RNA–Protein interactions for RNA: ENST00000569245.5

COMMD4-225, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-225ENST00000569245 SASH1O94885 1247 aa18■□□□□ 0.47
COMMD4-225ENST00000569245 MS4A1P11836 297 aa18■□□□□ 0.47
COMMD4-225ENST00000569245 PUM3Q15397 648 aaKnown RBP18■□□□□ 0.47
COMMD4-225ENST00000569245 TMEM57Q8N5G2 664 aa18■□□□□ 0.47
COMMD4-225ENST00000569245 GNAI2P04899 355 aa17.99■□□□□ 0.47
COMMD4-225ENST00000569245 IFIT1P09914 478 aaKnown RBP17.99■□□□□ 0.47
COMMD4-225ENST00000569245 NBPF9Q3BBW0 867 aa17.99■□□□□ 0.47
COMMD4-225ENST00000569245 CERS5Q8N5B7 392 aa17.99■□□□□ 0.47
COMMD4-225ENST00000569245 VGLL2Q8N8G2 317 aa17.99■□□□□ 0.47
COMMD4-225ENST00000569245 TDRD7Q8NHU6 1098 aaKnown RBP17.99■□□□□ 0.47
COMMD4-225ENST00000569245 TLL2Q9Y6L7 1015 aa17.99■□□□□ 0.47
COMMD4-225ENST00000569245 SRGAP3O43295 1099 aa17.98■□□□□ 0.47
COMMD4-225ENST00000569245 SLC5A1P13866 664 aa17.98■□□□□ 0.47
COMMD4-225ENST00000569245 DZIP1LQ8IYY4 767 aaKnown RBP17.98■□□□□ 0.47
COMMD4-225ENST00000569245 CEP126Q9P2H0 1117 aa17.98■□□□□ 0.47
COMMD4-225ENST00000569245 FBXO3Q9UK99 471 aa17.98■□□□□ 0.47
COMMD4-225ENST00000569245 IQSEC3Q9UPP2 1182 aaPredicted RBP17.98■□□□□ 0.47
COMMD4-225ENST00000569245 PA2G4Q9UQ80 394 aaKnown RBP17.98■□□□□ 0.47
COMMD4-225ENST00000569245 WNT10BO00744 389 aa17.97■□□□□ 0.47
COMMD4-225ENST00000569245 CIAO1O76071 339 aa17.97■□□□□ 0.47
COMMD4-225ENST00000569245 ECE1P42892 770 aa17.97■□□□□ 0.47
COMMD4-225ENST00000569245 BCAMP50895 628 aa17.97■□□□□ 0.47
COMMD4-225ENST00000569245 FKBP1AP62942 108 aaKnown RBP17.97■□□□□ 0.47
COMMD4-225ENST00000569245 CHAF1AQ13111 956 aaPredicted RBP17.97■□□□□ 0.47
COMMD4-225ENST00000569245 DLGAP5Q15398 846 aa17.97■□□□□ 0.47
COMMD4-225ENST00000569245 MFSD14BQ5SR56 506 aa17.97■□□□□ 0.47
COMMD4-225ENST00000569245 ATG9AQ7Z3C6 839 aa17.97■□□□□ 0.47
COMMD4-225ENST00000569245 FBXO33Q7Z6M2 555 aa17.97■□□□□ 0.47
COMMD4-225ENST00000569245 SAPCD2Q86UD0 394 aa17.97■□□□□ 0.47
COMMD4-225ENST00000569245 C2orf69Q8N8R5 385 aa17.97■□□□□ 0.47
COMMD4-225ENST00000569245 SCAF8Q9UPN6 1271 aaKnown RBP17.97■□□□□ 0.47
COMMD4-225ENST00000569245 WDR33Q9C0J8 1336 aaKnown RBP17.97■□□□□ 0.47
COMMD4-225ENST00000569245 HSPA1AP0DMV8 641 aaKnown RBP17.96■□□□□ 0.47
COMMD4-225ENST00000569245 HSPA1BP0DMV9 641 aaKnown RBP17.96■□□□□ 0.47
COMMD4-225ENST00000569245 IL15P40933 162 aaPredicted RBP17.96■□□□□ 0.47
COMMD4-225ENST00000569245 RBM5P52756 815 aaKnown RBP eCLIP17.96■□□□□ 0.47
COMMD4-225ENST00000569245 C20orf194Q5TEA3 1177 aa17.96■□□□□ 0.47
COMMD4-225ENST00000569245 ERICH6BQ5W0A0 696 aa17.96■□□□□ 0.47
COMMD4-225ENST00000569245 CYP4F22Q6NT55 531 aa17.96■□□□□ 0.47
COMMD4-225ENST00000569245 ITPRIPQ8IWB1 547 aa17.96■□□□□ 0.47
COMMD4-225ENST00000569245 LPIN2Q92539 896 aa17.96■□□□□ 0.47
COMMD4-225ENST00000569245 CDCA5Q96FF9 252 aa17.96■□□□□ 0.47
COMMD4-225ENST00000569245 CAPNS2Q96L46 248 aa17.96■□□□□ 0.47
COMMD4-225ENST00000569245 COPRSQ9NQ92 184 aa17.96■□□□□ 0.47
COMMD4-225ENST00000569245 FAM205AQ6ZU69 1335 aa17.96■□□□□ 0.46
COMMD4-225ENST00000569245 PITPNM2Q9BZ72 1349 aa17.96■□□□□ 0.46
COMMD4-225ENST00000569245 FGFR2P21802 821 aa17.95■□□□□ 0.46
COMMD4-225ENST00000569245 HUNKP57058 714 aa17.95■□□□□ 0.46
COMMD4-225ENST00000569245 GBA2Q9HCG7 927 aaPredicted RBP17.95■□□□□ 0.46
COMMD4-225ENST00000569245 PSME4Q14997 1843 aa17.94■□□□□ 0.46
COMMD4-225ENST00000569245 IRX6P78412 446 aaPredicted RBP17.94■□□□□ 0.46
COMMD4-225ENST00000569245 ATP2B3Q16720 1220 aa17.94■□□□□ 0.46
COMMD4-225ENST00000569245 CFAP100Q494V2 611 aa17.94■□□□□ 0.46
COMMD4-225ENST00000569245 TTF2Q9UNY4 1162 aaKnown RBP17.94■□□□□ 0.46
COMMD4-225ENST00000569245 GTF3C3Q9Y5Q9 886 aa17.94■□□□□ 0.46
COMMD4-225ENST00000569245 MYO1BO43795 1136 aa17.93■□□□□ 0.46
COMMD4-225ENST00000569245 MTX1Q13505 466 aa17.93■□□□□ 0.46
COMMD4-225ENST00000569245 PRAMEF18Q5VWM3 479 aa17.93■□□□□ 0.46
COMMD4-225ENST00000569245 PANK1Q8TE04 598 aa17.93■□□□□ 0.46
COMMD4-225ENST00000569245 AIDAQ96BJ3 306 aa17.93■□□□□ 0.46
COMMD4-225ENST00000569245 A0A1B0GUL6 1792 aa17.93■□□□□ 0.46
COMMD4-225ENST00000569245 RLBP1P12271 317 aa17.92■□□□□ 0.46
COMMD4-225ENST00000569245 APOBEC3FQ8IUX4 373 aaKnown RBP17.92■□□□□ 0.46
COMMD4-225ENST00000569245 MTMR14Q8NCE2 650 aa17.92■□□□□ 0.46
COMMD4-225ENST00000569245 TBC1D22AQ8WUA7 517 aa17.92■□□□□ 0.46
COMMD4-225ENST00000569245 HHIPL1Q96JK4 782 aa17.92■□□□□ 0.46
COMMD4-225ENST00000569245 GNL3LQ9NVN8 582 aaKnown RBP17.92■□□□□ 0.46
COMMD4-225ENST00000569245 PCDHAC2Q9Y5I4 1007 aa17.92■□□□□ 0.46
COMMD4-225ENST00000569245 ZBED3Q96IU2 234 aaPredicted RBP17.91■□□□□ 0.46
COMMD4-225ENST00000569245 CRBNQ96SW2 442 aa17.91■□□□□ 0.46
COMMD4-225ENST00000569245 CLRN2A0PK11 232 aa17.9■□□□□ 0.46
COMMD4-225ENST00000569245 SPDYE2BA6NHP3 402 aa17.9■□□□□ 0.46
COMMD4-225ENST00000569245 AOC2O75106 756 aa17.9■□□□□ 0.46
COMMD4-225ENST00000569245 SPDYE6P0CI01 402 aa17.9■□□□□ 0.46
COMMD4-225ENST00000569245 NF2P35240 595 aa17.9■□□□□ 0.46
COMMD4-225ENST00000569245 MAP2K1Q02750 393 aaPredicted RBP17.9■□□□□ 0.46
COMMD4-225ENST00000569245 G3BP1Q13283 466 aaKnown RBP eCLIP17.9■□□□□ 0.462e-6■□□□□ 9.5
COMMD4-225ENST00000569245 TTLL12Q14166 644 aaPredicted RBP17.9■□□□□ 0.46
COMMD4-225ENST00000569245 PRMT6Q96LA8 375 aaPredicted RBP17.9■□□□□ 0.46
COMMD4-225ENST00000569245 C1orf115Q9H7X2 142 aa17.9■□□□□ 0.46
COMMD4-225ENST00000569245 VEZTQ9HBM0 779 aa17.9■□□□□ 0.46
COMMD4-225ENST00000569245 TRPM7Q96QT4 1865 aa17.9■□□□□ 0.46
COMMD4-225ENST00000569245 PNMA6EA0A0J9YXQ4 647 aa17.89■□□□□ 0.45
COMMD4-225ENST00000569245 ZBTB7BO15156 539 aaPredicted RBP17.89■□□□□ 0.45
COMMD4-225ENST00000569245 ZNF157P51786 506 aaPredicted RBP17.89■□□□□ 0.45
COMMD4-225ENST00000569245 TFCP2Q12800 502 aa17.89■□□□□ 0.45
COMMD4-225ENST00000569245 MVPQ14764 893 aaKnown RBP17.89■□□□□ 0.45
COMMD4-225ENST00000569245 BEGAINQ9BUH8 593 aa17.89■□□□□ 0.45
COMMD4-225ENST00000569245 SERPINA10Q9UK55 444 aa17.89■□□□□ 0.45
COMMD4-225ENST00000569245 AKAP2Q9Y2D5 859 aa17.89■□□□□ 0.45
COMMD4-225ENST00000569245 MAP2K2P36507 400 aa17.88■□□□□ 0.45
COMMD4-225ENST00000569245 CRKP46108 304 aa17.88■□□□□ 0.45
COMMD4-225ENST00000569245 TIMM10P62072 90 aa17.88■□□□□ 0.45
COMMD4-225ENST00000569245 RGMBQ6NW40 437 aa17.88■□□□□ 0.45
COMMD4-225ENST00000569245 EXOC6Q8TAG9 804 aa17.88■□□□□ 0.45
COMMD4-225ENST00000569245 WDR66Q8TBY9 1149 aa17.88■□□□□ 0.45
COMMD4-225ENST00000569245 NEUROD6Q96NK8 337 aa17.88■□□□□ 0.45
COMMD4-225ENST00000569245 DEFB129Q9H1M3 183 aa17.88■□□□□ 0.45
COMMD4-225ENST00000569245 COG6Q9Y2V7 657 aa17.88■□□□□ 0.45
COMMD4-225ENST00000569245 ADORA1P30542 326 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 1701.3 ms