RNA–Protein interactions for RNA: ENST00000569337.1

UBR1-210, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 5

Gene UBR1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-210ENST00000569337 HDAC9Q9UKV0 1011 aa11.66□□□□□ -0.54
UBR1-210ENST00000569337 CNTNAP1P78357 1384 aa11.66□□□□□ -0.54
UBR1-210ENST00000569337 RASSF10A6NK89 507 aa11.65□□□□□ -0.54
UBR1-210ENST00000569337 EYA2O00167 538 aa11.65□□□□□ -0.54
UBR1-210ENST00000569337 GYG1P46976 350 aa11.65□□□□□ -0.54
UBR1-210ENST00000569337 RFX5P48382 616 aaPredicted RBP11.65□□□□□ -0.54
UBR1-210ENST00000569337 VEGFBP49765 207 aa11.65□□□□□ -0.54
UBR1-210ENST00000569337 ATP8B2P98198 1209 aa11.65□□□□□ -0.54
UBR1-210ENST00000569337 PTPN12Q05209 780 aaKnown RBP11.65□□□□□ -0.54
UBR1-210ENST00000569337 CAVIN4Q5BKX8 364 aa11.65□□□□□ -0.54
UBR1-210ENST00000569337 ANGEL2Q5VTE6 544 aaKnown RBP11.65□□□□□ -0.54
UBR1-210ENST00000569337 VPS37DQ86XT2 251 aa11.65□□□□□ -0.54
UBR1-210ENST00000569337 KIAA0825Q8IV33 1275 aa11.65□□□□□ -0.54
UBR1-210ENST00000569337 FAM84BQ96KN1 310 aaPredicted RBP11.65□□□□□ -0.54
UBR1-210ENST00000569337 CHMP4BQ9H444 224 aaKnown RBP11.65□□□□□ -0.54
UBR1-210ENST00000569337 ASTN2O75129 1339 aaPredicted RBP11.64□□□□□ -0.55
UBR1-210ENST00000569337 FRAT2O75474 233 aaPredicted RBP11.64□□□□□ -0.55
UBR1-210ENST00000569337 SASH1O94885 1247 aa11.64□□□□□ -0.55
UBR1-210ENST00000569337 MTX1Q13505 466 aa11.64□□□□□ -0.55
UBR1-210ENST00000569337 AAMPQ13685 434 aa11.64□□□□□ -0.55
UBR1-210ENST00000569337 PAXIP1Q6ZW49 1069 aaPredicted RBP11.64□□□□□ -0.55
UBR1-210ENST00000569337 SIL1Q9H173 461 aa11.64□□□□□ -0.55
UBR1-210ENST00000569337 FBXO3Q9UK99 471 aa11.64□□□□□ -0.55
UBR1-210ENST00000569337 ADM5C9JUS6 153 aa11.63□□□□□ -0.55
UBR1-210ENST00000569337 WNT10BO00744 389 aa11.63□□□□□ -0.55
UBR1-210ENST00000569337 IGHDP01880 384 aa11.63□□□□□ -0.55
UBR1-210ENST00000569337 IFIT1P09914 478 aaKnown RBP11.63□□□□□ -0.55
UBR1-210ENST00000569337 FKBP1AP62942 108 aaKnown RBP11.63□□□□□ -0.55
UBR1-210ENST00000569337 POLA2Q14181 598 aa11.63□□□□□ -0.55
UBR1-210ENST00000569337 PUM3Q15397 648 aaKnown RBP11.63□□□□□ -0.55
UBR1-210ENST00000569337 NBPF9Q3BBW0 867 aa11.63□□□□□ -0.55
UBR1-210ENST00000569337 DLK2Q6UY11 383 aa11.63□□□□□ -0.55
UBR1-210ENST00000569337 RPAP2Q8IXW5 612 aaPredicted RBP11.63□□□□□ -0.55
UBR1-210ENST00000569337 VGLL2Q8N8G2 317 aa11.63□□□□□ -0.55
UBR1-210ENST00000569337 TDRD7Q8NHU6 1098 aaKnown RBP11.63□□□□□ -0.55
UBR1-210ENST00000569337 SSH3Q8TE77 659 aa11.63□□□□□ -0.55
UBR1-210ENST00000569337 CEP126Q9P2H0 1117 aa11.63□□□□□ -0.55
UBR1-210ENST00000569337 JAG2Q9Y219 1238 aa11.63□□□□□ -0.55
UBR1-210ENST00000569337 TLL2Q9Y6L7 1015 aa11.63□□□□□ -0.55
UBR1-210ENST00000569337 SCN9AQ15858 1988 aa11.62□□□□□ -0.55
UBR1-210ENST00000569337 F8W031 263 aaPredicted RBP11.62□□□□□ -0.55
UBR1-210ENST00000569337 SRGAP3O43295 1099 aa11.62□□□□□ -0.55
UBR1-210ENST00000569337 CIAO1O76071 339 aa11.62□□□□□ -0.55
UBR1-210ENST00000569337 ECE1P42892 770 aa11.62□□□□□ -0.55
UBR1-210ENST00000569337 GRM1Q13255 1194 aa11.62□□□□□ -0.55
UBR1-210ENST00000569337 DLGAP5Q15398 846 aa11.62□□□□□ -0.55
UBR1-210ENST00000569337 ATG9AQ7Z3C6 839 aa11.62□□□□□ -0.55
UBR1-210ENST00000569337 FBXO33Q7Z6M2 555 aa11.62□□□□□ -0.55
UBR1-210ENST00000569337 SAPCD2Q86UD0 394 aa11.62□□□□□ -0.55
UBR1-210ENST00000569337 CERS5Q8N5B7 392 aa11.62□□□□□ -0.55
UBR1-210ENST00000569337 C2orf69Q8N8R5 385 aa11.62□□□□□ -0.55
UBR1-210ENST00000569337 PA2G4Q9UQ80 394 aaKnown RBP11.62□□□□□ -0.55
UBR1-210ENST00000569337 FAM205AQ6ZU69 1335 aa11.61□□□□□ -0.55
UBR1-210ENST00000569337 PITPNM2Q9BZ72 1349 aa11.61□□□□□ -0.55
UBR1-210ENST00000569337 WDR33Q9C0J8 1336 aaKnown RBP11.61□□□□□ -0.55
UBR1-210ENST00000569337 HSPA1AP0DMV8 641 aaKnown RBP11.61□□□□□ -0.55
UBR1-210ENST00000569337 HSPA1BP0DMV9 641 aaKnown RBP11.61□□□□□ -0.55
UBR1-210ENST00000569337 SLC5A1P13866 664 aa11.61□□□□□ -0.55
UBR1-210ENST00000569337 FGFR2P21802 821 aa11.61□□□□□ -0.55
UBR1-210ENST00000569337 IL15P40933 162 aaPredicted RBP11.61□□□□□ -0.55
UBR1-210ENST00000569337 BCAMP50895 628 aa11.61□□□□□ -0.55
UBR1-210ENST00000569337 MFSD14BQ5SR56 506 aa11.61□□□□□ -0.55
UBR1-210ENST00000569337 ERICH6BQ5W0A0 696 aa11.61□□□□□ -0.55
UBR1-210ENST00000569337 CYP4F22Q6NT55 531 aa11.61□□□□□ -0.55
UBR1-210ENST00000569337 LPIN2Q92539 896 aa11.61□□□□□ -0.55
UBR1-210ENST00000569337 CAPNS2Q96L46 248 aa11.61□□□□□ -0.55
UBR1-210ENST00000569337 GBA2Q9HCG7 927 aaPredicted RBP11.61□□□□□ -0.55
UBR1-210ENST00000569337 COPRSQ9NQ92 184 aa11.61□□□□□ -0.55
UBR1-210ENST00000569337 IQSEC3Q9UPP2 1182 aaPredicted RBP11.61□□□□□ -0.55
UBR1-210ENST00000569337 GTF3C3Q9Y5Q9 886 aa11.61□□□□□ -0.55
UBR1-210ENST00000569337 A0A1B0GUL6 1792 aa11.61□□□□□ -0.55
UBR1-210ENST00000569337 RBM5P52756 815 aaKnown RBP eCLIP11.6□□□□□ -0.55
UBR1-210ENST00000569337 HUNKP57058 714 aa11.6□□□□□ -0.55
UBR1-210ENST00000569337 CHAF1AQ13111 956 aaPredicted RBP11.6□□□□□ -0.55
UBR1-210ENST00000569337 HDAC1Q13547 482 aaPredicted RBP11.6□□□□□ -0.55
UBR1-210ENST00000569337 CDCA5Q96FF9 252 aa11.6□□□□□ -0.55
UBR1-210ENST00000569337 HHIPL1Q96JK4 782 aa11.6□□□□□ -0.55
UBR1-210ENST00000569337 SCAF8Q9UPN6 1271 aaKnown RBP11.6□□□□□ -0.55
UBR1-210ENST00000569337 MYO1BO43795 1136 aa11.59□□□□□ -0.55
UBR1-210ENST00000569337 MAP2K1Q02750 393 aaPredicted RBP11.59□□□□□ -0.55
UBR1-210ENST00000569337 ATP2B3Q16720 1220 aa11.59□□□□□ -0.55
UBR1-210ENST00000569337 CFAP100Q494V2 611 aa11.59□□□□□ -0.55
UBR1-210ENST00000569337 B4GALNT3Q6L9W6 998 aa11.59□□□□□ -0.55
UBR1-210ENST00000569337 APOBEC3FQ8IUX4 373 aaKnown RBP11.59□□□□□ -0.55
UBR1-210ENST00000569337 MTMR14Q8NCE2 650 aa11.59□□□□□ -0.55
UBR1-210ENST00000569337 TBC1D22AQ8WUA7 517 aa11.59□□□□□ -0.55
UBR1-210ENST00000569337 ZBED3Q96IU2 234 aaPredicted RBP11.59□□□□□ -0.55
UBR1-210ENST00000569337 PPP4R2Q9NY27 417 aa11.59□□□□□ -0.55
UBR1-210ENST00000569337 TTF2Q9UNY4 1162 aaKnown RBP11.59□□□□□ -0.55
UBR1-210ENST00000569337 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.59□□□□□ -0.55
UBR1-210ENST00000569337 PRAMEF18Q5VWM3 479 aa11.58□□□□□ -0.56
UBR1-210ENST00000569337 AIDAQ96BJ3 306 aa11.58□□□□□ -0.56
UBR1-210ENST00000569337 GNL3LQ9NVN8 582 aaKnown RBP11.58□□□□□ -0.56
UBR1-210ENST00000569337 NOP58Q9Y2X3 529 aaKnown RBP11.58□□□□□ -0.56
UBR1-210ENST00000569337 SPDYE2BA6NHP3 402 aa11.57□□□□□ -0.56
UBR1-210ENST00000569337 HMMRO75330 724 aa11.57□□□□□ -0.56
UBR1-210ENST00000569337 SPDYE6P0CI01 402 aa11.57□□□□□ -0.56
UBR1-210ENST00000569337 NF2P35240 595 aa11.57□□□□□ -0.56
UBR1-210ENST00000569337 MAP2K2P36507 400 aa11.57□□□□□ -0.56
UBR1-210ENST00000569337 FKBP1BP68106 108 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms