RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 IL1R1P14778 569 aa11.02□□□□□ -0.65
SNRPA1-206ENST00000558059 RFX5P48382 616 aaPredicted RBP11.02□□□□□ -0.65
SNRPA1-206ENST00000558059 SCARF1Q14162 830 aa11.02□□□□□ -0.65
SNRPA1-206ENST00000558059 KRT26Q7Z3Y9 468 aa11.02□□□□□ -0.65
SNRPA1-206ENST00000558059 KLHDC4Q8TBB5 520 aa11.02□□□□□ -0.65
SNRPA1-206ENST00000558059 FBXW7Q969H0 707 aa11.02□□□□□ -0.65
SNRPA1-206ENST00000558059 DCPSQ96C86 337 aaKnown RBP11.02□□□□□ -0.65
SNRPA1-206ENST00000558059 MS4A3Q96HJ5 214 aa11.02□□□□□ -0.65
SNRPA1-206ENST00000558059 TLL2Q9Y6L7 1015 aa11.02□□□□□ -0.65
SNRPA1-206ENST00000558059 MYO3BQ8WXR4 1341 aa11.02□□□□□ -0.65
SNRPA1-206ENST00000558059 KIF16BQ96L93 1317 aa11.02□□□□□ -0.65
SNRPA1-206ENST00000558059 ADM5C9JUS6 153 aa11.01□□□□□ -0.65
SNRPA1-206ENST00000558059 HSPA1AP0DMV8 641 aaKnown RBP11.01□□□□□ -0.65
SNRPA1-206ENST00000558059 HSPA1BP0DMV9 641 aaKnown RBP11.01□□□□□ -0.65
SNRPA1-206ENST00000558059 INTS3Q68E01 1043 aaKnown RBP11.01□□□□□ -0.65
SNRPA1-206ENST00000558059 ASTLQ6HA08 431 aaPredicted RBP11.01□□□□□ -0.65
SNRPA1-206ENST00000558059 ZNF804AQ7Z570 1209 aa11.01□□□□□ -0.65
SNRPA1-206ENST00000558059 SAPCD2Q86UD0 394 aa11.01□□□□□ -0.65
SNRPA1-206ENST00000558059 CERS5Q8N5B7 392 aa11.01□□□□□ -0.65
SNRPA1-206ENST00000558059 VGLL2Q8N8G2 317 aa11.01□□□□□ -0.65
SNRPA1-206ENST00000558059 FAM84BQ96KN1 310 aaPredicted RBP11.01□□□□□ -0.65
SNRPA1-206ENST00000558059 GGA3Q9NZ52 723 aa11.01□□□□□ -0.65
SNRPA1-206ENST00000558059 TNNQ9UQP3 1299 aa11.01□□□□□ -0.65
SNRPA1-206ENST00000558059 MROH5Q6ZUA9 1318 aa11.01□□□□□ -0.65
SNRPA1-206ENST00000558059 WDR33Q9C0J8 1336 aaKnown RBP11.01□□□□□ -0.65
SNRPA1-206ENST00000558059 IPO8O15397 1037 aaKnown RBP11□□□□□ -0.65
SNRPA1-206ENST00000558059 UBTFL1P0CB47 393 aaPredicted RBP11□□□□□ -0.65
SNRPA1-206ENST00000558059 TRIM27P14373 513 aa11□□□□□ -0.65
SNRPA1-206ENST00000558059 GYG1P46976 350 aa11□□□□□ -0.65
SNRPA1-206ENST00000558059 MMP14P50281 582 aa11□□□□□ -0.65
SNRPA1-206ENST00000558059 PTPN12Q05209 780 aaKnown RBP11□□□□□ -0.65
SNRPA1-206ENST00000558059 NBPF9Q3BBW0 867 aa11□□□□□ -0.65
SNRPA1-206ENST00000558059 METTL24Q5JXM2 366 aa11□□□□□ -0.65
SNRPA1-206ENST00000558059 ANGEL2Q5VTE6 544 aaKnown RBP11□□□□□ -0.65
SNRPA1-206ENST00000558059 KIAA0825Q8IV33 1275 aa11□□□□□ -0.65
SNRPA1-206ENST00000558059 OGFOD1Q8N543 542 aa11□□□□□ -0.65
SNRPA1-206ENST00000558059 TDRD7Q8NHU6 1098 aaKnown RBP11□□□□□ -0.65
SNRPA1-206ENST00000558059 MEIS3Q99687 375 aa11□□□□□ -0.65
SNRPA1-206ENST00000558059 ZNF408Q9H9D4 720 aa11□□□□□ -0.65
SNRPA1-206ENST00000558059 PLSCR2Q9NRY7 297 aa11□□□□□ -0.65
SNRPA1-206ENST00000558059 EYA2O00167 538 aa10.99□□□□□ -0.65
SNRPA1-206ENST00000558059 WNT10BO00744 389 aa10.99□□□□□ -0.65
SNRPA1-206ENST00000558059 SASH1O94885 1247 aa10.99□□□□□ -0.65
SNRPA1-206ENST00000558059 PDE8BO95263 885 aa10.99□□□□□ -0.65
SNRPA1-206ENST00000558059 HIBADHP31937 336 aaKnown RBP10.99□□□□□ -0.65
SNRPA1-206ENST00000558059 FKBP1AP62942 108 aaKnown RBP10.99□□□□□ -0.65
SNRPA1-206ENST00000558059 CYP4F22Q6NT55 531 aa10.99□□□□□ -0.65
SNRPA1-206ENST00000558059 ATF7IPQ6VMQ6 1270 aa10.99□□□□□ -0.65
SNRPA1-206ENST00000558059 ATG9AQ7Z3C6 839 aa10.99□□□□□ -0.65
SNRPA1-206ENST00000558059 FBXO33Q7Z6M2 555 aa10.99□□□□□ -0.65
SNRPA1-206ENST00000558059 SULF1Q8IWU6 871 aa10.99□□□□□ -0.65
SNRPA1-206ENST00000558059 ZBED3Q96IU2 234 aaPredicted RBP10.99□□□□□ -0.65
SNRPA1-206ENST00000558059 HHIPL1Q96JK4 782 aa10.99□□□□□ -0.65
SNRPA1-206ENST00000558059 CAPNS2Q96L46 248 aa10.99□□□□□ -0.65
SNRPA1-206ENST00000558059 LRRFIP2Q9Y608 721 aaKnown RBP10.99□□□□□ -0.65
SNRPA1-206ENST00000558059 ZBED9Q6R2W3 1325 aa10.99□□□□□ -0.65
SNRPA1-206ENST00000558059 FAM205AQ6ZU69 1335 aa10.99□□□□□ -0.65
SNRPA1-206ENST00000558059 PITPNM2Q9BZ72 1349 aa10.99□□□□□ -0.65
SNRPA1-206ENST00000558059 FGFR2P21802 821 aa10.98□□□□□ -0.65
SNRPA1-206ENST00000558059 ECE1P42892 770 aa10.98□□□□□ -0.65
SNRPA1-206ENST00000558059 FRAT1Q92837 279 aaPredicted RBP10.98□□□□□ -0.65
SNRPA1-206ENST00000558059 CDCA5Q96FF9 252 aa10.98□□□□□ -0.65
SNRPA1-206ENST00000558059 WBP1LQ9NX94 342 aa10.98□□□□□ -0.65
SNRPA1-206ENST00000558059 HDAC9Q9UKV0 1011 aa10.98□□□□□ -0.65
SNRPA1-206ENST00000558059 SCAF8Q9UPN6 1271 aaKnown RBP10.98□□□□□ -0.65
SNRPA1-206ENST00000558059 JAG2Q9Y219 1238 aa10.98□□□□□ -0.65
SNRPA1-206ENST00000558059 ATMINO43313 823 aaPredicted RBP10.97□□□□□ -0.65
SNRPA1-206ENST00000558059 GNAI3P08754 354 aa10.97□□□□□ -0.65
SNRPA1-206ENST00000558059 PAXIP1Q6ZW49 1069 aaPredicted RBP10.97□□□□□ -0.65
SNRPA1-206ENST00000558059 MTMR14Q8NCE2 650 aa10.97□□□□□ -0.65
SNRPA1-206ENST00000558059 CLUAP1Q96AJ1 413 aa10.97□□□□□ -0.65
SNRPA1-206ENST00000558059 GBA2Q9HCG7 927 aaPredicted RBP10.97□□□□□ -0.65
SNRPA1-206ENST00000558059 METRNQ9UJH8 293 aa10.97□□□□□ -0.65
SNRPA1-206ENST00000558059 HDAC5Q9UQL6 1122 aa10.97□□□□□ -0.65
SNRPA1-206ENST00000558059 THSD7BQ9C0I4 1608 aa10.97□□□□□ -0.65
SNRPA1-206ENST00000558059 ECM29Q5VYK3 1845 aa10.96□□□□□ -0.65
SNRPA1-206ENST00000558059 F8W031 263 aaPredicted RBP10.96□□□□□ -0.65
SNRPA1-206ENST00000558059 FOXN1O15353 648 aa10.96□□□□□ -0.65
SNRPA1-206ENST00000558059 AOC2O75106 756 aa10.96□□□□□ -0.65
SNRPA1-206ENST00000558059 CIAO1O76071 339 aa10.96□□□□□ -0.65
SNRPA1-206ENST00000558059 BCAMP50895 628 aa10.96□□□□□ -0.65
SNRPA1-206ENST00000558059 HUNKP57058 714 aa10.96□□□□□ -0.65
SNRPA1-206ENST00000558059 GRM1Q13255 1194 aa10.96□□□□□ -0.65
SNRPA1-206ENST00000558059 PUM3Q15397 648 aaKnown RBP10.96□□□□□ -0.65
SNRPA1-206ENST00000558059 COL13A1Q5TAT6 717 aaPredicted RBP10.96□□□□□ -0.65
SNRPA1-206ENST00000558059 ZKSCAN2Q63HK3 967 aa10.96□□□□□ -0.65
SNRPA1-206ENST00000558059 C2orf69Q8N8R5 385 aa10.96□□□□□ -0.65
SNRPA1-206ENST00000558059 SIL1Q9H173 461 aa10.96□□□□□ -0.65
SNRPA1-206ENST00000558059 COPRSQ9NQ92 184 aa10.96□□□□□ -0.65
SNRPA1-206ENST00000558059 FBXO3Q9UK99 471 aa10.96□□□□□ -0.65
SNRPA1-206ENST00000558059 IQSEC3Q9UPP2 1182 aaPredicted RBP10.96□□□□□ -0.65
SNRPA1-206ENST00000558059 PA2G4Q9UQ80 394 aaKnown RBP10.96□□□□□ -0.65
SNRPA1-206ENST00000558059 PCDHAC2Q9Y5I4 1007 aa10.96□□□□□ -0.65
SNRPA1-206ENST00000558059 IFIT1P09914 478 aaKnown RBP10.95□□□□□ -0.66
SNRPA1-206ENST00000558059 MAP2K2P36507 400 aa10.95□□□□□ -0.66
SNRPA1-206ENST00000558059 MTX1Q13505 466 aa10.95□□□□□ -0.66
SNRPA1-206ENST00000558059 DLGAP5Q15398 846 aa10.95□□□□□ -0.66
SNRPA1-206ENST00000558059 CFAP100Q494V2 611 aa10.95□□□□□ -0.66
SNRPA1-206ENST00000558059 CAVIN4Q5BKX8 364 aa10.95□□□□□ -0.66
SNRPA1-206ENST00000558059 MFSD14BQ5SR56 506 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms