RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 SAGE1Q9NXZ1 904 aa19.68■□□□□ 0.74
VPS33A-206ENST00000542310 LAMB1P07942 1786 aa19.67■□□□□ 0.74
VPS33A-206ENST00000542310 CASP8AP2Q9UKL3 1982 aa19.67■□□□□ 0.74
VPS33A-206ENST00000542310 NF2P35240 595 aa19.67■□□□□ 0.74
VPS33A-206ENST00000542310 RASAL3Q86YV0 1011 aa19.67■□□□□ 0.74
VPS33A-206ENST00000542310 REM2Q8IYK8 340 aaPredicted RBP19.67■□□□□ 0.74
VPS33A-206ENST00000542310 CERS5Q8N5B7 392 aa19.67■□□□□ 0.74
VPS33A-206ENST00000542310 ANKRD44Q8N8A2 993 aa19.67■□□□□ 0.74
VPS33A-206ENST00000542310 FAM205AQ6ZU69 1335 aa19.67■□□□□ 0.74
VPS33A-206ENST00000542310 MYH13Q9UKX3 1938 aa19.66■□□□□ 0.74
VPS33A-206ENST00000542310 ZIC5Q96T25 663 aa19.66■□□□□ 0.74
VPS33A-206ENST00000542310 SMC4Q9NTJ3 1288 aa19.66■□□□□ 0.74
VPS33A-206ENST00000542310 RIPOR2Q9Y4F9 1068 aa19.66■□□□□ 0.74
VPS33A-206ENST00000542310 PLIN1O60240 522 aa19.65■□□□□ 0.74
VPS33A-206ENST00000542310 DLGAP5Q15398 846 aa19.65■□□□□ 0.74
VPS33A-206ENST00000542310 CDCA7LQ96GN5 454 aa19.65■□□□□ 0.74
VPS33A-206ENST00000542310 PPP2R3BQ9Y5P8 575 aa19.65■□□□□ 0.74
VPS33A-206ENST00000542310 KIF23Q02241 960 aaPredicted RBP19.64■□□□□ 0.73
VPS33A-206ENST00000542310 TDRD7Q8NHU6 1098 aaKnown RBP19.64■□□□□ 0.73
VPS33A-206ENST00000542310 PUS3Q9BZE2 481 aaKnown RBP19.64■□□□□ 0.73
VPS33A-206ENST00000542310 USP44Q9H0E7 712 aa19.64■□□□□ 0.73
VPS33A-206ENST00000542310 TSKSQ9UJT2 592 aa19.64■□□□□ 0.73
VPS33A-206ENST00000542310 KIF16BQ96L93 1317 aa19.63■□□□□ 0.73
VPS33A-206ENST00000542310 HIBADHP31937 336 aaKnown RBP19.63■□□□□ 0.73
VPS33A-206ENST00000542310 SPDYE2BA6NHP3 402 aa19.62■□□□□ 0.73
VPS33A-206ENST00000542310 MYO1BO43795 1136 aa19.62■□□□□ 0.73
VPS33A-206ENST00000542310 SPDYE6P0CI01 402 aa19.62■□□□□ 0.73
VPS33A-206ENST00000542310 VGLL2Q8N8G2 317 aa19.62■□□□□ 0.73
VPS33A-206ENST00000542310 SCAF8Q9UPN6 1271 aaKnown RBP19.62■□□□□ 0.73
VPS33A-206ENST00000542310 CFAP100Q494V2 611 aa19.61■□□□□ 0.73
VPS33A-206ENST00000542310 METTL24Q5JXM2 366 aa19.61■□□□□ 0.73
VPS33A-206ENST00000542310 ABHD8Q96I13 439 aa19.61■□□□□ 0.73
VPS33A-206ENST00000542310 FAM84BQ96KN1 310 aaPredicted RBP19.61■□□□□ 0.73
VPS33A-206ENST00000542310 PDE8BO95263 885 aa19.6■□□□□ 0.73
VPS33A-206ENST00000542310 GYG1P46976 350 aa19.6■□□□□ 0.73
VPS33A-206ENST00000542310 TTLL12Q14166 644 aaPredicted RBP19.6■□□□□ 0.73
VPS33A-206ENST00000542310 LRRC24Q50LG9 513 aa19.6■□□□□ 0.73
VPS33A-206ENST00000542310 MFSD14BQ5SR56 506 aa19.6■□□□□ 0.73
VPS33A-206ENST00000542310 PRAMEF18Q5VWM3 479 aa19.6■□□□□ 0.73
VPS33A-206ENST00000542310 ARMC9Q7Z3E5 817 aa19.6■□□□□ 0.73
VPS33A-206ENST00000542310 API5Q9BZZ5 524 aaKnown RBP19.6■□□□□ 0.73
VPS33A-206ENST00000542310 SSC5DA1L4H1 1573 aa19.6■□□□□ 0.73
VPS33A-206ENST00000542310 F8W031 263 aaPredicted RBP19.59■□□□□ 0.73
VPS33A-206ENST00000542310 MOB2Q70IA6 237 aa19.59■□□□□ 0.73
VPS33A-206ENST00000542310 FBXO33Q7Z6M2 555 aa19.59■□□□□ 0.73
VPS33A-206ENST00000542310 CSRNP1Q96S65 589 aa19.59■□□□□ 0.73
VPS33A-206ENST00000542310 DEFB129Q9H1M3 183 aa19.59■□□□□ 0.73
VPS33A-206ENST00000542310 SERPINA10Q9UK55 444 aa19.59■□□□□ 0.73
VPS33A-206ENST00000542310 OTOFQ9HC10 1997 aa19.59■□□□□ 0.73
VPS33A-206ENST00000542310 UBE2Q2LH0YL09 131 aa19.58■□□□□ 0.72
VPS33A-206ENST00000542310 MAP3K11Q16584 847 aa19.58■□□□□ 0.72
VPS33A-206ENST00000542310 CAVIN4Q5BKX8 364 aa19.58■□□□□ 0.72
VPS33A-206ENST00000542310 VPS37DQ86XT2 251 aa19.58■□□□□ 0.72
VPS33A-206ENST00000542310 TBC1D22AQ8WUA7 517 aa19.58■□□□□ 0.72
VPS33A-206ENST00000542310 RNF186Q9NXI6 227 aa19.58■□□□□ 0.72
VPS33A-206ENST00000542310 FBXO3Q9UK99 471 aa19.58■□□□□ 0.72
VPS33A-206ENST00000542310 HDAC5Q9UQL6 1122 aa19.58■□□□□ 0.72
VPS33A-206ENST00000542310 JAG2Q9Y219 1238 aa19.58■□□□□ 0.72
VPS33A-206ENST00000542310 UBTFL1P0CB47 393 aaPredicted RBP19.57■□□□□ 0.72
VPS33A-206ENST00000542310 RFX5P48382 616 aaPredicted RBP19.57■□□□□ 0.72
VPS33A-206ENST00000542310 PUM3Q15397 648 aaKnown RBP19.57■□□□□ 0.72
VPS33A-206ENST00000542310 UNCXA6NJT0 531 aa19.56■□□□□ 0.72
VPS33A-206ENST00000542310 EYA2O00167 538 aa19.56■□□□□ 0.72
VPS33A-206ENST00000542310 TNFAIP1Q13829 316 aa19.56■□□□□ 0.72
VPS33A-206ENST00000542310 LDLRAD1Q5T700 205 aa19.56■□□□□ 0.72
VPS33A-206ENST00000542310 PRMT6Q96LA8 375 aaPredicted RBP19.56■□□□□ 0.72
VPS33A-206ENST00000542310 NOB1Q9ULX3 412 aaKnown RBP19.56■□□□□ 0.72
VPS33A-206ENST00000542310 TTF2Q9UNY4 1162 aaKnown RBP19.56■□□□□ 0.72
VPS33A-206ENST00000542310 PCDHAC2Q9Y5I4 1007 aa19.56■□□□□ 0.72
VPS33A-206ENST00000542310 IFIT1P09914 478 aaKnown RBP19.55■□□□□ 0.72
VPS33A-206ENST00000542310 FGFR2P21802 821 aa19.55■□□□□ 0.72
VPS33A-206ENST00000542310 RARSP54136 660 aaKnown RBP19.55■□□□□ 0.72
VPS33A-206ENST00000542310 PTPN12Q05209 780 aaKnown RBP19.55■□□□□ 0.72
VPS33A-206ENST00000542310 SPDYE2Q495Y8 402 aa19.55■□□□□ 0.72
VPS33A-206ENST00000542310 KLHDC4Q8TBB5 520 aa19.55■□□□□ 0.72
VPS33A-206ENST00000542310 ARHGAP45Q92619 1136 aa19.55■□□□□ 0.72
VPS33A-206ENST00000542310 CLRN2A0PK11 232 aa19.54■□□□□ 0.72
VPS33A-206ENST00000542310 PPP1R12BO60237 982 aaPredicted RBP19.54■□□□□ 0.72
VPS33A-206ENST00000542310 TRPA1O75762 1119 aa19.54■□□□□ 0.72
VPS33A-206ENST00000542310 RBM5P52756 815 aaKnown RBP eCLIP19.54■□□□□ 0.72
VPS33A-206ENST00000542310 HDLBPQ00341 1268 aaKnown RBP19.54■□□□□ 0.72
VPS33A-206ENST00000542310 SREBF2Q12772 1141 aa19.54■□□□□ 0.72
VPS33A-206ENST00000542310 SUPT20HL1Q3ZLR7 823 aa19.54■□□□□ 0.72
VPS33A-206ENST00000542310 MCOLN1Q9GZU1 580 aa19.54■□□□□ 0.72
VPS33A-206ENST00000542310 VEZTQ9HBM0 779 aa19.54■□□□□ 0.72
VPS33A-206ENST00000542310 ANGEL1Q9UNK9 670 aaKnown RBP19.54■□□□□ 0.72
VPS33A-206ENST00000542310 SUGT1Q9Y2Z0 365 aa19.54■□□□□ 0.72
VPS33A-206ENST00000542310 MAST3O60307 1309 aa19.53■□□□□ 0.72
VPS33A-206ENST00000542310 CIAO1O76071 339 aa19.53■□□□□ 0.72
VPS33A-206ENST00000542310 CRKP46108 304 aa19.53■□□□□ 0.72
VPS33A-206ENST00000542310 TM4SF4P48230 202 aa19.53■□□□□ 0.72
VPS33A-206ENST00000542310 LPIN2Q92539 896 aa19.53■□□□□ 0.72
VPS33A-206ENST00000542310 AOX1Q06278 1338 aa19.52■□□□□ 0.72
VPS33A-206ENST00000542310 FRAT2O75474 233 aaPredicted RBP19.52■□□□□ 0.72
VPS33A-206ENST00000542310 SLC5A1P13866 664 aa19.52■□□□□ 0.72
VPS33A-206ENST00000542310 DZIP1LQ8IYY4 767 aaKnown RBP19.52■□□□□ 0.72
VPS33A-206ENST00000542310 ZBTB48P10074 688 aaPredicted RBP19.51■□□□□ 0.71
VPS33A-206ENST00000542310 DGKZQ13574 1117 aa19.51■□□□□ 0.71
VPS33A-206ENST00000542310 RASA3Q14644 834 aa19.51■□□□□ 0.71
VPS33A-206ENST00000542310 NOM1Q5C9Z4 860 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms