RNA–Protein interactions for RNA: ENST00000578318.1

ITGB4-204, Transcript of integrin subunit beta 4, humanhuman

TSL 2

Gene ITGB4, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-204ENST00000578318 CNNM1Q9NRU3 951 aa18.32■□□□□ 0.52
ITGB4-204ENST00000578318 FKBP1AP62942 108 aaKnown RBP18.31■□□□□ 0.52
ITGB4-204ENST00000578318 CERS5Q8N5B7 392 aa18.31■□□□□ 0.52
ITGB4-204ENST00000578318 ZNF594Q96JF6 807 aaPredicted RBP18.31■□□□□ 0.52
ITGB4-204ENST00000578318 SRCIN1Q9C0H9 1055 aa18.31■□□□□ 0.52
ITGB4-204ENST00000578318 SLC4A10Q6U841 1118 aa18.3■□□□□ 0.52
ITGB4-204ENST00000578318 PLIN1O60240 522 aa18.29■□□□□ 0.52
ITGB4-204ENST00000578318 TM4SF4P48230 202 aa18.29■□□□□ 0.52
ITGB4-204ENST00000578318 PTPN12Q05209 780 aaKnown RBP18.29■□□□□ 0.52
ITGB4-204ENST00000578318 CTU1Q7Z7A3 348 aaKnown RBP18.29■□□□□ 0.52
ITGB4-204ENST00000578318 DEFB129Q9H1M3 183 aa18.29■□□□□ 0.52
ITGB4-204ENST00000578318 PPP2R3BQ9Y5P8 575 aa18.29■□□□□ 0.52
ITGB4-204ENST00000578318 F8W031 263 aaPredicted RBP18.28■□□□□ 0.52
ITGB4-204ENST00000578318 MYO1BO43795 1136 aa18.28■□□□□ 0.52
ITGB4-204ENST00000578318 SREBF2Q12772 1141 aa18.28■□□□□ 0.52
ITGB4-204ENST00000578318 PRKG1Q13976 671 aa18.28■□□□□ 0.52
ITGB4-204ENST00000578318 ANGEL1Q9UNK9 670 aaKnown RBP18.28■□□□□ 0.52
ITGB4-204ENST00000578318 ZNF521Q96K83 1311 aa18.27■□□□□ 0.52
ITGB4-204ENST00000578318 ARAP2Q8WZ64 1704 aa18.27■□□□□ 0.52
ITGB4-204ENST00000578318 MKRN3Q13064 507 aaKnown RBP18.27■□□□□ 0.52
ITGB4-204ENST00000578318 UBE4AQ14139 1066 aa18.27■□□□□ 0.52
ITGB4-204ENST00000578318 CFAP100Q494V2 611 aa18.27■□□□□ 0.52
ITGB4-204ENST00000578318 LDLRAD1Q5T700 205 aa18.27■□□□□ 0.52
ITGB4-204ENST00000578318 SUCLG2Q96I99 432 aa18.27■□□□□ 0.52
ITGB4-204ENST00000578318 FAM205AQ6ZU69 1335 aa18.26■□□□□ 0.51
ITGB4-204ENST00000578318 SPDYE2BA6NHP3 402 aa18.26■□□□□ 0.51
ITGB4-204ENST00000578318 SPDYE6P0CI01 402 aa18.26■□□□□ 0.51
ITGB4-204ENST00000578318 JAG2Q9Y219 1238 aa18.26■□□□□ 0.51
ITGB4-204ENST00000578318 PCDHAC2Q9Y5I4 1007 aa18.26■□□□□ 0.51
ITGB4-204ENST00000578318 UTYO14607 1347 aa18.25■□□□□ 0.51
ITGB4-204ENST00000578318 PPP1R12BO60237 982 aaPredicted RBP18.25■□□□□ 0.51
ITGB4-204ENST00000578318 TBC1D8O95759 1140 aa18.25■□□□□ 0.51
ITGB4-204ENST00000578318 NBPF7P0C2Y1 421 aaPredicted RBP18.25■□□□□ 0.51
ITGB4-204ENST00000578318 MAP3K11Q16584 847 aa18.25■□□□□ 0.51
ITGB4-204ENST00000578318 NOM1Q5C9Z4 860 aaKnown RBP18.25■□□□□ 0.51
ITGB4-204ENST00000578318 SPRYD7Q5W111 196 aa18.25■□□□□ 0.51
ITGB4-204ENST00000578318 TDRD7Q8NHU6 1098 aaKnown RBP18.25■□□□□ 0.51
ITGB4-204ENST00000578318 ZNF296Q8WUU4 475 aaPredicted RBP18.25■□□□□ 0.51
ITGB4-204ENST00000578318 KAZALD1Q96I82 304 aa18.25■□□□□ 0.51
ITGB4-204ENST00000578318 PRMT6Q96LA8 375 aaPredicted RBP18.25■□□□□ 0.51
ITGB4-204ENST00000578318 SSC5DA1L4H1 1573 aa18.25■□□□□ 0.51
ITGB4-204ENST00000578318 MROH5Q6ZUA9 1318 aa18.24■□□□□ 0.51
ITGB4-204ENST00000578318 CLRN2A0PK11 232 aa18.24■□□□□ 0.51
ITGB4-204ENST00000578318 HIBADHP31937 336 aaKnown RBP18.24■□□□□ 0.51
ITGB4-204ENST00000578318 RBM5P52756 815 aaKnown RBP eCLIP18.24■□□□□ 0.51
ITGB4-204ENST00000578318 SUPT20HL1Q3ZLR7 823 aa18.24■□□□□ 0.51
ITGB4-204ENST00000578318 VEZTQ9HBM0 779 aa18.24■□□□□ 0.51
ITGB4-204ENST00000578318 LAMB1P07942 1786 aa18.24■□□□□ 0.51
ITGB4-204ENST00000578318 GYG1P46976 350 aa18.23■□□□□ 0.51
ITGB4-204ENST00000578318 PKN2Q16513 984 aaKnown RBP18.23■□□□□ 0.51
ITGB4-204ENST00000578318 RABL6Q3YEC7 729 aaPredicted RBP18.23■□□□□ 0.51
ITGB4-204ENST00000578318 MFSD14BQ5SR56 506 aa18.23■□□□□ 0.51
ITGB4-204ENST00000578318 MRPL50Q8N5N7 158 aaKnown RBP18.23■□□□□ 0.51
ITGB4-204ENST00000578318 FAM84BQ96KN1 310 aaPredicted RBP18.23■□□□□ 0.51
ITGB4-204ENST00000578318 CFHR5Q9BXR6 569 aa18.23■□□□□ 0.51
ITGB4-204ENST00000578318 PUS3Q9BZE2 481 aaKnown RBP18.23■□□□□ 0.51
ITGB4-204ENST00000578318 FZD1Q9UP38 647 aa18.23■□□□□ 0.51
ITGB4-204ENST00000578318 RIPOR2Q9Y4F9 1068 aa18.23■□□□□ 0.51
ITGB4-204ENST00000578318 PTPRCP08575 1304 aa18.23■□□□□ 0.51
ITGB4-204ENST00000578318 UNCXA6NJT0 531 aa18.22■□□□□ 0.51
ITGB4-204ENST00000578318 GPR25O00155 361 aa18.22■□□□□ 0.51
ITGB4-204ENST00000578318 SLC10A4Q96EP9 437 aa18.22■□□□□ 0.51
ITGB4-204ENST00000578318 BICC1Q9H694 974 aaKnown RBP18.22■□□□□ 0.51
ITGB4-204ENST00000578318 SERPINA10Q9UK55 444 aa18.22■□□□□ 0.51
ITGB4-204ENST00000578318 TTF2Q9UNY4 1162 aaKnown RBP18.22■□□□□ 0.51
ITGB4-204ENST00000578318 AOX1Q06278 1338 aa18.22■□□□□ 0.51
ITGB4-204ENST00000578318 MANSC4A6NHS7 340 aaPredicted RBP18.21■□□□□ 0.51
ITGB4-204ENST00000578318 E9PSI1 815 aa18.21■□□□□ 0.51
ITGB4-204ENST00000578318 ALDH1A1P00352 501 aa18.21■□□□□ 0.51
ITGB4-204ENST00000578318 ZBTB48P10074 688 aaPredicted RBP18.21■□□□□ 0.51
ITGB4-204ENST00000578318 TNFAIP1Q13829 316 aa18.21■□□□□ 0.51
ITGB4-204ENST00000578318 SPDYE2Q495Y8 402 aa18.21■□□□□ 0.51
ITGB4-204ENST00000578318 IREB2P48200 963 aaKnown RBP18.2■□□□□ 0.5
ITGB4-204ENST00000578318 SOX10P56693 466 aa18.2■□□□□ 0.5
ITGB4-204ENST00000578318 INHBEP58166 350 aa18.2■□□□□ 0.5
ITGB4-204ENST00000578318 RASA3Q14644 834 aa18.2■□□□□ 0.5
ITGB4-204ENST00000578318 NBPF12Q5TAG4 269 aaPredicted RBP18.2■□□□□ 0.5
ITGB4-204ENST00000578318 VPS37DQ86XT2 251 aa18.2■□□□□ 0.5
ITGB4-204ENST00000578318 ANKRD44Q8N8A2 993 aa18.2■□□□□ 0.5
ITGB4-204ENST00000578318 WNK4Q96J92 1243 aa18.2■□□□□ 0.5
ITGB4-204ENST00000578318 HPS5Q9UPZ3 1129 aa18.2■□□□□ 0.5
ITGB4-204ENST00000578318 METTL24Q5JXM2 366 aa18.19■□□□□ 0.5
ITGB4-204ENST00000578318 FBXO33Q7Z6M2 555 aa18.19■□□□□ 0.5
ITGB4-204ENST00000578318 CLMNQ96JQ2 1002 aa18.19■□□□□ 0.5
ITGB4-204ENST00000578318 ZNF70Q9UC06 446 aaPredicted RBP18.19■□□□□ 0.5
ITGB4-204ENST00000578318 OTOFQ9HC10 1997 aa18.19■□□□□ 0.5
ITGB4-204ENST00000578318 FKTNO75072 461 aa18.18■□□□□ 0.5
ITGB4-204ENST00000578318 LRRC24Q50LG9 513 aa18.18■□□□□ 0.5
ITGB4-204ENST00000578318 SSH1Q8WYL5 1049 aa18.18■□□□□ 0.5
ITGB4-204ENST00000578318 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.18■□□□□ 0.5
ITGB4-204ENST00000578318 USP2O75604 605 aaPredicted RBP18.17■□□□□ 0.5
ITGB4-204ENST00000578318 CRKP46108 304 aa18.17■□□□□ 0.5
ITGB4-204ENST00000578318 CAVIN4Q5BKX8 364 aa18.17■□□□□ 0.5
ITGB4-204ENST00000578318 IFNL1Q8IU54 200 aa18.17■□□□□ 0.5
ITGB4-204ENST00000578318 DZIP1LQ8IYY4 767 aaKnown RBP18.17■□□□□ 0.5
ITGB4-204ENST00000578318 ANKRD13AQ8IZ07 590 aa18.17■□□□□ 0.5
ITGB4-204ENST00000578318 VGLL2Q8N8G2 317 aa18.17■□□□□ 0.5
ITGB4-204ENST00000578318 TBC1D22AQ8WUA7 517 aa18.17■□□□□ 0.5
ITGB4-204ENST00000578318 TDRD3Q9H7E2 651 aaKnown RBP18.17■□□□□ 0.5
ITGB4-204ENST00000578318 PDE4DIPQ5VU43 2346 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms