RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 RSBN1LQ6PCB5 846 aaPredicted RBP26.19■■□□□ 1.78
CAPN1-220ENST00000530567 CERS5Q8N5B7 392 aa26.19■■□□□ 1.78
CAPN1-220ENST00000530567 GMLQ99445 158 aa26.19■■□□□ 1.78
CAPN1-220ENST00000530567 POTECB2RU33 542 aa26.18■■□□□ 1.78
CAPN1-220ENST00000530567 GORABQ5T7V8 394 aa26.18■■□□□ 1.78
CAPN1-220ENST00000530567 FBXW7Q969H0 707 aa26.18■■□□□ 1.78
CAPN1-220ENST00000530567 GNL3LQ9NVN8 582 aaKnown RBP26.18■■□□□ 1.78
CAPN1-220ENST00000530567 SEMA3EO15041 775 aa26.17■■□□□ 1.78
CAPN1-220ENST00000530567 SCARF1Q14162 830 aa26.17■■□□□ 1.78
CAPN1-220ENST00000530567 BCL11AQ9H165 835 aa26.17■■□□□ 1.78
CAPN1-220ENST00000530567 AKAP11Q9UKA4 1901 aa26.17■■□□□ 1.78
CAPN1-220ENST00000530567 IFIT2P09913 472 aaKnown RBP26.16■■□□□ 1.78
CAPN1-220ENST00000530567 CHAF1AQ13111 956 aaPredicted RBP26.16■■□□□ 1.78
CAPN1-220ENST00000530567 ZNF784Q8NCA9 323 aaPredicted RBP26.16■■□□□ 1.78
CAPN1-220ENST00000530567 NMRK2Q9NPI5 230 aa26.16■■□□□ 1.78
CAPN1-220ENST00000530567 SCN4AP35499 1836 aa26.16■■□□□ 1.78
CAPN1-220ENST00000530567 FRAT2O75474 233 aaPredicted RBP26.15■■□□□ 1.78
CAPN1-220ENST00000530567 RPS12P25398 132 aaKnown RBP26.15■■□□□ 1.78
CAPN1-220ENST00000530567 FKBP1AP62942 108 aaKnown RBP26.15■■□□□ 1.78
CAPN1-220ENST00000530567 ANKRD45Q5TZF3 282 aa26.15■■□□□ 1.78
CAPN1-220ENST00000530567 AGBL3Q8NEM8 1001 aa26.15■■□□□ 1.78
CAPN1-220ENST00000530567 ZNF512BQ96KM6 892 aaPredicted RBP26.15■■□□□ 1.78
CAPN1-220ENST00000530567 PDS5AQ29RF7 1337 aaKnown RBP26.15■■□□□ 1.78
CAPN1-220ENST00000530567 SHTN1A0MZ66 631 aa26.14■■□□□ 1.78
CAPN1-220ENST00000530567 MCAMP43121 646 aa26.14■■□□□ 1.78
CAPN1-220ENST00000530567 CCDC158Q5M9N0 1113 aa26.14■■□□□ 1.78
CAPN1-220ENST00000530567 PI16Q6UXB8 463 aa26.14■■□□□ 1.78
CAPN1-220ENST00000530567 DPF2Q92785 391 aa26.14■■□□□ 1.78
CAPN1-220ENST00000530567 GPRC5DQ9NZD1 345 aa26.14■■□□□ 1.78
CAPN1-220ENST00000530567 HMG20BQ9P0W2 317 aa26.14■■□□□ 1.78
CAPN1-220ENST00000530567 DENND2AQ9ULE3 1009 aa26.14■■□□□ 1.78
CAPN1-220ENST00000530567 MYO3BQ8WXR4 1341 aa26.14■■□□□ 1.77
CAPN1-220ENST00000530567 UQCRFS1P1P0C7P4 283 aa26.14■■□□□ 1.77
CAPN1-220ENST00000530567 MFSD14BQ5SR56 506 aa26.14■■□□□ 1.77
CAPN1-220ENST00000530567 TTC39AQ5SRH9 613 aa26.14■■□□□ 1.77
CAPN1-220ENST00000530567 GRIK5Q16478 980 aa26.13■■□□□ 1.77
CAPN1-220ENST00000530567 C16orf71Q8IYS4 520 aaPredicted RBP26.13■■□□□ 1.77
CAPN1-220ENST00000530567 OTUD7AQ8TE49 926 aaPredicted RBP26.13■■□□□ 1.77
CAPN1-220ENST00000530567 RRAGCQ9HB90 399 aa26.13■■□□□ 1.77
CAPN1-220ENST00000530567 EPS15P42566 896 aa26.12■■□□□ 1.77
CAPN1-220ENST00000530567 NUCB1Q02818 461 aa26.12■■□□□ 1.77
CAPN1-220ENST00000530567 B4GALNT3Q6L9W6 998 aa26.12■■□□□ 1.77
CAPN1-220ENST00000530567 GPBP1L1Q9HC44 474 aaPredicted RBP26.12■■□□□ 1.77
CAPN1-220ENST00000530567 SALL3Q9BXA9 1300 aa26.11■■□□□ 1.77
CAPN1-220ENST00000530567 MICALL2Q8IY33 904 aa26.11■■□□□ 1.77
CAPN1-220ENST00000530567 SPATA5Q8NB90 893 aa26.11■■□□□ 1.77
CAPN1-220ENST00000530567 WDR66Q8TBY9 1149 aa26.11■■□□□ 1.77
CAPN1-220ENST00000530567 TBC1D22AQ8WUA7 517 aa26.11■■□□□ 1.77
CAPN1-220ENST00000530567 SALL1Q9NSC2 1324 aa26.1■■□□□ 1.77
CAPN1-220ENST00000530567 ERICH6BQ5W0A0 696 aa26.1■■□□□ 1.77
CAPN1-220ENST00000530567 LNPKQ9C0E8 428 aa26.1■■□□□ 1.77
CAPN1-220ENST00000530567 CNOT7Q9UIV1 285 aaKnown RBP26.1■■□□□ 1.77
CAPN1-220ENST00000530567 HACL1Q9UJ83 578 aa26.1■■□□□ 1.77
CAPN1-220ENST00000530567 IQCA1LA6NCM1 817 aa26.09■■□□□ 1.77
CAPN1-220ENST00000530567 VEGFAP15692 232 aaPredicted RBP26.09■■□□□ 1.77
CAPN1-220ENST00000530567 ZNF280AP59817 542 aaPredicted RBP26.09■■□□□ 1.77
CAPN1-220ENST00000530567 KIAA0825Q8IV33 1275 aa26.09■■□□□ 1.77
CAPN1-220ENST00000530567 TAF1DQ9H5J8 278 aaPredicted RBP26.09■■□□□ 1.77
CAPN1-220ENST00000530567 USP17L8P0C7I0 530 aa26.08■■□□□ 1.77
CAPN1-220ENST00000530567 LMOD1P29536 600 aaPredicted RBP26.08■■□□□ 1.77
CAPN1-220ENST00000530567 CHD1LQ86WJ1 897 aa26.08■■□□□ 1.77
CAPN1-220ENST00000530567 SNRKQ9NRH2 765 aa26.08■■□□□ 1.77
CAPN1-220ENST00000530567 KIF3CO14782 793 aa26.07■■□□□ 1.76
CAPN1-220ENST00000530567 EPHX2P34913 555 aa26.07■■□□□ 1.76
CAPN1-220ENST00000530567 PPIL4Q8WUA2 492 aaKnown RBP eCLIP26.07■■□□□ 1.76
CAPN1-220ENST00000530567 EGFRP00533 1210 aa26.06■■□□□ 1.76
CAPN1-220ENST00000530567 ATP5JP18859 108 aa26.06■■□□□ 1.76
CAPN1-220ENST00000530567 ZAP70P43403 619 aa26.06■■□□□ 1.76
CAPN1-220ENST00000530567 TSHZ3Q63HK5 1081 aa26.06■■□□□ 1.76
CAPN1-220ENST00000530567 ECHDC1Q9NTX5 307 aa26.06■■□□□ 1.76
CAPN1-220ENST00000530567 NDUFB9Q9Y6M9 179 aa26.06■■□□□ 1.76
CAPN1-220ENST00000530567 ADAMTSL1Q8N6G6 1762 aa26.06■■□□□ 1.76
CAPN1-220ENST00000530567 F8W031 263 aaPredicted RBP26.05■■□□□ 1.76
CAPN1-220ENST00000530567 PRDX5P30044 214 aa26.05■■□□□ 1.76
CAPN1-220ENST00000530567 TRPM4Q8TD43 1214 aa26.05■■□□□ 1.76
CAPN1-220ENST00000530567 ADARB2Q9NS39 739 aaKnown RBP26.05■■□□□ 1.76
CAPN1-220ENST00000530567 ZBTB47Q9UFB7 747 aaPredicted RBP26.05■■□□□ 1.76
CAPN1-220ENST00000530567 SUGT1Q9Y2Z0 365 aa26.05■■□□□ 1.76
CAPN1-220ENST00000530567 CYP2E1P05181 493 aaPredicted RBP26.05■■□□□ 1.76
CAPN1-220ENST00000530567 TBC1D9Q6ZT07 1266 aa26.05■■□□□ 1.76
CAPN1-220ENST00000530567 H7C1D1 291 aa26.04■■□□□ 1.76
CAPN1-220ENST00000530567 MX1P20591 662 aa26.04■■□□□ 1.76
CAPN1-220ENST00000530567 SAMD7Q7Z3H4 446 aa26.04■■□□□ 1.76
CAPN1-220ENST00000530567 CCDC136Q96JN2 1154 aa26.04■■□□□ 1.76
CAPN1-220ENST00000530567 TTF2Q9UNY4 1162 aaKnown RBP26.04■■□□□ 1.76
CAPN1-220ENST00000530567 MYO5AQ9Y4I1 1855 aaKnown RBP26.03■■□□□ 1.76
CAPN1-220ENST00000530567 HIRAP54198 1017 aaPredicted RBP26.03■■□□□ 1.76
CAPN1-220ENST00000530567 CENPQQ7L2Z9 268 aaPredicted RBP26.03■■□□□ 1.76
CAPN1-220ENST00000530567 BOLA2Q9H3K6 86 aa26.03■■□□□ 1.76
CAPN1-220ENST00000530567 TTC41PQ6P2S7 1318 aa26.03■■□□□ 1.76
CAPN1-220ENST00000530567 TBC1D10BQ4KMP7 808 aaPredicted RBP26.02■■□□□ 1.76
CAPN1-220ENST00000530567 OGFOD1Q8N543 542 aa26.02■■□□□ 1.76
CAPN1-220ENST00000530567 ZGPATQ8N5A5 531 aaKnown RBP26.02■■□□□ 1.76
CAPN1-220ENST00000530567 PI4K2BQ8TCG2 481 aa26.02■■□□□ 1.76
CAPN1-220ENST00000530567 GPATCH3Q96I76 525 aa26.02■■□□□ 1.76
CAPN1-220ENST00000530567 HAUS7Q99871 368 aa26.02■■□□□ 1.76
CAPN1-220ENST00000530567 ANTXR1Q9H6X2 564 aa26.02■■□□□ 1.76
CAPN1-220ENST00000530567 MYOZ2Q9NPC6 264 aa26.02■■□□□ 1.76
CAPN1-220ENST00000530567 PIH1D3Q9NQM4 214 aaKnown RBP26.02■■□□□ 1.76
CAPN1-220ENST00000530567 ABCF2Q9UG63 623 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms