RNA–Protein interactions for RNA: ENST00000535410.1

KNTC1-208, Transcript of kinetochore associated 1, humanhuman

TSL 1 (best)

Gene KNTC1, Length 331 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-208ENST00000535410 RGMBQ6NW40 437 aa14.84□□□□□ -0.03
KNTC1-208ENST00000535410 APOBEC3FQ8IUX4 373 aaKnown RBP14.84□□□□□ -0.03
KNTC1-208ENST00000535410 TNS4Q8IZW8 715 aa14.84□□□□□ -0.03
KNTC1-208ENST00000535410 MXD3Q9BW11 206 aa14.84□□□□□ -0.03
KNTC1-208ENST00000535410 TRPM7Q96QT4 1865 aa14.84□□□□□ -0.03
KNTC1-208ENST00000535410 SCN9AQ15858 1988 aa14.84□□□□□ -0.03
KNTC1-208ENST00000535410 SNAP23O00161 211 aa14.83□□□□□ -0.04
KNTC1-208ENST00000535410 FOXN1O15353 648 aa14.83□□□□□ -0.04
KNTC1-208ENST00000535410 HNRNPUQ00839 825 aaKnown RBP eCLIP14.83□□□□□ -0.04
KNTC1-208ENST00000535410 NBPF9Q3BBW0 867 aa14.83□□□□□ -0.04
KNTC1-208ENST00000535410 REM2Q8IYK8 340 aaPredicted RBP14.83□□□□□ -0.04
KNTC1-208ENST00000535410 MTMR14Q8NCE2 650 aa14.83□□□□□ -0.04
KNTC1-208ENST00000535410 TDRD7Q8NHU6 1098 aaKnown RBP14.83□□□□□ -0.04
KNTC1-208ENST00000535410 PUS3Q9BZE2 481 aaKnown RBP14.83□□□□□ -0.04
KNTC1-208ENST00000535410 FAM205AQ6ZU69 1335 aa14.83□□□□□ -0.04
KNTC1-208ENST00000535410 IRS2Q9Y4H2 1338 aa14.83□□□□□ -0.04
KNTC1-208ENST00000535410 EYA2O00167 538 aa14.82□□□□□ -0.04
KNTC1-208ENST00000535410 ZNF157P51786 506 aaPredicted RBP14.82□□□□□ -0.04
KNTC1-208ENST00000535410 PUM3Q15397 648 aaKnown RBP14.82□□□□□ -0.04
KNTC1-208ENST00000535410 INTS3Q68E01 1043 aaKnown RBP14.82□□□□□ -0.04
KNTC1-208ENST00000535410 TBC1D22AQ8WUA7 517 aa14.82□□□□□ -0.04
KNTC1-208ENST00000535410 FAM84BQ96KN1 310 aaPredicted RBP14.82□□□□□ -0.04
KNTC1-208ENST00000535410 SPEF2Q9C093 1822 aa14.82□□□□□ -0.04
KNTC1-208ENST00000535410 GYG1P46976 350 aa14.81□□□□□ -0.04
KNTC1-208ENST00000535410 LRRC24Q50LG9 513 aa14.81□□□□□ -0.04
KNTC1-208ENST00000535410 MFSD14BQ5SR56 506 aa14.81□□□□□ -0.04
KNTC1-208ENST00000535410 ASTN2O75129 1339 aaPredicted RBP14.81□□□□□ -0.04
KNTC1-208ENST00000535410 CIAO1O76071 339 aa14.8□□□□□ -0.04
KNTC1-208ENST00000535410 SLC5A1P13866 664 aa14.8□□□□□ -0.04
KNTC1-208ENST00000535410 RBM5P52756 815 aaKnown RBP eCLIP14.8□□□□□ -0.04
KNTC1-208ENST00000535410 TTLL12Q14166 644 aaPredicted RBP14.8□□□□□ -0.04
KNTC1-208ENST00000535410 FBXO33Q7Z6M2 555 aa14.8□□□□□ -0.04
KNTC1-208ENST00000535410 LPIN2Q92539 896 aa14.8□□□□□ -0.04
KNTC1-208ENST00000535410 CEP126Q9P2H0 1117 aa14.8□□□□□ -0.04
KNTC1-208ENST00000535410 PPP2R3BQ9Y5P8 575 aa14.8□□□□□ -0.04
KNTC1-208ENST00000535410 PCNTO95613 3336 aa14.8□□□□□ -0.04
KNTC1-208ENST00000535410 PSME4Q14997 1843 aa14.8□□□□□ -0.04
KNTC1-208ENST00000535410 F8W031 263 aaPredicted RBP14.79□□□□□ -0.04
KNTC1-208ENST00000535410 AOC2O75106 756 aa14.79□□□□□ -0.04
KNTC1-208ENST00000535410 LBX1P52954 281 aa14.79□□□□□ -0.04
KNTC1-208ENST00000535410 PTPN12Q05209 780 aaKnown RBP14.79□□□□□ -0.04
KNTC1-208ENST00000535410 CFAP100Q494V2 611 aa14.79□□□□□ -0.04
KNTC1-208ENST00000535410 ATF7IPQ6VMQ6 1270 aa14.79□□□□□ -0.04
KNTC1-208ENST00000535410 ARMC9Q7Z3E5 817 aa14.79□□□□□ -0.04
KNTC1-208ENST00000535410 CERS5Q8N5B7 392 aa14.79□□□□□ -0.04
KNTC1-208ENST00000535410 FRAT1Q92837 279 aaPredicted RBP14.79□□□□□ -0.04
KNTC1-208ENST00000535410 ZBED3Q96IU2 234 aaPredicted RBP14.79□□□□□ -0.04
KNTC1-208ENST00000535410 GNL3LQ9NVN8 582 aaKnown RBP14.79□□□□□ -0.04
KNTC1-208ENST00000535410 SERPINA10Q9UK55 444 aa14.79□□□□□ -0.04
KNTC1-208ENST00000535410 SPDYE2BA6NHP3 402 aa14.78□□□□□ -0.04
KNTC1-208ENST00000535410 SPDYE6P0CI01 402 aa14.78□□□□□ -0.04
KNTC1-208ENST00000535410 IL15P40933 162 aaPredicted RBP14.78□□□□□ -0.04
KNTC1-208ENST00000535410 RFX5P48382 616 aaPredicted RBP14.78□□□□□ -0.04
KNTC1-208ENST00000535410 TNFAIP1Q13829 316 aa14.78□□□□□ -0.04
KNTC1-208ENST00000535410 SUPT20HL1Q3ZLR7 823 aa14.78□□□□□ -0.04
KNTC1-208ENST00000535410 DLK2Q6UY11 383 aa14.78□□□□□ -0.04
KNTC1-208ENST00000535410 VGLL2Q8N8G2 317 aa14.78□□□□□ -0.04
KNTC1-208ENST00000535410 KLHDC4Q8TBB5 520 aa14.78□□□□□ -0.04
KNTC1-208ENST00000535410 TTF2Q9UNY4 1162 aaKnown RBP14.78□□□□□ -0.04
KNTC1-208ENST00000535410 SUGT1Q9Y2Z0 365 aa14.78□□□□□ -0.04
KNTC1-208ENST00000535410 LRRFIP2Q9Y608 721 aaKnown RBP14.78□□□□□ -0.04
KNTC1-208ENST00000535410 MAST3O60307 1309 aa14.77□□□□□ -0.04
KNTC1-208ENST00000535410 PPP1R12BO60237 982 aaPredicted RBP14.77□□□□□ -0.05
KNTC1-208ENST00000535410 HSPA8P11142 646 aaKnown RBP14.77□□□□□ -0.05
KNTC1-208ENST00000535410 HDLBPQ00341 1268 aaKnown RBP14.77□□□□□ -0.05
KNTC1-208ENST00000535410 ZKSCAN2Q63HK3 967 aa14.77□□□□□ -0.05
KNTC1-208ENST00000535410 MRIQ9BWK5 157 aa14.77□□□□□ -0.05
KNTC1-208ENST00000535410 DEFB129Q9H1M3 183 aa14.77□□□□□ -0.05
KNTC1-208ENST00000535410 COL1A1P02452 1464 aaPredicted RBP14.76□□□□□ -0.05
KNTC1-208ENST00000535410 UNCXA6NJT0 531 aa14.76□□□□□ -0.05
KNTC1-208ENST00000535410 GNAI2P04899 355 aa14.76□□□□□ -0.05
KNTC1-208ENST00000535410 SLC10A3P09131 477 aa14.76□□□□□ -0.05
KNTC1-208ENST00000535410 FGFR2P21802 821 aa14.76□□□□□ -0.05
KNTC1-208ENST00000535410 WDR66Q8TBY9 1149 aa14.76□□□□□ -0.05
KNTC1-208ENST00000535410 COPRSQ9NQ92 184 aa14.76□□□□□ -0.05
KNTC1-208ENST00000535410 JAG2Q9Y219 1238 aa14.76□□□□□ -0.05
KNTC1-208ENST00000535410 POLR2AP24928 1970 aaKnown RBP14.75□□□□□ -0.05
KNTC1-208ENST00000535410 FAM155AB1AL88 458 aaPredicted RBP14.75□□□□□ -0.05
KNTC1-208ENST00000535410 BCAR3O75815 825 aa14.75□□□□□ -0.05
KNTC1-208ENST00000535410 TRIM27P14373 513 aa14.75□□□□□ -0.05
KNTC1-208ENST00000535410 TNNI2P48788 182 aa14.75□□□□□ -0.05
KNTC1-208ENST00000535410 BCAMP50895 628 aa14.75□□□□□ -0.05
KNTC1-208ENST00000535410 KIF23Q02241 960 aaPredicted RBP14.75□□□□□ -0.05
KNTC1-208ENST00000535410 CHAF1AQ13111 956 aaPredicted RBP14.75□□□□□ -0.05
KNTC1-208ENST00000535410 PRMT6Q96LA8 375 aaPredicted RBP14.75□□□□□ -0.05
KNTC1-208ENST00000535410 MEIS3Q99687 375 aa14.75□□□□□ -0.05
KNTC1-208ENST00000535410 SIL1Q9H173 461 aa14.75□□□□□ -0.05
KNTC1-208ENST00000535410 VEZTQ9HBM0 779 aa14.75□□□□□ -0.05
KNTC1-208ENST00000535410 SAGE1Q9NXZ1 904 aa14.75□□□□□ -0.05
KNTC1-208ENST00000535410 AKAP2Q9Y2D5 859 aa14.75□□□□□ -0.05
KNTC1-208ENST00000535410 ZBED9Q6R2W3 1325 aa14.74□□□□□ -0.05
KNTC1-208ENST00000535410 UBE2Q2LH0YL09 131 aa14.74□□□□□ -0.05
KNTC1-208ENST00000535410 SEMA3EO15041 775 aa14.74□□□□□ -0.05
KNTC1-208ENST00000535410 SRGAP3O43295 1099 aa14.74□□□□□ -0.05
KNTC1-208ENST00000535410 MTX1Q13505 466 aa14.74□□□□□ -0.05
KNTC1-208ENST00000535410 ATP2B3Q16720 1220 aa14.74□□□□□ -0.05
KNTC1-208ENST00000535410 PRAMEF18Q5VWM3 479 aa14.74□□□□□ -0.05
KNTC1-208ENST00000535410 ATG9AQ7Z3C6 839 aa14.74□□□□□ -0.05
KNTC1-208ENST00000535410 FTSJ3Q8IY81 847 aaKnown RBP14.74□□□□□ -0.05
KNTC1-208ENST00000535410 TEKT1Q969V4 418 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms