1271 aaKnown RBP13.6□□□□□ -0.23
SIN3B-210ENST00000599880 SUGT1Q9Y2Z0 365 aa13.6□□□□□ -0.23
SIN3B-210ENST00000599880 OTOFQ9HC10 1997 aa13.6□□□□□ -0.23
SIN3B-210ENST00000599880 FRAT2O75474 233 aaPredicted RBP13.59□□□□□ -0.23
SIN3B-210ENST00000599880 BCAMP50895 628 aa13.59□□□□□ -0.23
SIN3B-210ENST00000599880 ZKSCAN2Q63HK3 967 aa13.59□□□□□ -0.23
SIN3B-210ENST00000599880 RASAL3Q86YV0 1011 aa13.59□□□□□ -0.23
SIN3B-210ENST00000599880 FRAT1Q92837 279 aaPredicted RBP13.59□□□□□ -0.23
SIN3B-210ENST00000599880 PRMT6Q96LA8 375 aaPredicted RBP13.59□□□□□ -0.23
SIN3B-210ENST00000599880 SIL1Q9H173 461 aa13.59□□□□□ -0.23
SIN3B-210ENST00000599880 DEFB129Q9H1M3 183 aa13.59□□□□□ -0.23
SIN3B-210ENST00000599880 CEP126Q9P2H0 1117 aa13.59□□□□□ -0.23
SIN3B-210ENST00000599880 PCDHAC2Q9Y5I4 1007 aa13.59□□□□□ -0.23
SIN3B-210ENST00000599880 MAST3O60307 1309 aa13.59□□□□□ -0.23
SIN3B-210ENST00000599880 SSC5DA1L4H1 1573 aa13.58□□□□□ -0.23
SIN3B-210ENST00000599880 CASP8AP2Q9UKL3 1982 aa13.58□□□□□ -0.24
SIN3B-210ENST00000599880 RBM5P52756 815 aaKnown RBP eCLIP13.58□□□□□ -0.24
SIN3B-210ENST00000599880 TNFAIP1Q13829 316 aa13.58□□□□□ -0.24
SIN3B-210ENST00000599880 SPDYE2Q495Y8 402 aa13.58□□□□□ -0.24
SIN3B-210ENST00000599880 PRAMEF18Q5VWM3 479 aa13.58□□□□□ -0.24
SIN3B-210ENST00000599880 ARMC9Q7Z3E5 817 aa13.58□□□□□ -0.24
SIN3B-210ENST00000599880 ZIC5Q96T25 663 aa13.58□□□□□ -0.24
SIN3B-210ENST00000599880 MRIQ9BWK5 157 aa13.58□□□□□ -0.24
SIN3B-210ENST00000599880 SAGE1Q9NXZ1 904 aa13.58□□□□□ -0.24
SIN3B-210ENST00000599880 IQSEC3Q9UPP2 1182 aaPredicted RBP13.58□□□□□ -0.24
SIN3B-210ENST00000599880 SRGAP3O43295 1099 aa13.57□□□□□ -0.24
SIN3B-210ENST00000599880 GNAI2P04899 355 aa13.57□□□□□ -0.24
SIN3B-210ENST00000599880 CRKP46108 304 aa13.57□□□□□ -0.24
SIN3B-210ENST00000599880 KIF23Q02241 960 aaPredicted RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms