RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, human

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IRF3-223	ENST00000599223	HDAC9	Q9UKV0	1011 aa		18.64	■□□□□ 0.57
IRF3-223	ENST00000599223		F8W031	263 aa	Predicted RBP	18.63	■□□□□ 0.57
IRF3-223	ENST00000599223	IL1R1	P14778	569 aa		18.63	■□□□□ 0.57
IRF3-223	ENST00000599223	PTPN12	Q05209	780 aa	Known RBP	18.63	■□□□□ 0.57
IRF3-223	ENST00000599223	FAM9B	Q8IZU0	186 aa		18.63	■□□□□ 0.57
IRF3-223	ENST00000599223	ZNF521	Q96K83	1311 aa		18.63	■□□□□ 0.57
IRF3-223	ENST00000599223	REM2	Q8IYK8	340 aa	Predicted RBP	18.62	■□□□□ 0.57
IRF3-223	ENST00000599223	SUCLG2	Q96I99	432 aa		18.62	■□□□□ 0.57
IRF3-223	ENST00000599223	PDE4DIP	Q5VU43	2346 aa		18.62	■□□□□ 0.57
IRF3-223	ENST00000599223	CLRN2	A0PK11	232 aa		18.61	■□□□□ 0.57
IRF3-223	ENST00000599223	TBC1D8	O95759	1140 aa		18.61	■□□□□ 0.57
IRF3-223	ENST00000599223	NF2	P35240	595 aa		18.61	■□□□□ 0.57
IRF3-223	ENST00000599223	MMP14	P50281	582 aa		18.61	■□□□□ 0.57
IRF3-223	ENST00000599223	SOX10	P56693	466 aa		18.61	■□□□□ 0.57
IRF3-223	ENST00000599223	DLGAP5	Q15398	846 aa		18.61	■□□□□ 0.57
IRF3-223	ENST00000599223	SLC4A10	Q6U841	1118 aa		18.61	■□□□□ 0.57
IRF3-223	ENST00000599223	ZNF804A	Q7Z570	1209 aa		18.61	■□□□□ 0.57
IRF3-223	ENST00000599223	CTU1	Q7Z7A3	348 aa	Known RBP	18.61	■□□□□ 0.57
IRF3-223	ENST00000599223	MTMR14	Q8NCE2	650 aa		18.61	■□□□□ 0.57
IRF3-223	ENST00000599223	DEFB129	Q9H1M3	183 aa		18.61	■□□□□ 0.57
IRF3-223	ENST00000599223	SPDYE2B	A6NHP3	402 aa		18.6	■□□□□ 0.57
IRF3-223	ENST00000599223	PLIN1	O60240	522 aa		18.6	■□□□□ 0.57
IRF3-223	ENST00000599223	ALDH1L1	O75891	902 aa		18.6	■□□□□ 0.57
IRF3-223	ENST00000599223	SPDYE6	P0CI01	402 aa		18.6	■□□□□ 0.57
IRF3-223	ENST00000599223	CCDC57	Q2TAC2	916 aa		18.6	■□□□□ 0.57
IRF3-223	ENST00000599223	CFAP100	Q494V2	611 aa		18.6	■□□□□ 0.57
IRF3-223	ENST00000599223	TAF7L	Q5H9L4	462 aa		18.6	■□□□□ 0.57
IRF3-223	ENST00000599223	LDLRAD1	Q5T700	205 aa		18.6	■□□□□ 0.57
IRF3-223	ENST00000599223	LDHAL6A	Q6ZMR3	332 aa		18.6	■□□□□ 0.57
IRF3-223	ENST00000599223	PUS3	Q9BZE2	481 aa	Known RBP	18.6	■□□□□ 0.57
IRF3-223	ENST00000599223	CNNM1	Q9NRU3	951 aa		18.6	■□□□□ 0.57
IRF3-223	ENST00000599223	ANGEL1	Q9UNK9	670 aa	Known RBP	18.6	■□□□□ 0.57
IRF3-223	ENST00000599223	NBPF7	P0C2Y1	421 aa	Predicted RBP	18.59	■□□□□ 0.57
IRF3-223	ENST00000599223	TM4SF4	P48230	202 aa		18.59	■□□□□ 0.57
IRF3-223	ENST00000599223	ZNF296	Q8WUU4	475 aa	Predicted RBP	18.59	■□□□□ 0.57
IRF3-223	ENST00000599223	CLMN	Q96JQ2	1002 aa		18.59	■□□□□ 0.57
IRF3-223	ENST00000599223	PRMT6	Q96LA8	375 aa	Predicted RBP	18.59	■□□□□ 0.57
IRF3-223	ENST00000599223	SRCIN1	Q9C0H9	1055 aa		18.59	■□□□□ 0.57
IRF3-223	ENST00000599223	R3HDML	Q9H3Y0	253 aa		18.59	■□□□□ 0.57
IRF3-223	ENST00000599223	C9orf78	Q9NZ63	289 aa	Predicted RBP	18.59	■□□□□ 0.57
IRF3-223	ENST00000599223	GYG1	P46976	350 aa		18.58	■□□□□ 0.56
IRF3-223	ENST00000599223	FKBP1A	P62942	108 aa	Known RBP	18.58	■□□□□ 0.56
IRF3-223	ENST00000599223	SPRYD7	Q5W111	196 aa		18.58	■□□□□ 0.56
IRF3-223	ENST00000599223	ARMC9	Q7Z3E5	817 aa		18.58	■□□□□ 0.56
IRF3-223	ENST00000599223	CENPF	P49454	3210 aa		18.57	■□□□□ 0.56
IRF3-223	ENST00000599223	UTY	O14607	1347 aa		18.57	■□□□□ 0.56
IRF3-223	ENST00000599223	FAM205A	Q6ZU69	1335 aa		18.56	■□□□□ 0.56
IRF3-223	ENST00000599223	CDAN1	Q8IWY9	1227 aa		18.56	■□□□□ 0.56
IRF3-223	ENST00000599223	ANKRD44	Q8N8A2	993 aa		18.56	■□□□□ 0.56
IRF3-223	ENST00000599223	TDRD7	Q8NHU6	1098 aa	Known RBP	18.56	■□□□□ 0.56
IRF3-223	ENST00000599223	BICC1	Q9H694	974 aa	Known RBP	18.56	■□□□□ 0.56
IRF3-223	ENST00000599223	VEZT	Q9HBM0	779 aa		18.56	■□□□□ 0.56
IRF3-223	ENST00000599223	MYH13	Q9UKX3	1938 aa		18.55	■□□□□ 0.56
IRF3-223	ENST00000599223	GPR25	O00155	361 aa		18.55	■□□□□ 0.56
IRF3-223	ENST00000599223	SREBF2	Q12772	1141 aa		18.55	■□□□□ 0.56
IRF3-223	ENST00000599223	GRIK5	Q16478	980 aa		18.55	■□□□□ 0.56
IRF3-223	ENST00000599223	MAP3K11	Q16584	847 aa		18.55	■□□□□ 0.56
IRF3-223	ENST00000599223	RABL6	Q3YEC7	729 aa	Predicted RBP	18.55	■□□□□ 0.56
IRF3-223	ENST00000599223	MFSD14B	Q5SR56	506 aa		18.55	■□□□□ 0.56
IRF3-223	ENST00000599223	NBPF12	Q5TAG4	269 aa	Predicted RBP	18.55	■□□□□ 0.56
IRF3-223	ENST00000599223	FAM84B	Q96KN1	310 aa	Predicted RBP	18.55	■□□□□ 0.56
IRF3-223	ENST00000599223	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	18.55	■□□□□ 0.56
IRF3-223	ENST00000599223	HPS5	Q9UPZ3	1129 aa		18.55	■□□□□ 0.56
IRF3-223	ENST00000599223	PPP2R3B	Q9Y5P8	575 aa		18.55	■□□□□ 0.56
IRF3-223	ENST00000599223	UBE4A	Q14139	1066 aa		18.54	■□□□□ 0.56
IRF3-223	ENST00000599223	MRPL50	Q8N5N7	158 aa	Known RBP	18.54	■□□□□ 0.56
IRF3-223	ENST00000599223	WNK4	Q96J92	1243 aa		18.54	■□□□□ 0.56
IRF3-223	ENST00000599223	RIPOR2	Q9Y4F9	1068 aa		18.54	■□□□□ 0.56
IRF3-223	ENST00000599223	BRCA2	P51587	3418 aa		18.54	■□□□□ 0.56
IRF3-223	ENST00000599223	GJA5	P36382	358 aa		18.53	■□□□□ 0.56
IRF3-223	ENST00000599223	RASA3	Q14644	834 aa		18.53	■□□□□ 0.56
IRF3-223	ENST00000599223	SPDYE2	Q495Y8	402 aa		18.53	■□□□□ 0.56
IRF3-223	ENST00000599223	LRRC24	Q50LG9	513 aa		18.53	■□□□□ 0.56
IRF3-223	ENST00000599223	NOM1	Q5C9Z4	860 aa	Known RBP	18.53	■□□□□ 0.56
IRF3-223	ENST00000599223	CFHR5	Q9BXR6	569 aa		18.53	■□□□□ 0.56
IRF3-223	ENST00000599223	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	18.53	■□□□□ 0.56
IRF3-223	ENST00000599223	MKI67	P46013	3256 aa	Known RBP	18.52	■□□□□ 0.56
IRF3-223	ENST00000599223	IGF2BP3	O00425	579 aa	Known RBP eCLIP	18.52	■□□□□ 0.56
IRF3-223	ENST00000599223	MYO1B	O43795	1136 aa		18.52	■□□□□ 0.56
IRF3-223	ENST00000599223	HIBADH	P31937	336 aa	Known RBP	18.52	■□□□□ 0.56
IRF3-223	ENST00000599223	RBM5	P52756	815 aa	Known RBP eCLIP	18.52	■□□□□ 0.56
IRF3-223	ENST00000599223	DIEXF	Q68CQ4	756 aa	Known RBP	18.52	■□□□□ 0.56
IRF3-223	ENST00000599223	VGLL2	Q8N8G2	317 aa		18.52	■□□□□ 0.56
IRF3-223	ENST00000599223	KLHDC4	Q8TBB5	520 aa		18.52	■□□□□ 0.56
IRF3-223	ENST00000599223	TTF2	Q9UNY4	1162 aa	Known RBP	18.52	■□□□□ 0.56
IRF3-223	ENST00000599223	SSH1	Q8WYL5	1049 aa		18.51	■□□□□ 0.55
IRF3-223	ENST00000599223	ZNF70	Q9UC06	446 aa	Predicted RBP	18.51	■□□□□ 0.55
IRF3-223	ENST00000599223	MROH5	Q6ZUA9	1318 aa		18.5	■□□□□ 0.55
IRF3-223	ENST00000599223	ZBTB48	P10074	688 aa	Predicted RBP	18.5	■□□□□ 0.55
IRF3-223	ENST00000599223	IFNL1	Q8IU54	200 aa		18.5	■□□□□ 0.55
IRF3-223	ENST00000599223	SLC10A4	Q96EP9	437 aa		18.5	■□□□□ 0.55
IRF3-223	ENST00000599223	TEPSIN	Q96N21	525 aa		18.5	■□□□□ 0.55
IRF3-223	ENST00000599223	TDRD3	Q9H7E2	651 aa	Known RBP	18.5	■□□□□ 0.55
IRF3-223	ENST00000599223	SERPINA10	Q9UK55	444 aa		18.5	■□□□□ 0.55
IRF3-223	ENST00000599223	MANSC4	A6NHS7	340 aa	Predicted RBP	18.49	■□□□□ 0.55
IRF3-223	ENST00000599223	PPP1R12B	O60237	982 aa	Predicted RBP	18.49	■□□□□ 0.55
IRF3-223	ENST00000599223	FKTN	O75072	461 aa		18.49	■□□□□ 0.55
IRF3-223	ENST00000599223	USP2	O75604	605 aa	Predicted RBP	18.49	■□□□□ 0.55
IRF3-223	ENST00000599223	SLC34A2	O95436	690 aa		18.49	■□□□□ 0.55
IRF3-223	ENST00000599223	FBXO33	Q7Z6M2	555 aa		18.49	■□□□□ 0.55

Retrieved 100 of 20,778 RNA–protein pairs in 117.1 ms