RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 PRAMEF18Q5VWM3 479 aa20.68■□□□□ 0.9
VSX1-207ENST00000557285 AIDAQ96BJ3 306 aa20.68■□□□□ 0.9
VSX1-207ENST00000557285 FAM84BQ96KN1 310 aaPredicted RBP20.68■□□□□ 0.9
VSX1-207ENST00000557285 GBA2Q9HCG7 927 aaPredicted RBP20.68■□□□□ 0.9
VSX1-207ENST00000557285 PDE8BO95263 885 aa20.67■□□□□ 0.9
VSX1-207ENST00000557285 PTPN12Q05209 780 aaKnown RBP20.67■□□□□ 0.9
VSX1-207ENST00000557285 INTS3Q68E01 1043 aaKnown RBP20.67■□□□□ 0.9
VSX1-207ENST00000557285 ATF7IPQ6VMQ6 1270 aa20.67■□□□□ 0.9
VSX1-207ENST00000557285 C2orf69Q8N8R5 385 aa20.67■□□□□ 0.9
VSX1-207ENST00000557285 EYA2O00167 538 aa20.66■□□□□ 0.9
VSX1-207ENST00000557285 FOXN1O15353 648 aa20.66■□□□□ 0.9
VSX1-207ENST00000557285 FRAT2O75474 233 aaPredicted RBP20.66■□□□□ 0.9
VSX1-207ENST00000557285 CHAF1AQ13111 956 aaPredicted RBP20.66■□□□□ 0.9
VSX1-207ENST00000557285 COL13A1Q5TAT6 717 aaPredicted RBP20.66■□□□□ 0.9
VSX1-207ENST00000557285 VGLL2Q8N8G2 317 aa20.66■□□□□ 0.9
VSX1-207ENST00000557285 PCDHAC2Q9Y5I4 1007 aa20.66■□□□□ 0.9
VSX1-207ENST00000557285 ZBED9Q6R2W3 1325 aa20.66■□□□□ 0.9
VSX1-207ENST00000557285 PITPNM2Q9BZ72 1349 aa20.65■□□□□ 0.9
VSX1-207ENST00000557285 RBM5P52756 815 aaKnown RBP eCLIP20.65■□□□□ 0.9
VSX1-207ENST00000557285 PUM3Q15397 648 aaKnown RBP20.65■□□□□ 0.9
VSX1-207ENST00000557285 DLGAP5Q15398 846 aa20.65■□□□□ 0.9
VSX1-207ENST00000557285 CAVIN4Q5BKX8 364 aa20.65■□□□□ 0.9
VSX1-207ENST00000557285 TDRD7Q8NHU6 1098 aaKnown RBP20.65■□□□□ 0.9
VSX1-207ENST00000557285 PA2G4Q9UQ80 394 aaKnown RBP20.65■□□□□ 0.9
VSX1-207ENST00000557285 HDAC5Q9UQL6 1122 aa20.65■□□□□ 0.9
VSX1-207ENST00000557285 GNAI3P08754 354 aa20.64■□□□□ 0.89
VSX1-207ENST00000557285 BCAMP50895 628 aa20.64■□□□□ 0.89
VSX1-207ENST00000557285 MFSD14BQ5SR56 506 aa20.64■□□□□ 0.89
VSX1-207ENST00000557285 ZKSCAN2Q63HK3 967 aa20.64■□□□□ 0.89
VSX1-207ENST00000557285 IFIT1P09914 478 aaKnown RBP20.63■□□□□ 0.89
VSX1-207ENST00000557285 CFAP100Q494V2 611 aa20.63■□□□□ 0.89
VSX1-207ENST00000557285 FBXO33Q7Z6M2 555 aa20.63■□□□□ 0.89
VSX1-207ENST00000557285 WBP1LQ9NX94 342 aa20.63■□□□□ 0.89
VSX1-207ENST00000557285 FAM205AQ6ZU69 1335 aa20.62■□□□□ 0.89
VSX1-207ENST00000557285 SLC5A1P13866 664 aa20.62■□□□□ 0.89
VSX1-207ENST00000557285 MAP2K1Q02750 393 aaPredicted RBP20.62■□□□□ 0.89
VSX1-207ENST00000557285 ATG9AQ7Z3C6 839 aa20.62■□□□□ 0.89
VSX1-207ENST00000557285 TMEM57Q8N5G2 664 aa20.62■□□□□ 0.89
VSX1-207ENST00000557285 THSD7BQ9C0I4 1608 aa20.62■□□□□ 0.89
VSX1-207ENST00000557285 CLRN2A0PK11 232 aa20.61■□□□□ 0.89
VSX1-207ENST00000557285 SRGAP3O43295 1099 aa20.61■□□□□ 0.89
VSX1-207ENST00000557285 ZNF157P51786 506 aaPredicted RBP20.61■□□□□ 0.89
VSX1-207ENST00000557285 FKBP1AP62942 108 aaKnown RBP20.61■□□□□ 0.89
VSX1-207ENST00000557285 TTLL12Q14166 644 aaPredicted RBP20.61■□□□□ 0.89
VSX1-207ENST00000557285 MOB2Q70IA6 237 aa20.61■□□□□ 0.89
VSX1-207ENST00000557285 APOBEC3FQ8IUX4 373 aaKnown RBP20.61■□□□□ 0.89
VSX1-207ENST00000557285 FTSJ3Q8IY81 847 aaKnown RBP20.61■□□□□ 0.89
VSX1-207ENST00000557285 HHIPL1Q96JK4 782 aa20.61■□□□□ 0.89
VSX1-207ENST00000557285 TTF2Q9UNY4 1162 aaKnown RBP20.61■□□□□ 0.89
VSX1-207ENST00000557285 ARAP2Q8WZ64 1704 aa20.61■□□□□ 0.89
VSX1-207ENST00000557285 MYH13Q9UKX3 1938 aa20.61■□□□□ 0.89
VSX1-207ENST00000557285 FGFR2P21802 821 aa20.6■□□□□ 0.89
VSX1-207ENST00000557285 MMP14P50281 582 aa20.6■□□□□ 0.89
VSX1-207ENST00000557285 RGMBQ6NW40 437 aa20.6■□□□□ 0.89
VSX1-207ENST00000557285 BEGAINQ9BUH8 593 aa20.6■□□□□ 0.89
VSX1-207ENST00000557285 VEZTQ9HBM0 779 aa20.6■□□□□ 0.89
VSX1-207ENST00000557285 CEP126Q9P2H0 1117 aa20.6■□□□□ 0.89
VSX1-207ENST00000557285 ECM29Q5VYK3 1845 aa20.6■□□□□ 0.89
VSX1-207ENST00000557285 AOX1Q06278 1338 aa20.59■□□□□ 0.89
VSX1-207ENST00000557285 CIAO1O76071 339 aa20.59■□□□□ 0.89
VSX1-207ENST00000557285 GNAI2P04899 355 aa20.59■□□□□ 0.89
VSX1-207ENST00000557285 CTCFP49711 727 aaPredicted RBP20.59■□□□□ 0.89
VSX1-207ENST00000557285 PRKG1Q13976 671 aa20.59■□□□□ 0.89
VSX1-207ENST00000557285 GRIK5Q16478 980 aa20.59■□□□□ 0.89
VSX1-207ENST00000557285 ATP2B3Q16720 1220 aa20.59■□□□□ 0.89
VSX1-207ENST00000557285 LPIN2Q92539 896 aa20.59■□□□□ 0.89
VSX1-207ENST00000557285 ZBED3Q96IU2 234 aaPredicted RBP20.59■□□□□ 0.89
VSX1-207ENST00000557285 PAPPA2Q9BXP8 1791 aa20.59■□□□□ 0.89
VSX1-207ENST00000557285 SPDYE2BA6NHP3 402 aa20.58■□□□□ 0.89
VSX1-207ENST00000557285 MYO1BO43795 1136 aa20.58■□□□□ 0.89
VSX1-207ENST00000557285 SPDYE6P0CI01 402 aa20.58■□□□□ 0.89
VSX1-207ENST00000557285 MAP2K2P36507 400 aa20.58■□□□□ 0.89
VSX1-207ENST00000557285 LBX1P52954 281 aa20.58■□□□□ 0.89
VSX1-207ENST00000557285 PRMT6Q96LA8 375 aaPredicted RBP20.58■□□□□ 0.89
VSX1-207ENST00000557285 ZIC5Q96T25 663 aa20.58■□□□□ 0.89
VSX1-207ENST00000557285 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.58■□□□□ 0.89
VSX1-207ENST00000557285 TSKSQ9UJT2 592 aa20.58■□□□□ 0.89
VSX1-207ENST00000557285 UBE2Q2LH0YL09 131 aa20.57■□□□□ 0.88
VSX1-207ENST00000557285 NF2P35240 595 aa20.57■□□□□ 0.88
VSX1-207ENST00000557285 IL15P40933 162 aaPredicted RBP20.57■□□□□ 0.88
VSX1-207ENST00000557285 ITPRIPQ8IWB1 547 aa20.57■□□□□ 0.88
VSX1-207ENST00000557285 IFFO2Q5TF58 517 aa20.56■□□□□ 0.88
VSX1-207ENST00000557285 TNS4Q8IZW8 715 aa20.56■□□□□ 0.88
VSX1-207ENST00000557285 MTMR14Q8NCE2 650 aa20.56■□□□□ 0.88
VSX1-207ENST00000557285 DEFB129Q9H1M3 183 aa20.56■□□□□ 0.88
VSX1-207ENST00000557285 C1orf115Q9H7X2 142 aa20.56■□□□□ 0.88
VSX1-207ENST00000557285 COPRSQ9NQ92 184 aa20.56■□□□□ 0.88
VSX1-207ENST00000557285 FBXO3Q9UK99 471 aa20.56■□□□□ 0.88
VSX1-207ENST00000557285 HSPA8P11142 646 aaKnown RBP20.55■□□□□ 0.88
VSX1-207ENST00000557285 RLBP1P12271 317 aa20.55■□□□□ 0.88
VSX1-207ENST00000557285 NOGQ13253 232 aa20.55■□□□□ 0.88
VSX1-207ENST00000557285 DZIP1LQ8IYY4 767 aaKnown RBP20.55■□□□□ 0.88
VSX1-207ENST00000557285 TBC1D22AQ8WUA7 517 aa20.55■□□□□ 0.88
VSX1-207ENST00000557285 FZD1Q9UP38 647 aa20.55■□□□□ 0.88
VSX1-207ENST00000557285 PNMA6EA0A0J9YXQ4 647 aa20.54■□□□□ 0.88
VSX1-207ENST00000557285 FAM155AB1AL88 458 aaPredicted RBP20.54■□□□□ 0.88
VSX1-207ENST00000557285 ADORA1P30542 326 aa20.54■□□□□ 0.88
VSX1-207ENST00000557285 CRKP46108 304 aa20.54■□□□□ 0.88
VSX1-207ENST00000557285 CCDC102AQ96A19 550 aa20.54■□□□□ 0.88
VSX1-207ENST00000557285 TDRD3Q9H7E2 651 aaKnown RBP20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms