RNA–Protein interactions for RNA: ENST00000556909.1

VIPAS39-209, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-209ENST00000556909 EPHA10Q5JZY3 1008 aa23.25■■□□□ 1.31
VIPAS39-209ENST00000556909 ZNF804AQ7Z570 1209 aa23.25■■□□□ 1.31
VIPAS39-209ENST00000556909 MTMR14Q8NCE2 650 aa23.25■■□□□ 1.31
VIPAS39-209ENST00000556909 DEFB129Q9H1M3 183 aa23.25■■□□□ 1.31
VIPAS39-209ENST00000556909 SPINK5Q9NQ38 1064 aaPredicted RBP23.25■■□□□ 1.31
VIPAS39-209ENST00000556909 SREBF2Q12772 1141 aa23.24■■□□□ 1.31
VIPAS39-209ENST00000556909 LDLRAD1Q5T700 205 aa23.24■■□□□ 1.31
VIPAS39-209ENST00000556909 LMBR1LQ6UX01 489 aa23.24■■□□□ 1.31
VIPAS39-209ENST00000556909 ANGEL1Q9UNK9 670 aaKnown RBP23.24■■□□□ 1.31
VIPAS39-209ENST00000556909 FZD1Q9UP38 647 aa23.24■■□□□ 1.31
VIPAS39-209ENST00000556909 PCDHAC2Q9Y5I4 1007 aa23.24■■□□□ 1.31
VIPAS39-209ENST00000556909 OTOFQ9HC10 1997 aa23.23■■□□□ 1.31
VIPAS39-209ENST00000556909 GRM8O00222 908 aa23.23■■□□□ 1.31
VIPAS39-209ENST00000556909 ZNF594Q96JF6 807 aaPredicted RBP23.23■■□□□ 1.31
VIPAS39-209ENST00000556909 HPS5Q9UPZ3 1129 aa23.23■■□□□ 1.31
VIPAS39-209ENST00000556909 F8W031 263 aaPredicted RBP23.22■■□□□ 1.31
VIPAS39-209ENST00000556909 FKBP1AP62942 108 aaKnown RBP23.22■■□□□ 1.31
VIPAS39-209ENST00000556909 CCDC57Q2TAC2 916 aa23.22■■□□□ 1.31
VIPAS39-209ENST00000556909 NOM1Q5C9Z4 860 aaKnown RBP23.22■■□□□ 1.31
VIPAS39-209ENST00000556909 SPRYD7Q5W111 196 aa23.22■■□□□ 1.31
VIPAS39-209ENST00000556909 SPDYE2BA6NHP3 402 aa23.21■■□□□ 1.31
VIPAS39-209ENST00000556909 GPR25O00155 361 aa23.21■■□□□ 1.31
VIPAS39-209ENST00000556909 ANP32CO43423 234 aa23.21■■□□□ 1.31
VIPAS39-209ENST00000556909 SPDYE6P0CI01 402 aa23.21■■□□□ 1.31
VIPAS39-209ENST00000556909 PKN2Q16513 984 aaKnown RBP23.21■■□□□ 1.31
VIPAS39-209ENST00000556909 CFAP100Q494V2 611 aa23.21■■□□□ 1.31
VIPAS39-209ENST00000556909 TAF7LQ5H9L4 462 aa23.21■■□□□ 1.31
VIPAS39-209ENST00000556909 CFHR5Q9BXR6 569 aa23.21■■□□□ 1.31
VIPAS39-209ENST00000556909 JAG2Q9Y219 1238 aa23.21■■□□□ 1.31
VIPAS39-209ENST00000556909 PPP2R3BQ9Y5P8 575 aa23.21■■□□□ 1.31
VIPAS39-209ENST00000556909 AOX1Q06278 1338 aa23.2■■□□□ 1.3
VIPAS39-209ENST00000556909 CLRN2A0PK11 232 aa23.2■■□□□ 1.3
VIPAS39-209ENST00000556909 LDHAL6AQ6ZMR3 332 aa23.2■■□□□ 1.3
VIPAS39-209ENST00000556909 CNNM1Q9NRU3 951 aa23.2■■□□□ 1.3
VIPAS39-209ENST00000556909 MYO1BO43795 1136 aa23.19■■□□□ 1.3
VIPAS39-209ENST00000556909 PLIN1O60240 522 aa23.19■■□□□ 1.3
VIPAS39-209ENST00000556909 MAP3K11Q16584 847 aa23.19■■□□□ 1.3
VIPAS39-209ENST00000556909 PRMT6Q96LA8 375 aaPredicted RBP23.19■■□□□ 1.3
VIPAS39-209ENST00000556909 ALDH1L1O75891 902 aa23.18■■□□□ 1.3
VIPAS39-209ENST00000556909 R3HDMLQ9H3Y0 253 aa23.18■■□□□ 1.3
VIPAS39-209ENST00000556909 C9orf78Q9NZ63 289 aaPredicted RBP23.18■■□□□ 1.3
VIPAS39-209ENST00000556909 CLMNQ96JQ2 1002 aa23.17■■□□□ 1.3
VIPAS39-209ENST00000556909 VEZTQ9HBM0 779 aa23.17■■□□□ 1.3
VIPAS39-209ENST00000556909 FAM205AQ6ZU69 1335 aa23.16■■□□□ 1.3
VIPAS39-209ENST00000556909 MANSC4A6NHS7 340 aaPredicted RBP23.16■■□□□ 1.3
VIPAS39-209ENST00000556909 PPP1R12BO60237 982 aaPredicted RBP23.16■■□□□ 1.3
VIPAS39-209ENST00000556909 FKTNO75072 461 aa23.16■■□□□ 1.3
VIPAS39-209ENST00000556909 ZBTB48P10074 688 aaPredicted RBP23.16■■□□□ 1.3
VIPAS39-209ENST00000556909 SLC4A10Q6U841 1118 aa23.16■■□□□ 1.3
VIPAS39-209ENST00000556909 SLC10A4Q96EP9 437 aa23.16■■□□□ 1.3
VIPAS39-209ENST00000556909 WNK4Q96J92 1243 aa23.16■■□□□ 1.3
VIPAS39-209ENST00000556909 SRCIN1Q9C0H9 1055 aa23.16■■□□□ 1.3
VIPAS39-209ENST00000556909 HTTP42858 3142 aa23.16■■□□□ 1.3
VIPAS39-209ENST00000556909 ALDH1A1P00352 501 aa23.15■■□□□ 1.3
VIPAS39-209ENST00000556909 SUPT20HL1Q3ZLR7 823 aa23.15■■□□□ 1.3
VIPAS39-209ENST00000556909 NBPF12Q5TAG4 269 aaPredicted RBP23.15■■□□□ 1.3
VIPAS39-209ENST00000556909 SUCLG2Q96I99 432 aa23.15■■□□□ 1.3
VIPAS39-209ENST00000556909 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.15■■□□□ 1.3
VIPAS39-209ENST00000556909 RBM5P52756 815 aaKnown RBP eCLIP23.14■■□□□ 1.29
VIPAS39-209ENST00000556909 UBE4AQ14139 1066 aa23.14■■□□□ 1.29
VIPAS39-209ENST00000556909 FBXO46Q6PJ61 603 aaPredicted RBP23.14■■□□□ 1.29
VIPAS39-209ENST00000556909 IFNL1Q8IU54 200 aa23.14■■□□□ 1.29
VIPAS39-209ENST00000556909 TDRD7Q8NHU6 1098 aaKnown RBP23.14■■□□□ 1.29
VIPAS39-209ENST00000556909 KAZALD1Q96I82 304 aa23.14■■□□□ 1.29
VIPAS39-209ENST00000556909 UNCXA6NJT0 531 aa23.13■■□□□ 1.29
VIPAS39-209ENST00000556909 GYG1P46976 350 aa23.13■■□□□ 1.29
VIPAS39-209ENST00000556909 RASA3Q14644 834 aa23.13■■□□□ 1.29
VIPAS39-209ENST00000556909 MFSD14BQ5SR56 506 aa23.13■■□□□ 1.29
VIPAS39-209ENST00000556909 PUS3Q9BZE2 481 aaKnown RBP23.13■■□□□ 1.29
VIPAS39-209ENST00000556909 IGF2BP3O00425 579 aaKnown RBP eCLIP23.12■■□□□ 1.29
VIPAS39-209ENST00000556909 INHBEP58166 350 aa23.12■■□□□ 1.29
VIPAS39-209ENST00000556909 SPDYE2Q495Y8 402 aa23.12■■□□□ 1.29
VIPAS39-209ENST00000556909 TTF2Q9UNY4 1162 aaKnown RBP23.12■■□□□ 1.29
VIPAS39-209ENST00000556909 NBPF7P0C2Y1 421 aaPredicted RBP23.11■■□□□ 1.29
VIPAS39-209ENST00000556909 HIBADHP31937 336 aaKnown RBP23.11■■□□□ 1.29
VIPAS39-209ENST00000556909 IREB2P48200 963 aaKnown RBP23.11■■□□□ 1.29
VIPAS39-209ENST00000556909 FAM9BQ8IZU0 186 aa23.11■■□□□ 1.29
VIPAS39-209ENST00000556909 FAM84BQ96KN1 310 aaPredicted RBP23.11■■□□□ 1.29
VIPAS39-209ENST00000556909 SERPINA10Q9UK55 444 aa23.11■■□□□ 1.29
VIPAS39-209ENST00000556909 UTYO14607 1347 aa23.1■■□□□ 1.29
VIPAS39-209ENST00000556909 MYH13Q9UKX3 1938 aa23.1■■□□□ 1.29
VIPAS39-209ENST00000556909 USP2O75604 605 aaPredicted RBP23.1■■□□□ 1.29
VIPAS39-209ENST00000556909 GJA5P36382 358 aa23.1■■□□□ 1.29
VIPAS39-209ENST00000556909 ZNF70Q9UC06 446 aaPredicted RBP23.1■■□□□ 1.29
VIPAS39-209ENST00000556909 TNFAIP1Q13829 316 aa23.09■■□□□ 1.29
VIPAS39-209ENST00000556909 BICC1Q9H694 974 aaKnown RBP23.09■■□□□ 1.29
VIPAS39-209ENST00000556909 RIPOR2Q9Y4F9 1068 aa23.09■■□□□ 1.29
VIPAS39-209ENST00000556909 MROH5Q6ZUA9 1318 aa23.08■■□□□ 1.29
VIPAS39-209ENST00000556909 ZNF521Q96K83 1311 aa23.08■■□□□ 1.29
VIPAS39-209ENST00000556909 CENPFP49454 3210 aa23.08■■□□□ 1.29
VIPAS39-209ENST00000556909 ZNF316A6NFI3 1004 aaPredicted RBP23.08■■□□□ 1.29
VIPAS39-209ENST00000556909 RABL6Q3YEC7 729 aaPredicted RBP23.08■■□□□ 1.29
VIPAS39-209ENST00000556909 ANKRD13AQ8IZ07 590 aa23.08■■□□□ 1.29
VIPAS39-209ENST00000556909 TDRD3Q9H7E2 651 aaKnown RBP23.08■■□□□ 1.29
VIPAS39-209ENST00000556909 RBBP6Q7Z6E9 1792 aaKnown RBP23.07■■□□□ 1.28
VIPAS39-209ENST00000556909 CDAN1Q8IWY9 1227 aa23.07■■□□□ 1.28
VIPAS39-209ENST00000556909 DZIP1LQ8IYY4 767 aaKnown RBP23.07■■□□□ 1.28
VIPAS39-209ENST00000556909 TEPSINQ96N21 525 aa23.07■■□□□ 1.28
VIPAS39-209ENST00000556909 CRKP46108 304 aa23.06■■□□□ 1.28
VIPAS39-209ENST00000556909 GRIK5Q16478 980 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms