RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 CSRNP1Q96S65 589 aa12.24□□□□□ -0.45
CHD4-207ENST00000537634 RNF186Q9NXI6 227 aa12.24□□□□□ -0.45
CHD4-207ENST00000537634 IL1R1P14778 569 aa12.23□□□□□ -0.45
CHD4-207ENST00000537634 CERS5Q8N5B7 392 aa12.23□□□□□ -0.45
CHD4-207ENST00000537634 ZBED3Q96IU2 234 aaPredicted RBP12.23□□□□□ -0.45
CHD4-207ENST00000537634 F8W031 263 aaPredicted RBP12.22□□□□□ -0.45
CHD4-207ENST00000537634 MYO1BO43795 1136 aa12.22□□□□□ -0.45
CHD4-207ENST00000537634 ARMC9Q7Z3E5 817 aa12.22□□□□□ -0.45
CHD4-207ENST00000537634 SUCLG2Q96I99 432 aa12.22□□□□□ -0.45
CHD4-207ENST00000537634 ARAP2Q8WZ64 1704 aa12.21□□□□□ -0.45
CHD4-207ENST00000537634 E9PSI1 815 aa12.21□□□□□ -0.45
CHD4-207ENST00000537634 NBPF7P0C2Y1 421 aaPredicted RBP12.21□□□□□ -0.45
CHD4-207ENST00000537634 FKBP1AP62942 108 aaKnown RBP12.21□□□□□ -0.45
CHD4-207ENST00000537634 PRKG1Q13976 671 aa12.21□□□□□ -0.45
CHD4-207ENST00000537634 MTMR14Q8NCE2 650 aa12.21□□□□□ -0.45
CHD4-207ENST00000537634 JAG2Q9Y219 1238 aa12.21□□□□□ -0.45
CHD4-207ENST00000537634 UTYO14607 1347 aa12.2□□□□□ -0.46
CHD4-207ENST00000537634 PTPRCP08575 1304 aa12.2□□□□□ -0.46
CHD4-207ENST00000537634 RBM5P52756 815 aaKnown RBP eCLIP12.2□□□□□ -0.46
CHD4-207ENST00000537634 UBE4AQ14139 1066 aa12.2□□□□□ -0.46
CHD4-207ENST00000537634 CFAP100Q494V2 611 aa12.2□□□□□ -0.46
CHD4-207ENST00000537634 MRPL50Q8N5N7 158 aaKnown RBP12.2□□□□□ -0.46
CHD4-207ENST00000537634 DEFB129Q9H1M3 183 aa12.2□□□□□ -0.46
CHD4-207ENST00000537634 BICC1Q9H694 974 aaKnown RBP12.2□□□□□ -0.46
CHD4-207ENST00000537634 PPP2R3BQ9Y5P8 575 aa12.2□□□□□ -0.46
CHD4-207ENST00000537634 MROH5Q6ZUA9 1318 aa12.19□□□□□ -0.46
CHD4-207ENST00000537634 CLRN2A0PK11 232 aa12.19□□□□□ -0.46
CHD4-207ENST00000537634 SPDYE2BA6NHP3 402 aa12.19□□□□□ -0.46
CHD4-207ENST00000537634 SPDYE6P0CI01 402 aa12.19□□□□□ -0.46
CHD4-207ENST00000537634 HIBADHP31937 336 aaKnown RBP12.19□□□□□ -0.46
CHD4-207ENST00000537634 PTPN12Q05209 780 aaKnown RBP12.19□□□□□ -0.46
CHD4-207ENST00000537634 SREBF2Q12772 1141 aa12.19□□□□□ -0.46
CHD4-207ENST00000537634 MKRN3Q13064 507 aaKnown RBP12.19□□□□□ -0.46
CHD4-207ENST00000537634 MFSD14BQ5SR56 506 aa12.19□□□□□ -0.46
CHD4-207ENST00000537634 KAZALD1Q96I82 304 aa12.19□□□□□ -0.46
CHD4-207ENST00000537634 PUS3Q9BZE2 481 aaKnown RBP12.19□□□□□ -0.46
CHD4-207ENST00000537634 VEZTQ9HBM0 779 aa12.19□□□□□ -0.46
CHD4-207ENST00000537634 ANGEL1Q9UNK9 670 aaKnown RBP12.19□□□□□ -0.46
CHD4-207ENST00000537634 PCDHAC2Q9Y5I4 1007 aa12.19□□□□□ -0.46
CHD4-207ENST00000537634 FAM205AQ6ZU69 1335 aa12.18□□□□□ -0.46
CHD4-207ENST00000537634 GYG1P46976 350 aa12.18□□□□□ -0.46
CHD4-207ENST00000537634 MLLT1Q03111 559 aaPredicted RBP12.18□□□□□ -0.46
CHD4-207ENST00000537634 RABL6Q3YEC7 729 aaPredicted RBP12.18□□□□□ -0.46
CHD4-207ENST00000537634 CTU1Q7Z7A3 348 aaKnown RBP12.18□□□□□ -0.46
CHD4-207ENST00000537634 VPS37DQ86XT2 251 aa12.18□□□□□ -0.46
CHD4-207ENST00000537634 TDRD7Q8NHU6 1098 aaKnown RBP12.18□□□□□ -0.46
CHD4-207ENST00000537634 SSH1Q8WYL5 1049 aa12.18□□□□□ -0.46
CHD4-207ENST00000537634 SSC5DA1L4H1 1573 aa12.18□□□□□ -0.46
CHD4-207ENST00000537634 PPP1R12BO60237 982 aaPredicted RBP12.17□□□□□ -0.46
CHD4-207ENST00000537634 TM4SF4P48230 202 aa12.17□□□□□ -0.46
CHD4-207ENST00000537634 SUPT20HL1Q3ZLR7 823 aa12.17□□□□□ -0.46
CHD4-207ENST00000537634 METTL24Q5JXM2 366 aa12.17□□□□□ -0.46
CHD4-207ENST00000537634 LDLRAD1Q5T700 205 aa12.17□□□□□ -0.46
CHD4-207ENST00000537634 ANKRD44Q8N8A2 993 aa12.17□□□□□ -0.46
CHD4-207ENST00000537634 FAM84BQ96KN1 310 aaPredicted RBP12.17□□□□□ -0.46
CHD4-207ENST00000537634 PRMT6Q96LA8 375 aaPredicted RBP12.17□□□□□ -0.46
CHD4-207ENST00000537634 TTF2Q9UNY4 1162 aaKnown RBP12.17□□□□□ -0.46
CHD4-207ENST00000537634 RIPOR2Q9Y4F9 1068 aa12.17□□□□□ -0.46
CHD4-207ENST00000537634 FRAT2O75474 233 aaPredicted RBP12.16□□□□□ -0.46
CHD4-207ENST00000537634 TBC1D8O95759 1140 aa12.16□□□□□ -0.46
CHD4-207ENST00000537634 RGS19P49795 217 aa12.16□□□□□ -0.46
CHD4-207ENST00000537634 SLFN5Q08AF3 891 aa12.16□□□□□ -0.46
CHD4-207ENST00000537634 TNFAIP1Q13829 316 aa12.16□□□□□ -0.46
CHD4-207ENST00000537634 MAP3K11Q16584 847 aa12.16□□□□□ -0.46
CHD4-207ENST00000537634 LRRC24Q50LG9 513 aa12.16□□□□□ -0.46
CHD4-207ENST00000537634 CAVIN4Q5BKX8 364 aa12.16□□□□□ -0.46
CHD4-207ENST00000537634 SPRYD7Q5W111 196 aa12.16□□□□□ -0.46
CHD4-207ENST00000537634 SLC10A4Q96EP9 437 aa12.16□□□□□ -0.46
CHD4-207ENST00000537634 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.16□□□□□ -0.46
CHD4-207ENST00000537634 SERPINA10Q9UK55 444 aa12.16□□□□□ -0.46
CHD4-207ENST00000537634 FZD1Q9UP38 647 aa12.16□□□□□ -0.46
CHD4-207ENST00000537634 AOX1Q06278 1338 aa12.15□□□□□ -0.46
CHD4-207ENST00000537634 IREB2P48200 963 aaKnown RBP12.15□□□□□ -0.46
CHD4-207ENST00000537634 RASA3Q14644 834 aa12.15□□□□□ -0.46
CHD4-207ENST00000537634 ALDH1L2Q3SY69 923 aa12.15□□□□□ -0.46
CHD4-207ENST00000537634 SPDYE2Q495Y8 402 aa12.15□□□□□ -0.46
CHD4-207ENST00000537634 ZNF296Q8WUU4 475 aaPredicted RBP12.15□□□□□ -0.46
CHD4-207ENST00000537634 USP44Q9H0E7 712 aa12.15□□□□□ -0.46
CHD4-207ENST00000537634 SMC4Q9NTJ3 1288 aa12.15□□□□□ -0.46
CHD4-207ENST00000537634 IQSEC3Q9UPP2 1182 aaPredicted RBP12.15□□□□□ -0.46
CHD4-207ENST00000537634 LAMB1P07942 1786 aa12.15□□□□□ -0.46
CHD4-207ENST00000537634 OTOFQ9HC10 1997 aa12.14□□□□□ -0.47
CHD4-207ENST00000537634 MYH13Q9UKX3 1938 aa12.14□□□□□ -0.47
CHD4-207ENST00000537634 MANSC4A6NHS7 340 aaPredicted RBP12.14□□□□□ -0.47
CHD4-207ENST00000537634 UNCXA6NJT0 531 aa12.14□□□□□ -0.47
CHD4-207ENST00000537634 GPR25O00155 361 aa12.14□□□□□ -0.47
CHD4-207ENST00000537634 PDE8BO95263 885 aa12.14□□□□□ -0.47
CHD4-207ENST00000537634 ALDH1A1P00352 501 aa12.14□□□□□ -0.47
CHD4-207ENST00000537634 ZBTB48P10074 688 aaPredicted RBP12.14□□□□□ -0.47
CHD4-207ENST00000537634 CHAF1AQ13111 956 aaPredicted RBP12.14□□□□□ -0.47
CHD4-207ENST00000537634 NOM1Q5C9Z4 860 aaKnown RBP12.14□□□□□ -0.47
CHD4-207ENST00000537634 NBPF12Q5TAG4 269 aaPredicted RBP12.14□□□□□ -0.47
CHD4-207ENST00000537634 FBXO33Q7Z6M2 555 aa12.14□□□□□ -0.47
CHD4-207ENST00000537634 KLHDC4Q8TBB5 520 aa12.14□□□□□ -0.47
CHD4-207ENST00000537634 TBC1D22AQ8WUA7 517 aa12.14□□□□□ -0.47
CHD4-207ENST00000537634 CLMNQ96JQ2 1002 aa12.14□□□□□ -0.47
CHD4-207ENST00000537634 TDRD3Q9H7E2 651 aaKnown RBP12.14□□□□□ -0.47
CHD4-207ENST00000537634 ZNF70Q9UC06 446 aaPredicted RBP12.14□□□□□ -0.47
CHD4-207ENST00000537634 IFIT1P09914 478 aaKnown RBP12.13□□□□□ -0.47
CHD4-207ENST00000537634 CRKP46108 304 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms