RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 ANAPC15P60006 121 aa24.43■■□□□ 1.5
TNFRSF1A-205ENST00000534885 RABEP1Q15276 862 aa24.43■■□□□ 1.5
TNFRSF1A-205ENST00000534885 APPBP2Q92624 585 aa24.43■■□□□ 1.5
TNFRSF1A-205ENST00000534885 CD2BP2O95400 341 aaKnown RBP24.42■■□□□ 1.5
TNFRSF1A-205ENST00000534885 ATP2B4P23634 1241 aa24.42■■□□□ 1.5
TNFRSF1A-205ENST00000534885 BECN1Q14457 450 aa24.42■■□□□ 1.5
TNFRSF1A-205ENST00000534885 POLLQ9UGP5 575 aa24.42■■□□□ 1.5
TNFRSF1A-205ENST00000534885 C10orf71Q711Q0 1435 aa24.42■■□□□ 1.5
TNFRSF1A-205ENST00000534885 PDE6AP16499 860 aa24.42■■□□□ 1.5
TNFRSF1A-205ENST00000534885 ZSCAN25Q6NSZ9 544 aa24.42■■□□□ 1.5
TNFRSF1A-205ENST00000534885 PUS7LQ9H0K6 701 aaKnown RBP24.42■■□□□ 1.5
TNFRSF1A-205ENST00000534885 DENND2AQ9ULE3 1009 aa24.42■■□□□ 1.5
TNFRSF1A-205ENST00000534885 FRAT2O75474 233 aaPredicted RBP24.41■■□□□ 1.5
TNFRSF1A-205ENST00000534885 ZBTB7AO95365 584 aa24.41■■□□□ 1.5
TNFRSF1A-205ENST00000534885 NECTIN1Q15223 517 aa24.41■■□□□ 1.5
TNFRSF1A-205ENST00000534885 VPS53Q5VIR6 699 aa24.41■■□□□ 1.5
TNFRSF1A-205ENST00000534885 PRPF40BQ6NWY9 871 aaKnown RBP24.41■■□□□ 1.5
TNFRSF1A-205ENST00000534885 RASEFQ8IZ41 740 aa24.41■■□□□ 1.5
TNFRSF1A-205ENST00000534885 TBC1D16Q8TBP0 767 aa24.41■■□□□ 1.5
TNFRSF1A-205ENST00000534885 SLX4Q8IY92 1834 aa24.41■■□□□ 1.5
TNFRSF1A-205ENST00000534885 ZNF532Q9HCE3 1301 aa24.41■■□□□ 1.5
TNFRSF1A-205ENST00000534885 SEMA3EO15041 775 aa24.41■■□□□ 1.5
TNFRSF1A-205ENST00000534885 STYK1Q6J9G0 422 aa24.41■■□□□ 1.5
TNFRSF1A-205ENST00000534885 C15orf52Q6ZUT6 534 aaKnown RBP24.41■■□□□ 1.5
TNFRSF1A-205ENST00000534885 DAXXQ9UER7 740 aaPredicted RBP24.41■■□□□ 1.5
TNFRSF1A-205ENST00000534885 SNX14Q9Y5W7 946 aa24.41■■□□□ 1.5
TNFRSF1A-205ENST00000534885 TCRBV5S4A2TA0A5A2 114 aa24.4■■□□□ 1.5
TNFRSF1A-205ENST00000534885 MAP3K12Q12852 859 aa24.4■■□□□ 1.5
TNFRSF1A-205ENST00000534885 IL17RAQ96F46 866 aa24.4■■□□□ 1.5
TNFRSF1A-205ENST00000534885 ABCF2Q9UG63 623 aa24.4■■□□□ 1.5
TNFRSF1A-205ENST00000534885 R3HDM1Q15032 1099 aaKnown RBP24.39■■□□□ 1.5
TNFRSF1A-205ENST00000534885 UBE3CQ15386 1083 aa24.39■■□□□ 1.5
TNFRSF1A-205ENST00000534885 DUOX1Q9NRD9 1551 aa24.39■■□□□ 1.49
TNFRSF1A-205ENST00000534885 MAGEB6Q8N7X4 407 aa24.39■■□□□ 1.49
TNFRSF1A-205ENST00000534885 SNX21Q969T3 373 aa24.39■■□□□ 1.49
TNFRSF1A-205ENST00000534885 LRP2BPQ9P2M1 347 aa24.39■■□□□ 1.49
TNFRSF1A-205ENST00000534885 CREB3L3Q68CJ9 461 aa24.38■■□□□ 1.49
TNFRSF1A-205ENST00000534885 C6orf229H3BNL8 230 aa24.38■■□□□ 1.49
TNFRSF1A-205ENST00000534885 ZNF804AQ7Z570 1209 aa24.38■■□□□ 1.49
TNFRSF1A-205ENST00000534885 CHAF1AQ13111 956 aaPredicted RBP24.37■■□□□ 1.49
TNFRSF1A-205ENST00000534885 JAG2Q9Y219 1238 aa24.37■■□□□ 1.49
TNFRSF1A-205ENST00000534885 ATF5Q9Y2D1 282 aaPredicted RBP24.37■■□□□ 1.49
TNFRSF1A-205ENST00000534885 PDS5AQ29RF7 1337 aaKnown RBP24.37■■□□□ 1.49
TNFRSF1A-205ENST00000534885 SLC27A2O14975 620 aa24.36■■□□□ 1.49
TNFRSF1A-205ENST00000534885 GPAA1O43292 621 aa24.36■■□□□ 1.49
TNFRSF1A-205ENST00000534885 HSPD1P10809 573 aaKnown RBP24.36■■□□□ 1.49
TNFRSF1A-205ENST00000534885 HSCBQ8IWL3 235 aa24.36■■□□□ 1.49
TNFRSF1A-205ENST00000534885 MPNDQ8N594 471 aa24.36■■□□□ 1.49
TNFRSF1A-205ENST00000534885 KCNB2Q92953 911 aa24.36■■□□□ 1.49
TNFRSF1A-205ENST00000534885 TDRD7Q8NHU6 1098 aaKnown RBP24.36■■□□□ 1.49
TNFRSF1A-205ENST00000534885 DSCC1Q9BVC3 393 aa24.36■■□□□ 1.49
TNFRSF1A-205ENST00000534885 FOXP2O15409 715 aa24.35■■□□□ 1.49
TNFRSF1A-205ENST00000534885 UPF3BQ9BZI7 483 aaKnown RBP24.35■■□□□ 1.49
TNFRSF1A-205ENST00000534885 TAF6LQ9Y6J9 622 aa24.35■■□□□ 1.49
TNFRSF1A-205ENST00000534885 DLEC1Q9Y238 1755 aa24.35■■□□□ 1.49
TNFRSF1A-205ENST00000534885 NEK4P51957 841 aa24.34■■□□□ 1.49
TNFRSF1A-205ENST00000534885 CNKSR1Q969H4 720 aa24.34■■□□□ 1.49
TNFRSF1A-205ENST00000534885 MTFR1LQ9H019 292 aa24.34■■□□□ 1.49
TNFRSF1A-205ENST00000534885 RAI14Q9P0K7 980 aa24.34■■□□□ 1.49
TNFRSF1A-205ENST00000534885 U3KPZ7 1027 aaPredicted RBP24.34■■□□□ 1.49
TNFRSF1A-205ENST00000534885 KIF13BQ9NQT8 1826 aa24.34■■□□□ 1.49
TNFRSF1A-205ENST00000534885 ZBTB22O15209 634 aa24.34■■□□□ 1.49
TNFRSF1A-205ENST00000534885 ADCK5Q3MIX3 580 aa24.34■■□□□ 1.49
TNFRSF1A-205ENST00000534885 DPP8Q6V1X1 898 aaPredicted RBP24.34■■□□□ 1.49
TNFRSF1A-205ENST00000534885 CD209Q9NNX6 404 aa24.34■■□□□ 1.49
TNFRSF1A-205ENST00000534885 TMX4Q9H1E5 349 aaPredicted RBP24.33■■□□□ 1.49
TNFRSF1A-205ENST00000534885 ZNF219Q9P2Y4 722 aaPredicted RBP24.33■■□□□ 1.49
TNFRSF1A-205ENST00000534885 ZKSCAN1P17029 563 aaPredicted RBP24.33■■□□□ 1.48
TNFRSF1A-205ENST00000534885 RNF20Q5VTR2 975 aa24.32■■□□□ 1.48
TNFRSF1A-205ENST00000534885 ZNF384Q8TF68 577 aa24.32■■□□□ 1.48
TNFRSF1A-205ENST00000534885 RIMBP2O15034 1052 aa24.31■■□□□ 1.48
TNFRSF1A-205ENST00000534885 ST18O60284 1047 aa24.31■■□□□ 1.48
TNFRSF1A-205ENST00000534885 PRDX5P30044 214 aa24.31■■□□□ 1.48
TNFRSF1A-205ENST00000534885 ADGRA1Q86SQ6 560 aa24.31■■□□□ 1.48
TNFRSF1A-205ENST00000534885 PSDA5PKW4 1024 aaPredicted RBP24.31■■□□□ 1.48
TNFRSF1A-205ENST00000534885 IL1R1P14778 569 aa24.31■■□□□ 1.48
TNFRSF1A-205ENST00000534885 C7orf43Q8WVR3 580 aa24.31■■□□□ 1.48
TNFRSF1A-205ENST00000534885 AIDAQ96BJ3 306 aa24.31■■□□□ 1.48
TNFRSF1A-205ENST00000534885 CHD4Q14839 1912 aa24.3■■□□□ 1.48
TNFRSF1A-205ENST00000534885 A0A0G2JLW4 131 aa24.3■■□□□ 1.48
TNFRSF1A-205ENST00000534885 CYP21A2P08686 494 aa24.3■■□□□ 1.48
TNFRSF1A-205ENST00000534885 CYP7A1P22680 504 aa24.3■■□□□ 1.48
TNFRSF1A-205ENST00000534885 K7ELQ4 463 aaPredicted RBP24.3■■□□□ 1.48
TNFRSF1A-205ENST00000534885 MBD4O95243 580 aa24.3■■□□□ 1.48
TNFRSF1A-205ENST00000534885 ERICH6Q7L0X2 663 aa24.3■■□□□ 1.48
TNFRSF1A-205ENST00000534885 JAKMIP1Q96N16 626 aaKnown RBP24.3■■□□□ 1.48
TNFRSF1A-205ENST00000534885 CCDC88AQ3V6T2 1871 aa24.29■■□□□ 1.48
TNFRSF1A-205ENST00000534885 CPA1P15085 419 aa24.29■■□□□ 1.48
TNFRSF1A-205ENST00000534885 DPEP1P16444 411 aa24.29■■□□□ 1.48
TNFRSF1A-205ENST00000534885 CASTP20810 708 aaKnown RBP24.29■■□□□ 1.48
TNFRSF1A-205ENST00000534885 KCNA3P22001 575 aa24.29■■□□□ 1.48
TNFRSF1A-205ENST00000534885 COL9A3Q14050 684 aaPredicted RBP24.29■■□□□ 1.48
TNFRSF1A-205ENST00000534885 MIGA1Q8NAN2 632 aa24.29■■□□□ 1.48
TNFRSF1A-205ENST00000534885 STRBPQ96SI9 672 aaKnown RBP24.29■■□□□ 1.48
TNFRSF1A-205ENST00000534885 POLD1P28340 1107 aa24.28■■□□□ 1.48
TNFRSF1A-205ENST00000534885 MECOMQ03112 1051 aa24.28■■□□□ 1.48
TNFRSF1A-205ENST00000534885 TTLL5Q6EMB2 1281 aa24.28■■□□□ 1.48
TNFRSF1A-205ENST00000534885 SPRYD3Q8NCJ5 442 aa24.28■■□□□ 1.48
TNFRSF1A-205ENST00000534885 WDR66Q8TBY9 1149 aa24.28■■□□□ 1.48
TNFRSF1A-205ENST00000534885 NSUN4Q96CB9 384 aaKnown RBP24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms