RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 MROH5Q6ZUA9 1318 aa23.8■■□□□ 1.4
CCDC43-205ENST00000592333 CASP8AP2Q9UKL3 1982 aa23.8■■□□□ 1.4
CCDC43-205ENST00000592333 MYO1BO43795 1136 aa23.79■■□□□ 1.4
CCDC43-205ENST00000592333 TRPA1O75762 1119 aa23.79■■□□□ 1.4
CCDC43-205ENST00000592333 RGS19P49795 217 aa23.79■■□□□ 1.4
CCDC43-205ENST00000592333 CERS5Q8N5B7 392 aa23.79■■□□□ 1.4
CCDC43-205ENST00000592333 MRPL50Q8N5N7 158 aaKnown RBP23.79■■□□□ 1.4
CCDC43-205ENST00000592333 ZNF594Q96JF6 807 aaPredicted RBP23.79■■□□□ 1.4
CCDC43-205ENST00000592333 FAM205AQ6ZU69 1335 aa23.79■■□□□ 1.4
CCDC43-205ENST00000592333 UBE2Q2LH0YL09 131 aa23.78■■□□□ 1.4
CCDC43-205ENST00000592333 SNAP23O00161 211 aa23.78■■□□□ 1.4
CCDC43-205ENST00000592333 NBPF7P0C2Y1 421 aaPredicted RBP23.78■■□□□ 1.4
CCDC43-205ENST00000592333 DGKZQ13574 1117 aa23.78■■□□□ 1.4
CCDC43-205ENST00000592333 TTLL12Q14166 644 aaPredicted RBP23.78■■□□□ 1.4
CCDC43-205ENST00000592333 KAZALD1Q96I82 304 aa23.78■■□□□ 1.4
CCDC43-205ENST00000592333 TM4SF4P48230 202 aa23.77■■□□□ 1.4
CCDC43-205ENST00000592333 TDRD7Q8NHU6 1098 aaKnown RBP23.77■■□□□ 1.4
CCDC43-205ENST00000592333 SUCLG2Q96I99 432 aa23.77■■□□□ 1.4
CCDC43-205ENST00000592333 DEFB129Q9H1M3 183 aa23.77■■□□□ 1.4
CCDC43-205ENST00000592333 RIPOR2Q9Y4F9 1068 aa23.77■■□□□ 1.4
CCDC43-205ENST00000592333 CCDC85CA6NKD9 419 aa23.76■■□□□ 1.39
CCDC43-205ENST00000592333 MAP3K11Q16584 847 aa23.76■■□□□ 1.39
CCDC43-205ENST00000592333 ALDH1L2Q3SY69 923 aa23.76■■□□□ 1.39
CCDC43-205ENST00000592333 NOM1Q5C9Z4 860 aaKnown RBP23.76■■□□□ 1.39
CCDC43-205ENST00000592333 LDLRAD1Q5T700 205 aa23.76■■□□□ 1.39
CCDC43-205ENST00000592333 PRAMEF18Q5VWM3 479 aa23.76■■□□□ 1.39
CCDC43-205ENST00000592333 SCAF8Q9UPN6 1271 aaKnown RBP23.76■■□□□ 1.39
CCDC43-205ENST00000592333 SPDYE2BA6NHP3 402 aa23.75■■□□□ 1.39
CCDC43-205ENST00000592333 SPDYE6P0CI01 402 aa23.75■■□□□ 1.39
CCDC43-205ENST00000592333 HIBADHP31937 336 aaKnown RBP23.75■■□□□ 1.39
CCDC43-205ENST00000592333 MOB2Q70IA6 237 aa23.75■■□□□ 1.39
CCDC43-205ENST00000592333 PLIN1O60240 522 aa23.74■■□□□ 1.39
CCDC43-205ENST00000592333 SLFN5Q08AF3 891 aa23.74■■□□□ 1.39
CCDC43-205ENST00000592333 SREBF2Q12772 1141 aa23.74■■□□□ 1.39
CCDC43-205ENST00000592333 SUPT20HL1Q3ZLR7 823 aa23.74■■□□□ 1.39
CCDC43-205ENST00000592333 CFAP100Q494V2 611 aa23.74■■□□□ 1.39
CCDC43-205ENST00000592333 ECM29Q5VYK3 1845 aa23.74■■□□□ 1.39
CCDC43-205ENST00000592333 PPP1R12BO60237 982 aaPredicted RBP23.73■■□□□ 1.39
CCDC43-205ENST00000592333 CT47B1P0C2W7 299 aaPredicted RBP23.73■■□□□ 1.39
CCDC43-205ENST00000592333 POTEDQ86YR6 584 aa23.73■■□□□ 1.39
CCDC43-205ENST00000592333 FAM84BQ96KN1 310 aaPredicted RBP23.73■■□□□ 1.39
CCDC43-205ENST00000592333 CFHR5Q9BXR6 569 aa23.73■■□□□ 1.39
CCDC43-205ENST00000592333 BICC1Q9H694 974 aaKnown RBP23.73■■□□□ 1.39
CCDC43-205ENST00000592333 SERPINA10Q9UK55 444 aa23.73■■□□□ 1.39
CCDC43-205ENST00000592333 INHBEP58166 350 aa23.72■■□□□ 1.39
CCDC43-205ENST00000592333 PTPN12Q05209 780 aaKnown RBP23.72■■□□□ 1.39
CCDC43-205ENST00000592333 TNFAIP1Q13829 316 aa23.71■■□□□ 1.39
CCDC43-205ENST00000592333 MFSD14BQ5SR56 506 aa23.71■■□□□ 1.39
CCDC43-205ENST00000592333 SSH1Q8WYL5 1049 aa23.71■■□□□ 1.39
CCDC43-205ENST00000592333 PRMT6Q96LA8 375 aaPredicted RBP23.71■■□□□ 1.39
CCDC43-205ENST00000592333 PUS3Q9BZE2 481 aaKnown RBP23.71■■□□□ 1.39
CCDC43-205ENST00000592333 KIF16BQ96L93 1317 aa23.7■■□□□ 1.38
CCDC43-205ENST00000592333 PKN2Q16513 984 aaKnown RBP23.7■■□□□ 1.38
CCDC43-205ENST00000592333 CAVIN4Q5BKX8 364 aa23.7■■□□□ 1.38
CCDC43-205ENST00000592333 FBXO33Q7Z6M2 555 aa23.7■■□□□ 1.38
CCDC43-205ENST00000592333 CTU1Q7Z7A3 348 aaKnown RBP23.7■■□□□ 1.38
CCDC43-205ENST00000592333 ANKRD44Q8N8A2 993 aa23.7■■□□□ 1.38
CCDC43-205ENST00000592333 USP44Q9H0E7 712 aa23.7■■□□□ 1.38
CCDC43-205ENST00000592333 ANGEL1Q9UNK9 670 aaKnown RBP23.7■■□□□ 1.38
CCDC43-205ENST00000592333 F8W031 263 aaPredicted RBP23.69■■□□□ 1.38
CCDC43-205ENST00000592333 PDE8BO95263 885 aa23.69■■□□□ 1.38
CCDC43-205ENST00000592333 ALDH1A1P00352 501 aa23.69■■□□□ 1.38
CCDC43-205ENST00000592333 ZBTB48P10074 688 aaPredicted RBP23.69■■□□□ 1.38
CCDC43-205ENST00000592333 GYG1P46976 350 aa23.69■■□□□ 1.38
CCDC43-205ENST00000592333 HDLBPQ00341 1268 aaKnown RBP23.69■■□□□ 1.38
CCDC43-205ENST00000592333 TRMT2AQ8IZ69 625 aaKnown RBP23.69■■□□□ 1.38
CCDC43-205ENST00000592333 TBC1D22AQ8WUA7 517 aa23.69■■□□□ 1.38
CCDC43-205ENST00000592333 RBM5P52756 815 aaKnown RBP eCLIP23.68■■□□□ 1.38
CCDC43-205ENST00000592333 MLLT1Q03111 559 aaPredicted RBP23.68■■□□□ 1.38
CCDC43-205ENST00000592333 SPRYD7Q5W111 196 aa23.68■■□□□ 1.38
CCDC43-205ENST00000592333 VPS37DQ86XT2 251 aa23.68■■□□□ 1.38
CCDC43-205ENST00000592333 VGLL2Q8N8G2 317 aa23.68■■□□□ 1.38
CCDC43-205ENST00000592333 TTF2Q9UNY4 1162 aaKnown RBP23.68■■□□□ 1.38
CCDC43-205ENST00000592333 METTL24Q5JXM2 366 aa23.67■■□□□ 1.38
CCDC43-205ENST00000592333 SLC10A4Q96EP9 437 aa23.67■■□□□ 1.38
CCDC43-205ENST00000592333 MRIQ9BWK5 157 aa23.67■■□□□ 1.38
CCDC43-205ENST00000592333 MANSC4A6NHS7 340 aaPredicted RBP23.66■■□□□ 1.38
CCDC43-205ENST00000592333 SPDYE2Q495Y8 402 aa23.66■■□□□ 1.38
CCDC43-205ENST00000592333 FBXO3Q9UK99 471 aa23.66■■□□□ 1.38
CCDC43-205ENST00000592333 HDAC5Q9UQL6 1122 aa23.66■■□□□ 1.38
CCDC43-205ENST00000592333 SUGT1Q9Y2Z0 365 aa23.66■■□□□ 1.38
CCDC43-205ENST00000592333 ARAP2Q8WZ64 1704 aa23.65■■□□□ 1.38
CCDC43-205ENST00000592333 IREB2P48200 963 aaKnown RBP23.65■■□□□ 1.38
CCDC43-205ENST00000592333 PRKG1Q13976 671 aa23.65■■□□□ 1.38
CCDC43-205ENST00000592333 RASA3Q14644 834 aa23.65■■□□□ 1.38
CCDC43-205ENST00000592333 LRRC24Q50LG9 513 aa23.65■■□□□ 1.38
CCDC43-205ENST00000592333 VEZTQ9HBM0 779 aa23.65■■□□□ 1.38
CCDC43-205ENST00000592333 PCDHAC2Q9Y5I4 1007 aa23.65■■□□□ 1.38
CCDC43-205ENST00000592333 CLRN2A0PK11 232 aa23.64■■□□□ 1.37
CCDC43-205ENST00000592333 DZIP1LQ8IYY4 767 aaKnown RBP23.64■■□□□ 1.37
CCDC43-205ENST00000592333 ZNF70Q9UC06 446 aaPredicted RBP23.64■■□□□ 1.37
CCDC43-205ENST00000592333 JAG2Q9Y219 1238 aa23.64■■□□□ 1.37
CCDC43-205ENST00000592333 SSC5DA1L4H1 1573 aa23.64■■□□□ 1.37
CCDC43-205ENST00000592333 CCER2I3L3R5 266 aa23.63■■□□□ 1.37
CCDC43-205ENST00000592333 GPR25O00155 361 aa23.63■■□□□ 1.37
CCDC43-205ENST00000592333 IFIT1P09914 478 aaKnown RBP23.63■■□□□ 1.37
CCDC43-205ENST00000592333 PUM3Q15397 648 aaKnown RBP23.63■■□□□ 1.37
CCDC43-205ENST00000592333 ANKRD13AQ8IZ07 590 aa23.63■■□□□ 1.37
CCDC43-205ENST00000592333 ZNF296Q8WUU4 475 aaPredicted RBP23.63■■□□□ 1.37
CCDC43-205ENST00000592333 SMC4Q9NTJ3 1288 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms