RNA–Protein interactions for RNA: ENST00000598886.1

SMG9-208, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 681 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-208ENST00000598886 MRPL50Q8N5N7 158 aaKnown RBP19.88■□□□□ 0.77
SMG9-208ENST00000598886 TRPA1O75762 1119 aa19.87■□□□□ 0.77
SMG9-208ENST00000598886 LDHAL6AQ6ZMR3 332 aa19.87■□□□□ 0.77
SMG9-208ENST00000598886 APOBEC3FQ8IUX4 373 aaKnown RBP19.87■□□□□ 0.77
SMG9-208ENST00000598886 CHMP3Q9Y3E7 222 aa19.87■□□□□ 0.77
SMG9-208ENST00000598886 FAM205AQ6ZU69 1335 aa19.86■□□□□ 0.77
SMG9-208ENST00000598886 CCDC57Q2TAC2 916 aa19.86■□□□□ 0.77
SMG9-208ENST00000598886 SLC4A10Q6U841 1118 aa19.86■□□□□ 0.77
SMG9-208ENST00000598886 ZNF804AQ7Z570 1209 aa19.86■□□□□ 0.77
SMG9-208ENST00000598886 REM2Q8IYK8 340 aaPredicted RBP19.86■□□□□ 0.77
SMG9-208ENST00000598886 ANKRD44Q8N8A2 993 aa19.86■□□□□ 0.77
SMG9-208ENST00000598886 PUS3Q9BZE2 481 aaKnown RBP19.86■□□□□ 0.77
SMG9-208ENST00000598886 C9orf78Q9NZ63 289 aaPredicted RBP19.86■□□□□ 0.77
SMG9-208ENST00000598886 HDAC9Q9UKV0 1011 aa19.86■□□□□ 0.77
SMG9-208ENST00000598886 DGKZQ13574 1117 aa19.85■□□□□ 0.77
SMG9-208ENST00000598886 LDLRAD1Q5T700 205 aa19.85■□□□□ 0.77
SMG9-208ENST00000598886 RIPOR2Q9Y4F9 1068 aa19.85■□□□□ 0.77
SMG9-208ENST00000598886 MYH13Q9UKX3 1938 aa19.84■□□□□ 0.77
SMG9-208ENST00000598886 SPDYE2BA6NHP3 402 aa19.84■□□□□ 0.77
SMG9-208ENST00000598886 CCDC85CA6NKD9 419 aa19.84■□□□□ 0.77
SMG9-208ENST00000598886 SPDYE6P0CI01 402 aa19.84■□□□□ 0.77
SMG9-208ENST00000598886 TDRD7Q8NHU6 1098 aaKnown RBP19.84■□□□□ 0.77
SMG9-208ENST00000598886 PTPN12Q05209 780 aaKnown RBP19.83■□□□□ 0.77
SMG9-208ENST00000598886 UBE4AQ14139 1066 aa19.83■□□□□ 0.77
SMG9-208ENST00000598886 VGLL2Q8N8G2 317 aa19.83■□□□□ 0.77
SMG9-208ENST00000598886 PRMT6Q96LA8 375 aaPredicted RBP19.83■□□□□ 0.77
SMG9-208ENST00000598886 DEFB129Q9H1M3 183 aa19.83■□□□□ 0.77
SMG9-208ENST00000598886 BICC1Q9H694 974 aaKnown RBP19.83■□□□□ 0.77
SMG9-208ENST00000598886 CNNM1Q9NRU3 951 aa19.83■□□□□ 0.77
SMG9-208ENST00000598886 JAG2Q9Y219 1238 aa19.83■□□□□ 0.77
SMG9-208ENST00000598886 TM4SF4P48230 202 aa19.82■□□□□ 0.76
SMG9-208ENST00000598886 SLFN5Q08AF3 891 aa19.82■□□□□ 0.76
SMG9-208ENST00000598886 DLGAP5Q15398 846 aa19.82■□□□□ 0.76
SMG9-208ENST00000598886 MAP3K11Q16584 847 aa19.82■□□□□ 0.76
SMG9-208ENST00000598886 CFAP100Q494V2 611 aa19.82■□□□□ 0.76
SMG9-208ENST00000598886 SSH1Q8WYL5 1049 aa19.82■□□□□ 0.76
SMG9-208ENST00000598886 FAM84BQ96KN1 310 aaPredicted RBP19.82■□□□□ 0.76
SMG9-208ENST00000598886 FZD1Q9UP38 647 aa19.82■□□□□ 0.76
SMG9-208ENST00000598886 PTPRCP08575 1304 aa19.81■□□□□ 0.76
SMG9-208ENST00000598886 PLIN1O60240 522 aa19.81■□□□□ 0.76
SMG9-208ENST00000598886 GYG1P46976 350 aa19.81■□□□□ 0.76
SMG9-208ENST00000598886 PPP2R3BQ9Y5P8 575 aa19.81■□□□□ 0.76
SMG9-208ENST00000598886 E9PSI1 815 aa19.8■□□□□ 0.76
SMG9-208ENST00000598886 F8W031 263 aaPredicted RBP19.8■□□□□ 0.76
SMG9-208ENST00000598886 NF2P35240 595 aa19.8■□□□□ 0.76
SMG9-208ENST00000598886 TAF7LQ5H9L4 462 aa19.8■□□□□ 0.76
SMG9-208ENST00000598886 TRMT2AQ8IZ69 625 aaKnown RBP19.8■□□□□ 0.76
SMG9-208ENST00000598886 CFHR5Q9BXR6 569 aa19.8■□□□□ 0.76
SMG9-208ENST00000598886 USP44Q9H0E7 712 aa19.8■□□□□ 0.76
SMG9-208ENST00000598886 HTTP42858 3142 aa19.8■□□□□ 0.76
SMG9-208ENST00000598886 TTLL12Q14166 644 aaPredicted RBP19.79■□□□□ 0.76
SMG9-208ENST00000598886 LRRC24Q50LG9 513 aa19.79■□□□□ 0.76
SMG9-208ENST00000598886 MROH5Q6ZUA9 1318 aa19.78■□□□□ 0.76
SMG9-208ENST00000598886 CLRN2A0PK11 232 aa19.78■□□□□ 0.76
SMG9-208ENST00000598886 PRKG1Q13976 671 aa19.78■□□□□ 0.76
SMG9-208ENST00000598886 GRIK5Q16478 980 aa19.78■□□□□ 0.76
SMG9-208ENST00000598886 NOM1Q5C9Z4 860 aaKnown RBP19.78■□□□□ 0.76
SMG9-208ENST00000598886 SPRYD7Q5W111 196 aa19.78■□□□□ 0.76
SMG9-208ENST00000598886 ARMC9Q7Z3E5 817 aa19.78■□□□□ 0.76
SMG9-208ENST00000598886 FBXO33Q7Z6M2 555 aa19.78■□□□□ 0.76
SMG9-208ENST00000598886 ANGEL1Q9UNK9 670 aaKnown RBP19.78■□□□□ 0.76
SMG9-208ENST00000598886 HIBADHP31937 336 aaKnown RBP19.77■□□□□ 0.76
SMG9-208ENST00000598886 SPDYE2Q495Y8 402 aa19.77■□□□□ 0.76
SMG9-208ENST00000598886 MFSD14BQ5SR56 506 aa19.77■□□□□ 0.76
SMG9-208ENST00000598886 CTU1Q7Z7A3 348 aaKnown RBP19.77■□□□□ 0.76
SMG9-208ENST00000598886 CDCA7LQ96GN5 454 aa19.77■□□□□ 0.76
SMG9-208ENST00000598886 CLMNQ96JQ2 1002 aa19.77■□□□□ 0.76
SMG9-208ENST00000598886 TBC1D8O95759 1140 aa19.76■□□□□ 0.75
SMG9-208ENST00000598886 RFX5P48382 616 aaPredicted RBP19.76■□□□□ 0.75
SMG9-208ENST00000598886 MKRN3Q13064 507 aaKnown RBP19.76■□□□□ 0.75
SMG9-208ENST00000598886 NBPF12Q5TAG4 269 aaPredicted RBP19.76■□□□□ 0.75
SMG9-208ENST00000598886 KLHDC4Q8TBB5 520 aa19.76■□□□□ 0.75
SMG9-208ENST00000598886 ZNF296Q8WUU4 475 aaPredicted RBP19.76■□□□□ 0.75
SMG9-208ENST00000598886 R3HDMLQ9H3Y0 253 aa19.76■□□□□ 0.75
SMG9-208ENST00000598886 SERPINA10Q9UK55 444 aa19.76■□□□□ 0.75
SMG9-208ENST00000598886 ALDH1L2Q3SY69 923 aa19.75■□□□□ 0.75
SMG9-208ENST00000598886 CDAN1Q8IWY9 1227 aa19.75■□□□□ 0.75
SMG9-208ENST00000598886 TEPSINQ96N21 525 aa19.75■□□□□ 0.75
SMG9-208ENST00000598886 UNCXA6NJT0 531 aa19.74■□□□□ 0.75
SMG9-208ENST00000598886 PDE8BO95263 885 aa19.74■□□□□ 0.75
SMG9-208ENST00000598886 FGFR2P21802 821 aa19.74■□□□□ 0.75
SMG9-208ENST00000598886 RASA3Q14644 834 aa19.74■□□□□ 0.75
SMG9-208ENST00000598886 ZNF70Q9UC06 446 aaPredicted RBP19.74■□□□□ 0.75
SMG9-208ENST00000598886 TTF2Q9UNY4 1162 aaKnown RBP19.74■□□□□ 0.75
SMG9-208ENST00000598886 KIF16BQ96L93 1317 aa19.74■□□□□ 0.75
SMG9-208ENST00000598886 MYO1BO43795 1136 aa19.73■□□□□ 0.75
SMG9-208ENST00000598886 USP2O75604 605 aaPredicted RBP19.73■□□□□ 0.75
SMG9-208ENST00000598886 GJA5P36382 358 aa19.73■□□□□ 0.75
SMG9-208ENST00000598886 MLLT1Q03111 559 aaPredicted RBP19.73■□□□□ 0.75
SMG9-208ENST00000598886 SREBF2Q12772 1141 aa19.73■□□□□ 0.75
SMG9-208ENST00000598886 WNK4Q96J92 1243 aa19.73■□□□□ 0.75
SMG9-208ENST00000598886 VEZTQ9HBM0 779 aa19.73■□□□□ 0.75
SMG9-208ENST00000598886 GPR25O00155 361 aa19.72■□□□□ 0.75
SMG9-208ENST00000598886 ZBTB48P10074 688 aaPredicted RBP19.72■□□□□ 0.75
SMG9-208ENST00000598886 METTL24Q5JXM2 366 aa19.72■□□□□ 0.75
SMG9-208ENST00000598886 DZIP1LQ8IYY4 767 aaKnown RBP19.72■□□□□ 0.75
SMG9-208ENST00000598886 IQSEC3Q9UPP2 1182 aaPredicted RBP19.72■□□□□ 0.75
SMG9-208ENST00000598886 IGF2BP3O00425 579 aaKnown RBP eCLIP19.71■□□□□ 0.75
SMG9-208ENST00000598886 CRKP46108 304 aa19.71■□□□□ 0.75
SMG9-208ENST00000598886 TDRD3Q9H7E2 651 aaKnown RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms