RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 NF2P35240 595 aa21.97■■□□□ 1.11
DDX41-217ENST00000515562 CERS5Q8N5B7 392 aa21.97■■□□□ 1.11
DDX41-217ENST00000515562 PUS3Q9BZE2 481 aaKnown RBP21.97■■□□□ 1.11
DDX41-217ENST00000515562 USP44Q9H0E7 712 aa21.97■■□□□ 1.11
DDX41-217ENST00000515562 ARAP2Q8WZ64 1704 aa21.97■■□□□ 1.11
DDX41-217ENST00000515562 DLGAP5Q15398 846 aa21.96■■□□□ 1.11
DDX41-217ENST00000515562 ZBED3Q96IU2 234 aaPredicted RBP21.96■■□□□ 1.11
DDX41-217ENST00000515562 SCAF8Q9UPN6 1271 aaKnown RBP21.96■■□□□ 1.11
DDX41-217ENST00000515562 RIPOR2Q9Y4F9 1068 aa21.96■■□□□ 1.11
DDX41-217ENST00000515562 MTMR14Q8NCE2 650 aa21.95■■□□□ 1.1
DDX41-217ENST00000515562 TSKSQ9UJT2 592 aa21.95■■□□□ 1.1
DDX41-217ENST00000515562 HIBADHP31937 336 aaKnown RBP21.94■■□□□ 1.1
DDX41-217ENST00000515562 METTL24Q5JXM2 366 aa21.94■■□□□ 1.1
DDX41-217ENST00000515562 ZIC5Q96T25 663 aa21.94■■□□□ 1.1
DDX41-217ENST00000515562 FAM205AQ6ZU69 1335 aa21.94■■□□□ 1.1
DDX41-217ENST00000515562 MYO1BO43795 1136 aa21.93■■□□□ 1.1
DDX41-217ENST00000515562 GYG1P46976 350 aa21.93■■□□□ 1.1
DDX41-217ENST00000515562 RASAL3Q86YV0 1011 aa21.93■■□□□ 1.1
DDX41-217ENST00000515562 TDRD7Q8NHU6 1098 aaKnown RBP21.93■■□□□ 1.1
DDX41-217ENST00000515562 SAGE1Q9NXZ1 904 aa21.93■■□□□ 1.1
DDX41-217ENST00000515562 F8W031 263 aaPredicted RBP21.92■■□□□ 1.1
DDX41-217ENST00000515562 KIF23Q02241 960 aaPredicted RBP21.92■■□□□ 1.1
DDX41-217ENST00000515562 PRAMEF18Q5VWM3 479 aa21.92■■□□□ 1.1
DDX41-217ENST00000515562 REM2Q8IYK8 340 aaPredicted RBP21.92■■□□□ 1.1
DDX41-217ENST00000515562 FAM84BQ96KN1 310 aaPredicted RBP21.92■■□□□ 1.1
DDX41-217ENST00000515562 API5Q9BZZ5 524 aaKnown RBP21.92■■□□□ 1.1
DDX41-217ENST00000515562 JAG2Q9Y219 1238 aa21.92■■□□□ 1.1
DDX41-217ENST00000515562 PDE8BO95263 885 aa21.91■■□□□ 1.1
DDX41-217ENST00000515562 TTLL12Q14166 644 aaPredicted RBP21.91■■□□□ 1.1
DDX41-217ENST00000515562 CFAP100Q494V2 611 aa21.91■■□□□ 1.1
DDX41-217ENST00000515562 LRRC24Q50LG9 513 aa21.91■■□□□ 1.1
DDX41-217ENST00000515562 MFSD14BQ5SR56 506 aa21.91■■□□□ 1.1
DDX41-217ENST00000515562 VPS37DQ86XT2 251 aa21.91■■□□□ 1.1
DDX41-217ENST00000515562 PPP2R3BQ9Y5P8 575 aa21.91■■□□□ 1.1
DDX41-217ENST00000515562 KIF16BQ96L93 1317 aa21.9■■□□□ 1.1
DDX41-217ENST00000515562 SPDYE2BA6NHP3 402 aa21.9■■□□□ 1.1
DDX41-217ENST00000515562 UBTFL1P0CB47 393 aaPredicted RBP21.9■■□□□ 1.1
DDX41-217ENST00000515562 SPDYE6P0CI01 402 aa21.9■■□□□ 1.1
DDX41-217ENST00000515562 CAVIN4Q5BKX8 364 aa21.9■■□□□ 1.1
DDX41-217ENST00000515562 VGLL2Q8N8G2 317 aa21.9■■□□□ 1.1
DDX41-217ENST00000515562 NOB1Q9ULX3 412 aaKnown RBP21.9■■□□□ 1.1
DDX41-217ENST00000515562 AKAP11Q9UKA4 1901 aa21.9■■□□□ 1.1
DDX41-217ENST00000515562 MOB2Q70IA6 237 aa21.89■■□□□ 1.09
DDX41-217ENST00000515562 KLHDC4Q8TBB5 520 aa21.89■■□□□ 1.09
DDX41-217ENST00000515562 DEFB129Q9H1M3 183 aa21.89■■□□□ 1.09
DDX41-217ENST00000515562 HDAC5Q9UQL6 1122 aa21.89■■□□□ 1.09
DDX41-217ENST00000515562 UBE2Q2LH0YL09 131 aa21.88■■□□□ 1.09
DDX41-217ENST00000515562 PUM3Q15397 648 aaKnown RBP21.88■■□□□ 1.09
DDX41-217ENST00000515562 ARMC9Q7Z3E5 817 aa21.88■■□□□ 1.09
DDX41-217ENST00000515562 SERPINA10Q9UK55 444 aa21.88■■□□□ 1.09
DDX41-217ENST00000515562 RBM5P52756 815 aaKnown RBP eCLIP21.87■■□□□ 1.09
DDX41-217ENST00000515562 RARSP54136 660 aaKnown RBP21.87■■□□□ 1.09
DDX41-217ENST00000515562 FBXO33Q7Z6M2 555 aa21.87■■□□□ 1.09
DDX41-217ENST00000515562 CSRNP1Q96S65 589 aa21.87■■□□□ 1.09
DDX41-217ENST00000515562 TTF2Q9UNY4 1162 aaKnown RBP21.87■■□□□ 1.09
DDX41-217ENST00000515562 EYA2O00167 538 aa21.86■■□□□ 1.09
DDX41-217ENST00000515562 FRAT2O75474 233 aaPredicted RBP21.86■■□□□ 1.09
DDX41-217ENST00000515562 RFX5P48382 616 aaPredicted RBP21.86■■□□□ 1.09
DDX41-217ENST00000515562 TBC1D22AQ8WUA7 517 aa21.86■■□□□ 1.09
DDX41-217ENST00000515562 ABHD8Q96I13 439 aa21.86■■□□□ 1.09
DDX41-217ENST00000515562 PRMT6Q96LA8 375 aaPredicted RBP21.86■■□□□ 1.09
DDX41-217ENST00000515562 PCDHAC2Q9Y5I4 1007 aa21.86■■□□□ 1.09
DDX41-217ENST00000515562 CLRN2A0PK11 232 aa21.85■■□□□ 1.09
DDX41-217ENST00000515562 IFIT1P09914 478 aaKnown RBP21.85■■□□□ 1.09
DDX41-217ENST00000515562 ARHGAP45Q92619 1136 aa21.85■■□□□ 1.09
DDX41-217ENST00000515562 VEZTQ9HBM0 779 aa21.85■■□□□ 1.09
DDX41-217ENST00000515562 RNF186Q9NXI6 227 aa21.85■■□□□ 1.09
DDX41-217ENST00000515562 FBXO3Q9UK99 471 aa21.85■■□□□ 1.09
DDX41-217ENST00000515562 TRPA1O75762 1119 aa21.84■■□□□ 1.09
DDX41-217ENST00000515562 PTPN12Q05209 780 aaKnown RBP21.84■■□□□ 1.09
DDX41-217ENST00000515562 TNFAIP1Q13829 316 aa21.84■■□□□ 1.09
DDX41-217ENST00000515562 CASP8AP2Q9UKL3 1982 aa21.84■■□□□ 1.09
DDX41-217ENST00000515562 SSC5DA1L4H1 1573 aa21.83■■□□□ 1.09
DDX41-217ENST00000515562 SLC5A1P13866 664 aa21.83■■□□□ 1.09
DDX41-217ENST00000515562 FGFR2P21802 821 aa21.83■■□□□ 1.09
DDX41-217ENST00000515562 CHAF1AQ13111 956 aaPredicted RBP21.83■■□□□ 1.09
DDX41-217ENST00000515562 SUPT20HL1Q3ZLR7 823 aa21.83■■□□□ 1.09
DDX41-217ENST00000515562 ANGEL1Q9UNK9 670 aaKnown RBP21.83■■□□□ 1.09
DDX41-217ENST00000515562 IQSEC3Q9UPP2 1182 aaPredicted RBP21.83■■□□□ 1.09
DDX41-217ENST00000515562 PPP1R12BO60237 982 aaPredicted RBP21.82■■□□□ 1.08
DDX41-217ENST00000515562 CIAO1O76071 339 aa21.82■■□□□ 1.08
DDX41-217ENST00000515562 PRKG1Q13976 671 aa21.82■■□□□ 1.08
DDX41-217ENST00000515562 MAP3K11Q16584 847 aa21.82■■□□□ 1.08
DDX41-217ENST00000515562 SPDYE2Q495Y8 402 aa21.82■■□□□ 1.08
DDX41-217ENST00000515562 LDLRAD1Q5T700 205 aa21.82■■□□□ 1.08
DDX41-217ENST00000515562 LPIN2Q92539 896 aa21.82■■□□□ 1.08
DDX41-217ENST00000515562 MYH13Q9UKX3 1938 aa21.82■■□□□ 1.08
DDX41-217ENST00000515562 CRKP46108 304 aa21.81■■□□□ 1.08
DDX41-217ENST00000515562 BCAMP50895 628 aa21.81■■□□□ 1.08
DDX41-217ENST00000515562 LRRFIP2Q9Y608 721 aaKnown RBP21.81■■□□□ 1.08
DDX41-217ENST00000515562 MAST3O60307 1309 aa21.8■■□□□ 1.08
DDX41-217ENST00000515562 AOX1Q06278 1338 aa21.8■■□□□ 1.08
DDX41-217ENST00000515562 UNCXA6NJT0 531 aa21.8■■□□□ 1.08
DDX41-217ENST00000515562 IPO8O15397 1037 aaKnown RBP21.8■■□□□ 1.08
DDX41-217ENST00000515562 HDLBPQ00341 1268 aaKnown RBP21.8■■□□□ 1.08
DDX41-217ENST00000515562 SREBF2Q12772 1141 aa21.8■■□□□ 1.08
DDX41-217ENST00000515562 RASA3Q14644 834 aa21.8■■□□□ 1.08
DDX41-217ENST00000515562 INTS3Q68E01 1043 aaKnown RBP21.8■■□□□ 1.08
DDX41-217ENST00000515562 ATG9AQ7Z3C6 839 aa21.8■■□□□ 1.08
DDX41-217ENST00000515562 DZIP1LQ8IYY4 767 aaKnown RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms