RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 PRR16Q569H4 304 aa13.29□□□□□ -0.28
POLR1B-216ENST00000537335 IGSF22Q8N9C0 903 aa13.29□□□□□ -0.28
POLR1B-216ENST00000537335 TCP11Q8WWU5 503 aa13.29□□□□□ -0.28
POLR1B-216ENST00000537335 BRF1Q92994 677 aa13.29□□□□□ -0.28
POLR1B-216ENST00000537335 EVI5LQ96CN4 794 aa13.29□□□□□ -0.28
POLR1B-216ENST00000537335 BOLA2Q9H3K6 86 aa13.29□□□□□ -0.28
POLR1B-216ENST00000537335 KLHL14Q9P2G3 628 aa13.29□□□□□ -0.28
POLR1B-216ENST00000537335 PYCARDQ9ULZ3 195 aa13.29□□□□□ -0.28
POLR1B-216ENST00000537335 ANKRD36BQ8N2N9 1353 aa13.29□□□□□ -0.28
POLR1B-216ENST00000537335 FLIIQ13045 1269 aa13.29□□□□□ -0.28
POLR1B-216ENST00000537335 SDCCAG8Q86SQ7 713 aaPredicted RBP13.29□□□□□ -0.28
POLR1B-216ENST00000537335 SYTL4Q96C24 671 aaPredicted RBP13.29□□□□□ -0.28
POLR1B-216ENST00000537335 YIPF3Q9GZM5 350 aa13.29□□□□□ -0.28
POLR1B-216ENST00000537335 Q9H521 79 aa13.29□□□□□ -0.28
POLR1B-216ENST00000537335 ZC4H2Q9NQZ6 224 aa13.29□□□□□ -0.28
POLR1B-216ENST00000537335 SATB2Q9UPW6 733 aa13.29□□□□□ -0.28
POLR1B-216ENST00000537335 AFMP43652 599 aa13.28□□□□□ -0.28
POLR1B-216ENST00000537335 TRIM14Q14142 442 aa13.28□□□□□ -0.28
POLR1B-216ENST00000537335 CYP26C1Q6V0L0 522 aa13.28□□□□□ -0.28
POLR1B-216ENST00000537335 MMRN2Q9H8L6 949 aa13.28□□□□□ -0.28
POLR1B-216ENST00000537335 XAB2Q9HCS7 855 aaKnown RBP13.28□□□□□ -0.28
POLR1B-216ENST00000537335 PLCB1Q9NQ66 1216 aa13.28□□□□□ -0.28
POLR1B-216ENST00000537335 GOLGA8AA7E2F4 631 aa13.28□□□□□ -0.28
POLR1B-216ENST00000537335 LRRC43Q8N309 656 aa13.28□□□□□ -0.28
POLR1B-216ENST00000537335 STRN4Q9NRL3 753 aa13.28□□□□□ -0.28
POLR1B-216ENST00000537335 TCP11L1Q9NUJ3 509 aa13.28□□□□□ -0.28
POLR1B-216ENST00000537335 MTUS1Q9ULD2 1270 aa13.28□□□□□ -0.28
POLR1B-216ENST00000537335 FCHSD2O94868 740 aa13.27□□□□□ -0.28
POLR1B-216ENST00000537335 SEC31AO94979 1220 aaKnown RBP13.27□□□□□ -0.28
POLR1B-216ENST00000537335 ATL3Q6DD88 541 aa13.27□□□□□ -0.28
POLR1B-216ENST00000537335 SAMD1Q6SPF0 538 aaPredicted RBP13.27□□□□□ -0.28
POLR1B-216ENST00000537335 TMTC1Q8IUR5 882 aa13.27□□□□□ -0.28
POLR1B-216ENST00000537335 PNMA6AP0CW24 399 aaPredicted RBP13.27□□□□□ -0.29
POLR1B-216ENST00000537335 ATP2B2Q01814 1243 aa13.27□□□□□ -0.29
POLR1B-216ENST00000537335 APBA1Q02410 837 aa13.27□□□□□ -0.29
POLR1B-216ENST00000537335 SF3A3Q12874 501 aaKnown RBP eCLIP13.27□□□□□ -0.292e-7■■■■■ 27.2
POLR1B-216ENST00000537335 PSMD2Q13200 908 aa13.27□□□□□ -0.29
POLR1B-216ENST00000537335 ANKRD24Q8TF21 1146 aa13.27□□□□□ -0.29
POLR1B-216ENST00000537335 UBA5Q9GZZ9 404 aa13.27□□□□□ -0.29
POLR1B-216ENST00000537335 SLC12A7Q9Y666 1083 aa13.27□□□□□ -0.29
POLR1B-216ENST00000537335 RNF8O76064 485 aa13.27□□□□□ -0.29
POLR1B-216ENST00000537335 BMP15O95972 392 aa13.27□□□□□ -0.29
POLR1B-216ENST00000537335 PDCD2Q16342 344 aaPredicted RBP13.27□□□□□ -0.29
POLR1B-216ENST00000537335 ANKRD20A3Q5VUR7 823 aa13.27□□□□□ -0.29
POLR1B-216ENST00000537335 SPDL1Q96EA4 605 aa13.27□□□□□ -0.29
POLR1B-216ENST00000537335 SAMM50Q9Y512 469 aa13.27□□□□□ -0.29
POLR1B-216ENST00000537335 MYOM3Q5VTT5 1437 aa13.27□□□□□ -0.29
POLR1B-216ENST00000537335 CCHCR1Q8TD31 782 aa13.27□□□□□ -0.29
POLR1B-216ENST00000537335 USP6NLQ92738 828 aa13.27□□□□□ -0.29
POLR1B-216ENST00000537335 SESN3P58005 492 aa13.26□□□□□ -0.29
POLR1B-216ENST00000537335 MAP3K21Q5TCX8 1036 aa13.26□□□□□ -0.29
POLR1B-216ENST00000537335 ARMC9Q7Z3E5 817 aa13.26□□□□□ -0.29
POLR1B-216ENST00000537335 CCDC151A5D8V7 595 aa13.26□□□□□ -0.29
POLR1B-216ENST00000537335 PSDA5PKW4 1024 aaPredicted RBP13.26□□□□□ -0.29
POLR1B-216ENST00000537335 CLCN6P51797 869 aa13.26□□□□□ -0.29
POLR1B-216ENST00000537335 TMEM266Q2M3C6 531 aa13.26□□□□□ -0.29
POLR1B-216ENST00000537335 FAM212AQ96EL1 285 aa13.26□□□□□ -0.29
POLR1B-216ENST00000537335 BICC1Q9H694 974 aaKnown RBP13.26□□□□□ -0.29
POLR1B-216ENST00000537335 EXOC1Q9NV70 894 aa13.26□□□□□ -0.29
POLR1B-216ENST00000537335 MARCKSP29966 332 aaPredicted RBP13.26□□□□□ -0.29
POLR1B-216ENST00000537335 ECHDC1Q9NTX5 307 aa13.26□□□□□ -0.29
POLR1B-216ENST00000537335 NOP53Q9NZM5 478 aaKnown RBP13.26□□□□□ -0.29
POLR1B-216ENST00000537335 SMARCA4P51532 1647 aa13.26□□□□□ -0.29
POLR1B-216ENST00000537335 MGEA5O60502 916 aa13.25□□□□□ -0.29
POLR1B-216ENST00000537335 SKIP12755 728 aa13.25□□□□□ -0.29
POLR1B-216ENST00000537335 VPS41P49754 854 aa13.25□□□□□ -0.29
POLR1B-216ENST00000537335 LRRC8AQ8IWT6 810 aa13.25□□□□□ -0.29
POLR1B-216ENST00000537335 CALML4Q96GE6 196 aa13.25□□□□□ -0.29
POLR1B-216ENST00000537335 CEP126Q9P2H0 1117 aa13.25□□□□□ -0.29
POLR1B-216ENST00000537335 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.25□□□□□ -0.29
POLR1B-216ENST00000537335 CCDC194A0A1B0GVG4 234 aa13.25□□□□□ -0.29
POLR1B-216ENST00000537335 STX17P56962 302 aa13.25□□□□□ -0.29
POLR1B-216ENST00000537335 CFAP157Q5JU67 520 aa13.25□□□□□ -0.29
POLR1B-216ENST00000537335 FBXO38Q6PIJ6 1188 aa13.25□□□□□ -0.29
POLR1B-216ENST00000537335 CCDC82Q8N4S0 544 aa13.25□□□□□ -0.29
POLR1B-216ENST00000537335 UTP11Q9Y3A2 253 aaKnown RBP13.25□□□□□ -0.29
POLR1B-216ENST00000537335 TRPC3Q13507 836 aa13.25□□□□□ -0.29
POLR1B-216ENST00000537335 NFE2L2Q16236 605 aa13.25□□□□□ -0.29
POLR1B-216ENST00000537335 FBXO41Q8TF61 875 aa13.25□□□□□ -0.29
POLR1B-216ENST00000537335 USP26Q9BXU7 913 aa13.25□□□□□ -0.29
POLR1B-216ENST00000537335 PAIP2BQ9ULR5 123 aaKnown RBP13.25□□□□□ -0.29
POLR1B-216ENST00000537335 ERBINQ96RT1 1412 aa13.25□□□□□ -0.29
POLR1B-216ENST00000537335 ERICH3Q5RHP9 1530 aa13.25□□□□□ -0.29
POLR1B-216ENST00000537335 PPARDQ03181 441 aa13.25□□□□□ -0.29
POLR1B-216ENST00000537335 TMCO4Q5TGY1 634 aa13.25□□□□□ -0.29
POLR1B-216ENST00000537335 CAPRIN2Q6IMN6 1127 aaKnown RBP13.25□□□□□ -0.29
POLR1B-216ENST00000537335 ADAM21Q9UKJ8 722 aa13.25□□□□□ -0.29
POLR1B-216ENST00000537335 GADD45BO75293 160 aaPredicted RBP13.24□□□□□ -0.29
POLR1B-216ENST00000537335 AK2P54819 239 aa13.24□□□□□ -0.29
POLR1B-216ENST00000537335 CCDC197Q8NCU1 140 aa13.24□□□□□ -0.29
POLR1B-216ENST00000537335 CABP2Q9NPB3 220 aa13.24□□□□□ -0.29
POLR1B-216ENST00000537335 HOMER3Q9NSC5 361 aa13.24□□□□□ -0.29
POLR1B-216ENST00000537335 PDS5BQ9NTI5 1447 aa13.24□□□□□ -0.29
POLR1B-216ENST00000537335 BCAP29Q9UHQ4 241 aa13.24□□□□□ -0.29
POLR1B-216ENST00000537335 SAR1BQ9Y6B6 198 aa13.24□□□□□ -0.29
POLR1B-216ENST00000537335 SCINQ9Y6U3 715 aa13.24□□□□□ -0.29
POLR1B-216ENST00000537335 MLECQ14165 292 aa13.24□□□□□ -0.29
POLR1B-216ENST00000537335 HIBCHQ6NVY1 386 aaPredicted RBP13.24□□□□□ -0.29
POLR1B-216ENST00000537335 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.24□□□□□ -0.29
POLR1B-216ENST00000537335 ZNF213O14771 459 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms