RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 DLGAP5Q15398 846 aa18.31■□□□□ 0.52
VRTN-202ENST00000557177 NOM1Q5C9Z4 860 aaKnown RBP18.31■□□□□ 0.52
VRTN-202ENST00000557177 ZNF804AQ7Z570 1209 aa18.31■□□□□ 0.52
VRTN-202ENST00000557177 DEFB129Q9H1M3 183 aa18.31■□□□□ 0.52
VRTN-202ENST00000557177 PRKG1Q13976 671 aa18.3■□□□□ 0.52
VRTN-202ENST00000557177 CCDC57Q2TAC2 916 aa18.3■□□□□ 0.52
VRTN-202ENST00000557177 ZNF296Q8WUU4 475 aaPredicted RBP18.3■□□□□ 0.52
VRTN-202ENST00000557177 ZNF594Q96JF6 807 aaPredicted RBP18.3■□□□□ 0.52
VRTN-202ENST00000557177 CFHR5Q9BXR6 569 aa18.3■□□□□ 0.52
VRTN-202ENST00000557177 PCDHAC2Q9Y5I4 1007 aa18.3■□□□□ 0.52
VRTN-202ENST00000557177 SREBF2Q12772 1141 aa18.29■□□□□ 0.52
VRTN-202ENST00000557177 MKRN3Q13064 507 aaKnown RBP18.29■□□□□ 0.52
VRTN-202ENST00000557177 MAP3K11Q16584 847 aa18.29■□□□□ 0.52
VRTN-202ENST00000557177 LDHAL6AQ6ZMR3 332 aa18.29■□□□□ 0.52
VRTN-202ENST00000557177 ANGEL1Q9UNK9 670 aaKnown RBP18.29■□□□□ 0.52
VRTN-202ENST00000557177 PPP2R3BQ9Y5P8 575 aa18.29■□□□□ 0.52
VRTN-202ENST00000557177 ARAP2Q8WZ64 1704 aa18.29■□□□□ 0.52
VRTN-202ENST00000557177 SPDYE2BA6NHP3 402 aa18.28■□□□□ 0.52
VRTN-202ENST00000557177 ALDH1L1O75891 902 aa18.28■□□□□ 0.52
VRTN-202ENST00000557177 SPDYE6P0CI01 402 aa18.28■□□□□ 0.52
VRTN-202ENST00000557177 SOX10P56693 466 aa18.28■□□□□ 0.52
VRTN-202ENST00000557177 PKN2Q16513 984 aaKnown RBP18.28■□□□□ 0.52
VRTN-202ENST00000557177 CFAP100Q494V2 611 aa18.28■□□□□ 0.52
VRTN-202ENST00000557177 SPRYD7Q5W111 196 aa18.28■□□□□ 0.52
VRTN-202ENST00000557177 FZD1Q9UP38 647 aa18.28■□□□□ 0.52
VRTN-202ENST00000557177 HTTP42858 3142 aa18.27■□□□□ 0.52
VRTN-202ENST00000557177 AOX1Q06278 1338 aa18.27■□□□□ 0.52
VRTN-202ENST00000557177 F8W031 263 aaPredicted RBP18.27■□□□□ 0.52
VRTN-202ENST00000557177 GPR25O00155 361 aa18.27■□□□□ 0.52
VRTN-202ENST00000557177 SLC34A2O95436 690 aa18.27■□□□□ 0.52
VRTN-202ENST00000557177 TAF7LQ5H9L4 462 aa18.27■□□□□ 0.52
VRTN-202ENST00000557177 KAZALD1Q96I82 304 aa18.27■□□□□ 0.52
VRTN-202ENST00000557177 PRMT6Q96LA8 375 aaPredicted RBP18.27■□□□□ 0.52
VRTN-202ENST00000557177 CNNM1Q9NRU3 951 aa18.27■□□□□ 0.52
VRTN-202ENST00000557177 C9orf78Q9NZ63 289 aaPredicted RBP18.27■□□□□ 0.52
VRTN-202ENST00000557177 HPS5Q9UPZ3 1129 aa18.27■□□□□ 0.52
VRTN-202ENST00000557177 FAM205AQ6ZU69 1335 aa18.26■□□□□ 0.51
VRTN-202ENST00000557177 MYO1BO43795 1136 aa18.26■□□□□ 0.51
VRTN-202ENST00000557177 SRCIN1Q9C0H9 1055 aa18.26■□□□□ 0.51
VRTN-202ENST00000557177 JAG2Q9Y219 1238 aa18.26■□□□□ 0.51
VRTN-202ENST00000557177 CLRN2A0PK11 232 aa18.25■□□□□ 0.51
VRTN-202ENST00000557177 UNCXA6NJT0 531 aa18.25■□□□□ 0.51
VRTN-202ENST00000557177 PLIN1O60240 522 aa18.25■□□□□ 0.51
VRTN-202ENST00000557177 UBE4AQ14139 1066 aa18.25■□□□□ 0.51
VRTN-202ENST00000557177 SLC4A10Q6U841 1118 aa18.25■□□□□ 0.51
VRTN-202ENST00000557177 R3HDMLQ9H3Y0 253 aa18.25■□□□□ 0.51
VRTN-202ENST00000557177 PDE4DIPQ5VU43 2346 aa18.24■□□□□ 0.51
VRTN-202ENST00000557177 UTYO14607 1347 aa18.24■□□□□ 0.51
VRTN-202ENST00000557177 ZNF521Q96K83 1311 aa18.24■□□□□ 0.51
VRTN-202ENST00000557177 ZNF316A6NFI3 1004 aaPredicted RBP18.24■□□□□ 0.51
VRTN-202ENST00000557177 PPP1R12BO60237 982 aaPredicted RBP18.24■□□□□ 0.51
VRTN-202ENST00000557177 ZBTB48P10074 688 aaPredicted RBP18.24■□□□□ 0.51
VRTN-202ENST00000557177 TDRD7Q8NHU6 1098 aaKnown RBP18.24■□□□□ 0.51
VRTN-202ENST00000557177 SUCLG2Q96I99 432 aa18.24■□□□□ 0.51
VRTN-202ENST00000557177 CLMNQ96JQ2 1002 aa18.24■□□□□ 0.51
VRTN-202ENST00000557177 OTOFQ9HC10 1997 aa18.24■□□□□ 0.51
VRTN-202ENST00000557177 MANSC4A6NHS7 340 aaPredicted RBP18.23■□□□□ 0.51
VRTN-202ENST00000557177 ALDH1A1P00352 501 aa18.23■□□□□ 0.51
VRTN-202ENST00000557177 NBPF7P0C2Y1 421 aaPredicted RBP18.23■□□□□ 0.51
VRTN-202ENST00000557177 SUPT20HL1Q3ZLR7 823 aa18.23■□□□□ 0.51
VRTN-202ENST00000557177 NBPF12Q5TAG4 269 aaPredicted RBP18.23■□□□□ 0.51
VRTN-202ENST00000557177 FAM9BQ8IZU0 186 aa18.23■□□□□ 0.51
VRTN-202ENST00000557177 SLC10A4Q96EP9 437 aa18.23■□□□□ 0.51
VRTN-202ENST00000557177 WNK4Q96J92 1243 aa18.23■□□□□ 0.51
VRTN-202ENST00000557177 FAM84BQ96KN1 310 aaPredicted RBP18.23■□□□□ 0.51
VRTN-202ENST00000557177 PUS3Q9BZE2 481 aaKnown RBP18.23■□□□□ 0.51
VRTN-202ENST00000557177 VEZTQ9HBM0 779 aa18.23■□□□□ 0.51
VRTN-202ENST00000557177 FKTNO75072 461 aa18.22■□□□□ 0.51
VRTN-202ENST00000557177 HIBADHP31937 336 aaKnown RBP18.22■□□□□ 0.51
VRTN-202ENST00000557177 GYG1P46976 350 aa18.22■□□□□ 0.51
VRTN-202ENST00000557177 INHBEP58166 350 aa18.22■□□□□ 0.51
VRTN-202ENST00000557177 MFSD14BQ5SR56 506 aa18.22■□□□□ 0.51
VRTN-202ENST00000557177 SERPINA10Q9UK55 444 aa18.22■□□□□ 0.51
VRTN-202ENST00000557177 RIPOR2Q9Y4F9 1068 aa18.22■□□□□ 0.51
VRTN-202ENST00000557177 CENPFP49454 3210 aa18.22■□□□□ 0.51
VRTN-202ENST00000557177 ZEB1P37275 1124 aaPredicted RBP18.21■□□□□ 0.51
VRTN-202ENST00000557177 RBM5P52756 815 aaKnown RBP eCLIP18.21■□□□□ 0.51
VRTN-202ENST00000557177 RASA3Q14644 834 aa18.21■□□□□ 0.51
VRTN-202ENST00000557177 RABL6Q3YEC7 729 aaPredicted RBP18.21■□□□□ 0.51
VRTN-202ENST00000557177 SPDYE2Q495Y8 402 aa18.21■□□□□ 0.51
VRTN-202ENST00000557177 FBXO46Q6PJ61 603 aaPredicted RBP18.21■□□□□ 0.51
VRTN-202ENST00000557177 IFNL1Q8IU54 200 aa18.21■□□□□ 0.51
VRTN-202ENST00000557177 MROH5Q6ZUA9 1318 aa18.21■□□□□ 0.51
VRTN-202ENST00000557177 IGF2BP3O00425 579 aaKnown RBP eCLIP18.2■□□□□ 0.5
VRTN-202ENST00000557177 USP2O75604 605 aaPredicted RBP18.2■□□□□ 0.5
VRTN-202ENST00000557177 IREB2P48200 963 aaKnown RBP18.2■□□□□ 0.5
VRTN-202ENST00000557177 BICC1Q9H694 974 aaKnown RBP18.2■□□□□ 0.5
VRTN-202ENST00000557177 TTF2Q9UNY4 1162 aaKnown RBP18.2■□□□□ 0.5
VRTN-202ENST00000557177 GJA5P36382 358 aa18.19■□□□□ 0.5
VRTN-202ENST00000557177 TNFAIP1Q13829 316 aa18.19■□□□□ 0.5
VRTN-202ENST00000557177 MRPL50Q8N5N7 158 aaKnown RBP18.19■□□□□ 0.5
VRTN-202ENST00000557177 ANKRD44Q8N8A2 993 aa18.19■□□□□ 0.5
VRTN-202ENST00000557177 ZNF70Q9UC06 446 aaPredicted RBP18.19■□□□□ 0.5
VRTN-202ENST00000557177 FBXO33Q7Z6M2 555 aa18.18■□□□□ 0.5
VRTN-202ENST00000557177 DZIP1LQ8IYY4 767 aaKnown RBP18.18■□□□□ 0.5
VRTN-202ENST00000557177 ANKRD13AQ8IZ07 590 aa18.18■□□□□ 0.5
VRTN-202ENST00000557177 VGLL2Q8N8G2 317 aa18.18■□□□□ 0.5
VRTN-202ENST00000557177 TEPSINQ96N21 525 aa18.18■□□□□ 0.5
VRTN-202ENST00000557177 TDRD3Q9H7E2 651 aaKnown RBP18.18■□□□□ 0.5
VRTN-202ENST00000557177 BRCA2P51587 3418 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms