RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 FAM84BQ96KN1 310 aaPredicted RBP24.42■■□□□ 1.5
TPM4-208ENST00000588410 MEIS3Q99687 375 aa24.42■■□□□ 1.5
TPM4-208ENST00000588410 F8W031 263 aaPredicted RBP24.41■■□□□ 1.5
TPM4-208ENST00000588410 TRIM27P14373 513 aa24.41■■□□□ 1.5
TPM4-208ENST00000588410 DLGAP5Q15398 846 aa24.41■■□□□ 1.5
TPM4-208ENST00000588410 CERS5Q8N5B7 392 aa24.41■■□□□ 1.5
TPM4-208ENST00000588410 TDRD7Q8NHU6 1098 aaKnown RBP24.41■■□□□ 1.5
TPM4-208ENST00000588410 ZBED9Q6R2W3 1325 aa24.4■■□□□ 1.5
TPM4-208ENST00000588410 FRAT2O75474 233 aaPredicted RBP24.4■■□□□ 1.5
TPM4-208ENST00000588410 IFIT1P09914 478 aaKnown RBP24.4■■□□□ 1.5
TPM4-208ENST00000588410 PTPN12Q05209 780 aaKnown RBP24.4■■□□□ 1.5
TPM4-208ENST00000588410 PUM3Q15397 648 aaKnown RBP24.4■■□□□ 1.5
TPM4-208ENST00000588410 VGLL2Q8N8G2 317 aa24.4■■□□□ 1.5
TPM4-208ENST00000588410 ZKSCAN2Q63HK3 967 aa24.39■■□□□ 1.49
TPM4-208ENST00000588410 CLUAP1Q96AJ1 413 aa24.39■■□□□ 1.49
TPM4-208ENST00000588410 SIL1Q9H173 461 aa24.39■■□□□ 1.49
TPM4-208ENST00000588410 WBP1LQ9NX94 342 aa24.39■■□□□ 1.49
TPM4-208ENST00000588410 FAM205AQ6ZU69 1335 aa24.38■■□□□ 1.49
TPM4-208ENST00000588410 FBXO33Q7Z6M2 555 aa24.38■■□□□ 1.49
TPM4-208ENST00000588410 BEGAINQ9BUH8 593 aa24.38■■□□□ 1.49
TPM4-208ENST00000588410 FBXO3Q9UK99 471 aa24.38■■□□□ 1.49
TPM4-208ENST00000588410 SCAF8Q9UPN6 1271 aaKnown RBP24.38■■□□□ 1.49
TPM4-208ENST00000588410 MAP2K2P36507 400 aa24.37■■□□□ 1.49
TPM4-208ENST00000588410 MFSD14BQ5SR56 506 aa24.37■■□□□ 1.49
TPM4-208ENST00000588410 APOBEC3FQ8IUX4 373 aaKnown RBP24.37■■□□□ 1.49
TPM4-208ENST00000588410 PSME4Q14997 1843 aa24.36■■□□□ 1.49
TPM4-208ENST00000588410 FOXN1O15353 648 aa24.36■■□□□ 1.49
TPM4-208ENST00000588410 AOC2O75106 756 aa24.36■■□□□ 1.49
TPM4-208ENST00000588410 CIAO1O76071 339 aa24.36■■□□□ 1.49
TPM4-208ENST00000588410 SLC5A1P13866 664 aa24.36■■□□□ 1.49
TPM4-208ENST00000588410 CTCFP49711 727 aaPredicted RBP24.36■■□□□ 1.49
TPM4-208ENST00000588410 RBM5P52756 815 aaKnown RBP eCLIP24.36■■□□□ 1.498e-6■■■■□ 20.7
TPM4-208ENST00000588410 COL13A1Q5TAT6 717 aaPredicted RBP24.36■■□□□ 1.49
TPM4-208ENST00000588410 CEP126Q9P2H0 1117 aa24.36■■□□□ 1.49
TPM4-208ENST00000588410 IQSEC3Q9UPP2 1182 aaPredicted RBP24.36■■□□□ 1.49
TPM4-208ENST00000588410 MYO1BO43795 1136 aa24.35■■□□□ 1.49
TPM4-208ENST00000588410 CHAF1AQ13111 956 aaPredicted RBP24.35■■□□□ 1.49
TPM4-208ENST00000588410 CFAP100Q494V2 611 aa24.35■■□□□ 1.49
TPM4-208ENST00000588410 RGMBQ6NW40 437 aa24.35■■□□□ 1.49
TPM4-208ENST00000588410 ATG9AQ7Z3C6 839 aa24.35■■□□□ 1.49
TPM4-208ENST00000588410 MTMR14Q8NCE2 650 aa24.35■■□□□ 1.49
TPM4-208ENST00000588410 LPIN2Q92539 896 aa24.35■■□□□ 1.49
TPM4-208ENST00000588410 ZBED3Q96IU2 234 aaPredicted RBP24.35■■□□□ 1.49
TPM4-208ENST00000588410 TNNQ9UQP3 1299 aa24.35■■□□□ 1.49
TPM4-208ENST00000588410 FGFR2P21802 821 aa24.34■■□□□ 1.49
TPM4-208ENST00000588410 NF2P35240 595 aa24.34■■□□□ 1.49
TPM4-208ENST00000588410 BCAMP50895 628 aa24.34■■□□□ 1.49
TPM4-208ENST00000588410 FKBP1BP68106 108 aa24.34■■□□□ 1.49
TPM4-208ENST00000588410 TRPM7Q96QT4 1865 aa24.34■■□□□ 1.49
TPM4-208ENST00000588410 GNAI2P04899 355 aa24.33■■□□□ 1.49
TPM4-208ENST00000588410 IL15P40933 162 aaPredicted RBP24.33■■□□□ 1.49
TPM4-208ENST00000588410 ZNF157P51786 506 aaPredicted RBP24.33■■□□□ 1.49
TPM4-208ENST00000588410 NOGQ13253 232 aa24.33■■□□□ 1.49
TPM4-208ENST00000588410 PRAMEF18Q5VWM3 479 aa24.33■■□□□ 1.49
TPM4-208ENST00000588410 FTSJ3Q8IY81 847 aaKnown RBP24.33■■□□□ 1.49
TPM4-208ENST00000588410 TBC1D22AQ8WUA7 517 aa24.33■■□□□ 1.49
TPM4-208ENST00000588410 CCDC102AQ96A19 550 aa24.33■■□□□ 1.49
TPM4-208ENST00000588410 TTF2Q9UNY4 1162 aaKnown RBP24.33■■□□□ 1.49
TPM4-208ENST00000588410 PA2G4Q9UQ80 394 aaKnown RBP24.33■■□□□ 1.49
TPM4-208ENST00000588410 SRGAP3O43295 1099 aa24.32■■□□□ 1.48
TPM4-208ENST00000588410 TTLL12Q14166 644 aaPredicted RBP24.32■■□□□ 1.48
TPM4-208ENST00000588410 COPRSQ9NQ92 184 aa24.32■■□□□ 1.48
TPM4-208ENST00000588410 SPDYE2BA6NHP3 402 aa24.31■■□□□ 1.48
TPM4-208ENST00000588410 SPDYE6P0CI01 402 aa24.31■■□□□ 1.48
TPM4-208ENST00000588410 ATP2B3Q16720 1220 aa24.31■■□□□ 1.48
TPM4-208ENST00000588410 TMEM57Q8N5G2 664 aa24.31■■□□□ 1.48
TPM4-208ENST00000588410 A0A1B0GUL6 1792 aa24.3■■□□□ 1.48
TPM4-208ENST00000588410 SERPINA10Q9UK55 444 aa24.3■■□□□ 1.48
TPM4-208ENST00000588410 PCDHAC2Q9Y5I4 1007 aa24.3■■□□□ 1.48
TPM4-208ENST00000588410 CLRN2A0PK11 232 aa24.29■■□□□ 1.48
TPM4-208ENST00000588410 MTX1Q13505 466 aa24.29■■□□□ 1.48
TPM4-208ENST00000588410 TNS4Q8IZW8 715 aa24.29■■□□□ 1.48
TPM4-208ENST00000588410 PRMT6Q96LA8 375 aaPredicted RBP24.29■■□□□ 1.48
TPM4-208ENST00000588410 VEZTQ9HBM0 779 aa24.29■■□□□ 1.48
TPM4-208ENST00000588410 LBX1P52954 281 aa24.28■■□□□ 1.48
TPM4-208ENST00000588410 DZIP1LQ8IYY4 767 aaKnown RBP24.28■■□□□ 1.48
TPM4-208ENST00000588410 DEFB129Q9H1M3 183 aa24.28■■□□□ 1.48
TPM4-208ENST00000588410 PRDM10Q9NQV6 1147 aa24.28■■□□□ 1.48
TPM4-208ENST00000588410 GNL3LQ9NVN8 582 aaKnown RBP24.28■■□□□ 1.48
TPM4-208ENST00000588410 PPP2R3BQ9Y5P8 575 aa24.27■■□□□ 1.48
TPM4-208ENST00000588410 ZNF646O15015 1829 aaPredicted RBP24.26■■□□□ 1.47
TPM4-208ENST00000588410 FAM155AB1AL88 458 aaPredicted RBP24.26■■□□□ 1.47
TPM4-208ENST00000588410 UBE2Q2LH0YL09 131 aa24.26■■□□□ 1.47
TPM4-208ENST00000588410 HSPA8P11142 646 aaKnown RBP24.26■■□□□ 1.47
TPM4-208ENST00000588410 CRKP46108 304 aa24.26■■□□□ 1.47
TPM4-208ENST00000588410 MOB2Q70IA6 237 aa24.26■■□□□ 1.47
TPM4-208ENST00000588410 ARMC9Q7Z3E5 817 aa24.26■■□□□ 1.47
TPM4-208ENST00000588410 ITPRIPQ8IWB1 547 aa24.26■■□□□ 1.47
TPM4-208ENST00000588410 PCNTO95613 3336 aa24.25■■□□□ 1.47
TPM4-208ENST00000588410 CA12O43570 354 aa24.25■■□□□ 1.47
TPM4-208ENST00000588410 SLC10A3P09131 477 aa24.25■■□□□ 1.47
TPM4-208ENST00000588410 WDR66Q8TBY9 1149 aa24.25■■□□□ 1.47
TPM4-208ENST00000588410 HDLBPQ00341 1268 aaKnown RBP24.24■■□□□ 1.47
TPM4-208ENST00000588410 KIF23Q02241 960 aaPredicted RBP24.24■■□□□ 1.47
TPM4-208ENST00000588410 TNFAIP1Q13829 316 aa24.24■■□□□ 1.47
TPM4-208ENST00000588410 PRKG1Q13976 671 aa24.24■■□□□ 1.47
TPM4-208ENST00000588410 GRIK5Q16478 980 aa24.24■■□□□ 1.47
TPM4-208ENST00000588410 TEKT1Q969V4 418 aa24.24■■□□□ 1.47
TPM4-208ENST00000588410 ZIC5Q96T25 663 aa24.24■■□□□ 1.47
TPM4-208ENST00000588410 ZNF70Q9UC06 446 aaPredicted RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms