RNA–Protein interactions for RNA: ENST00000571545.1

CIITA-207, Transcript of class II major histocompatibility complex transactivator, humanhuman

TSL 3

Gene CIITA, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-207ENST00000571545 TAF5LO75529 589 aa12.24□□□□□ -0.45
CIITA-207ENST00000571545 SLC10A3P09131 477 aa12.24□□□□□ -0.45
CIITA-207ENST00000571545 KLRK1P26718 216 aa12.24□□□□□ -0.45
CIITA-207ENST00000571545 RABL6Q3YEC7 729 aaPredicted RBP12.24□□□□□ -0.45
CIITA-207ENST00000571545 KIAA0825Q8IV33 1275 aa12.24□□□□□ -0.45
CIITA-207ENST00000571545 SSH1Q8WYL5 1049 aa12.24□□□□□ -0.45
CIITA-207ENST00000571545 SUCLG2Q96I99 432 aa12.24□□□□□ -0.45
CIITA-207ENST00000571545 SMC4Q9NTJ3 1288 aa12.24□□□□□ -0.45
CIITA-207ENST00000571545 IRS2Q9Y4H2 1338 aa12.24□□□□□ -0.45
CIITA-207ENST00000571545 PPP2R3BQ9Y5P8 575 aa12.24□□□□□ -0.45
CIITA-207ENST00000571545 ASTN2O75129 1339 aaPredicted RBP12.23□□□□□ -0.45
CIITA-207ENST00000571545 NBPF7P0C2Y1 421 aaPredicted RBP12.23□□□□□ -0.45
CIITA-207ENST00000571545 DLGAP5Q15398 846 aa12.23□□□□□ -0.45
CIITA-207ENST00000571545 NBPF9Q3BBW0 867 aa12.23□□□□□ -0.45
CIITA-207ENST00000571545 EPHA10Q5JZY3 1008 aa12.23□□□□□ -0.45
CIITA-207ENST00000571545 MTMR14Q8NCE2 650 aa12.23□□□□□ -0.45
CIITA-207ENST00000571545 HELBQ8NG08 1087 aaPredicted RBP12.23□□□□□ -0.45
CIITA-207ENST00000571545 BICC1Q9H694 974 aaKnown RBP12.23□□□□□ -0.45
CIITA-207ENST00000571545 KIF16BQ96L93 1317 aa12.22□□□□□ -0.45
CIITA-207ENST00000571545 WTIPA6NIX2 430 aaPredicted RBP12.22□□□□□ -0.45
CIITA-207ENST00000571545 PLIN1O60240 522 aa12.22□□□□□ -0.45
CIITA-207ENST00000571545 SASH1O94885 1247 aa12.22□□□□□ -0.45
CIITA-207ENST00000571545 CAVIN4Q5BKX8 364 aa12.22□□□□□ -0.45
CIITA-207ENST00000571545 VPS37DQ86XT2 251 aa12.22□□□□□ -0.45
CIITA-207ENST00000571545 API5Q9BZZ5 524 aaKnown RBP12.22□□□□□ -0.45
CIITA-207ENST00000571545 FAM205AQ6ZU69 1335 aa12.21□□□□□ -0.45
CIITA-207ENST00000571545 FAM155AB1AL88 458 aaPredicted RBP12.21□□□□□ -0.45
CIITA-207ENST00000571545 HIBADHP31937 336 aaKnown RBP12.21□□□□□ -0.45
CIITA-207ENST00000571545 TNFAIP1Q13829 316 aa12.21□□□□□ -0.45
CIITA-207ENST00000571545 TTLL12Q14166 644 aaPredicted RBP12.21□□□□□ -0.45
CIITA-207ENST00000571545 METTL24Q5JXM2 366 aa12.21□□□□□ -0.45
CIITA-207ENST00000571545 ARMC9Q7Z3E5 817 aa12.21□□□□□ -0.45
CIITA-207ENST00000571545 ZNF594Q96JF6 807 aaPredicted RBP12.21□□□□□ -0.45
CIITA-207ENST00000571545 MXD3Q9BW11 206 aa12.21□□□□□ -0.45
CIITA-207ENST00000571545 UNCXA6NJT0 531 aa12.2□□□□□ -0.46
CIITA-207ENST00000571545 MFSD14BQ5SR56 506 aa12.2□□□□□ -0.46
CIITA-207ENST00000571545 RASAL3Q86YV0 1011 aa12.2□□□□□ -0.46
CIITA-207ENST00000571545 TRMT2AQ8IZ69 625 aaKnown RBP12.2□□□□□ -0.46
CIITA-207ENST00000571545 TBC1D22AQ8WUA7 517 aa12.2□□□□□ -0.46
CIITA-207ENST00000571545 KAZALD1Q96I82 304 aa12.2□□□□□ -0.46
CIITA-207ENST00000571545 ZBED3Q96IU2 234 aaPredicted RBP12.2□□□□□ -0.46
CIITA-207ENST00000571545 SERPINA10Q9UK55 444 aa12.2□□□□□ -0.46
CIITA-207ENST00000571545 FBXO3Q9UK99 471 aa12.2□□□□□ -0.46
CIITA-207ENST00000571545 RIPOR2Q9Y4F9 1068 aa12.2□□□□□ -0.46
CIITA-207ENST00000571545 MYH13Q9UKX3 1938 aa12.19□□□□□ -0.46
CIITA-207ENST00000571545 MAST3O60307 1309 aa12.19□□□□□ -0.46
CIITA-207ENST00000571545 SPDYE2BA6NHP3 402 aa12.19□□□□□ -0.46
CIITA-207ENST00000571545 PPP1R12BO60237 982 aaPredicted RBP12.19□□□□□ -0.46
CIITA-207ENST00000571545 FRAT2O75474 233 aaPredicted RBP12.19□□□□□ -0.46
CIITA-207ENST00000571545 PDE8BO95263 885 aa12.19□□□□□ -0.46
CIITA-207ENST00000571545 UBTFL1P0CB47 393 aaPredicted RBP12.19□□□□□ -0.46
CIITA-207ENST00000571545 SPDYE6P0CI01 402 aa12.19□□□□□ -0.46
CIITA-207ENST00000571545 ATXN8OSP0DMR3 200 aa12.19□□□□□ -0.46
CIITA-207ENST00000571545 KIF23Q02241 960 aaPredicted RBP12.19□□□□□ -0.46
CIITA-207ENST00000571545 SREBF2Q12772 1141 aa12.19□□□□□ -0.46
CIITA-207ENST00000571545 DLK2Q6UY11 383 aa12.19□□□□□ -0.46
CIITA-207ENST00000571545 ANKRD44Q8N8A2 993 aa12.19□□□□□ -0.46
CIITA-207ENST00000571545 TDRD7Q8NHU6 1098 aaKnown RBP12.19□□□□□ -0.46
CIITA-207ENST00000571545 USP44Q9H0E7 712 aa12.19□□□□□ -0.46
CIITA-207ENST00000571545 SNAP23O00161 211 aa12.18□□□□□ -0.46
CIITA-207ENST00000571545 IFIT1P09914 478 aaKnown RBP12.18□□□□□ -0.46
CIITA-207ENST00000571545 RBM5P52756 815 aaKnown RBP eCLIP12.18□□□□□ -0.46
CIITA-207ENST00000571545 PUM3Q15397 648 aaKnown RBP12.18□□□□□ -0.46
CIITA-207ENST00000571545 SUPT20HL1Q3ZLR7 823 aa12.18□□□□□ -0.46
CIITA-207ENST00000571545 CFAP100Q494V2 611 aa12.18□□□□□ -0.46
CIITA-207ENST00000571545 CERS5Q8N5B7 392 aa12.18□□□□□ -0.46
CIITA-207ENST00000571545 DEFB129Q9H1M3 183 aa12.18□□□□□ -0.46
CIITA-207ENST00000571545 F8W031 263 aaPredicted RBP12.17□□□□□ -0.46
CIITA-207ENST00000571545 GYG1P46976 350 aa12.17□□□□□ -0.46
CIITA-207ENST00000571545 ARHGAP45Q92619 1136 aa12.17□□□□□ -0.46
CIITA-207ENST00000571545 CDCA7LQ96GN5 454 aa12.17□□□□□ -0.46
CIITA-207ENST00000571545 ABHD8Q96I13 439 aa12.17□□□□□ -0.46
CIITA-207ENST00000571545 FAM84BQ96KN1 310 aaPredicted RBP12.17□□□□□ -0.46
CIITA-207ENST00000571545 PUS3Q9BZE2 481 aaKnown RBP12.17□□□□□ -0.46
CIITA-207ENST00000571545 TSKSQ9UJT2 592 aa12.17□□□□□ -0.46
CIITA-207ENST00000571545 TTF2Q9UNY4 1162 aaKnown RBP12.17□□□□□ -0.46
CIITA-207ENST00000571545 SUGT1Q9Y2Z0 365 aa12.17□□□□□ -0.46
CIITA-207ENST00000571545 CASP8AP2Q9UKL3 1982 aa12.17□□□□□ -0.46
CIITA-207ENST00000571545 LAMB1P07942 1786 aa12.16□□□□□ -0.46
CIITA-207ENST00000571545 IPO8O15397 1037 aaKnown RBP12.16□□□□□ -0.46
CIITA-207ENST00000571545 SLC5A1P13866 664 aa12.16□□□□□ -0.46
CIITA-207ENST00000571545 TNNI2P48788 182 aa12.16□□□□□ -0.46
CIITA-207ENST00000571545 HDLBPQ00341 1268 aaKnown RBP12.16□□□□□ -0.46
CIITA-207ENST00000571545 MAP3K11Q16584 847 aa12.16□□□□□ -0.46
CIITA-207ENST00000571545 VGLL2Q8N8G2 317 aa12.16□□□□□ -0.46
CIITA-207ENST00000571545 VEZTQ9HBM0 779 aa12.16□□□□□ -0.46
CIITA-207ENST00000571545 NOB1Q9ULX3 412 aaKnown RBP12.16□□□□□ -0.46
CIITA-207ENST00000571545 UBE2Q2LH0YL09 131 aa12.15□□□□□ -0.46
CIITA-207ENST00000571545 EYA2O00167 538 aa12.15□□□□□ -0.46
CIITA-207ENST00000571545 TRPA1O75762 1119 aa12.15□□□□□ -0.46
CIITA-207ENST00000571545 CIAO1O76071 339 aa12.15□□□□□ -0.46
CIITA-207ENST00000571545 ALDH1A1P00352 501 aa12.15□□□□□ -0.46
CIITA-207ENST00000571545 GNAI3P08754 354 aa12.15□□□□□ -0.46
CIITA-207ENST00000571545 ZBTB48P10074 688 aaPredicted RBP12.15□□□□□ -0.46
CIITA-207ENST00000571545 IREB2P48200 963 aaKnown RBP12.15□□□□□ -0.46
CIITA-207ENST00000571545 LRRC24Q50LG9 513 aa12.15□□□□□ -0.46
CIITA-207ENST00000571545 PRAMEF18Q5VWM3 479 aa12.15□□□□□ -0.46
CIITA-207ENST00000571545 FBXO33Q7Z6M2 555 aa12.15□□□□□ -0.46
CIITA-207ENST00000571545 LPIN2Q92539 896 aa12.15□□□□□ -0.46
CIITA-207ENST00000571545 HOOK2Q96ED9 719 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms