RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 APOBEC3FQ8IUX4 373 aaKnown RBP9.16□□□□□ -0.94
HTT-212ENST00000513639 KIAA0825Q8IV33 1275 aa9.16□□□□□ -0.94
HTT-212ENST00000513639 MTMR14Q8NCE2 650 aa9.16□□□□□ -0.94
HTT-212ENST00000513639 SUCLG2Q96I99 432 aa9.16□□□□□ -0.94
HTT-212ENST00000513639 MXD3Q9BW11 206 aa9.16□□□□□ -0.94
HTT-212ENST00000513639 USP44Q9H0E7 712 aa9.16□□□□□ -0.94
HTT-212ENST00000513639 SMC4Q9NTJ3 1288 aa9.16□□□□□ -0.94
HTT-212ENST00000513639 RIPOR2Q9Y4F9 1068 aa9.16□□□□□ -0.94
HTT-212ENST00000513639 ASTN2O75129 1339 aaPredicted RBP9.15□□□□□ -0.94
HTT-212ENST00000513639 SNAP23O00161 211 aa9.15□□□□□ -0.94
HTT-212ENST00000513639 KLRK1P26718 216 aa9.15□□□□□ -0.94
HTT-212ENST00000513639 MKRN4PQ13434 485 aaPredicted RBP9.15□□□□□ -0.94
HTT-212ENST00000513639 TTLL12Q14166 644 aaPredicted RBP9.15□□□□□ -0.94
HTT-212ENST00000513639 SUPT20HL1Q3ZLR7 823 aa9.15□□□□□ -0.94
HTT-212ENST00000513639 CDCA7LQ96GN5 454 aa9.15□□□□□ -0.94
HTT-212ENST00000513639 KAZALD1Q96I82 304 aa9.15□□□□□ -0.94
HTT-212ENST00000513639 API5Q9BZZ5 524 aaKnown RBP9.15□□□□□ -0.94
HTT-212ENST00000513639 BICC1Q9H694 974 aaKnown RBP9.15□□□□□ -0.94
HTT-212ENST00000513639 COL4A1P02462 1669 aa9.14□□□□□ -0.95
HTT-212ENST00000513639 UNCXA6NJT0 531 aa9.14□□□□□ -0.95
HTT-212ENST00000513639 IPO8O15397 1037 aaKnown RBP9.14□□□□□ -0.95
HTT-212ENST00000513639 FRAT2O75474 233 aaPredicted RBP9.14□□□□□ -0.95
HTT-212ENST00000513639 PDE8BO95263 885 aa9.14□□□□□ -0.95
HTT-212ENST00000513639 KIF23Q02241 960 aaPredicted RBP9.14□□□□□ -0.95
HTT-212ENST00000513639 METTL24Q5JXM2 366 aa9.14□□□□□ -0.95
HTT-212ENST00000513639 ARMC9Q7Z3E5 817 aa9.14□□□□□ -0.95
HTT-212ENST00000513639 TDRD7Q8NHU6 1098 aaKnown RBP9.14□□□□□ -0.95
HTT-212ENST00000513639 ARHGAP45Q92619 1136 aa9.14□□□□□ -0.95
HTT-212ENST00000513639 FAM84BQ96KN1 310 aaPredicted RBP9.14□□□□□ -0.95
HTT-212ENST00000513639 PUS3Q9BZE2 481 aaKnown RBP9.14□□□□□ -0.95
HTT-212ENST00000513639 DEFB129Q9H1M3 183 aa9.14□□□□□ -0.95
HTT-212ENST00000513639 SAGE1Q9NXZ1 904 aa9.14□□□□□ -0.95
HTT-212ENST00000513639 NOB1Q9ULX3 412 aaKnown RBP9.14□□□□□ -0.95
HTT-212ENST00000513639 TRPM7Q96QT4 1865 aa9.13□□□□□ -0.95
HTT-212ENST00000513639 FAM205AQ6ZU69 1335 aa9.13□□□□□ -0.95
HTT-212ENST00000513639 IRS2Q9Y4H2 1338 aa9.13□□□□□ -0.95
HTT-212ENST00000513639 FAM155AB1AL88 458 aaPredicted RBP9.13□□□□□ -0.95
HTT-212ENST00000513639 UBE2Q2LH0YL09 131 aa9.13□□□□□ -0.95
HTT-212ENST00000513639 PPP1R12BO60237 982 aaPredicted RBP9.13□□□□□ -0.95
HTT-212ENST00000513639 SLC10A3P09131 477 aa9.13□□□□□ -0.95
HTT-212ENST00000513639 RBM5P52756 815 aaKnown RBP eCLIP9.13□□□□□ -0.95
HTT-212ENST00000513639 FBXO33Q7Z6M2 555 aa9.13□□□□□ -0.95
HTT-212ENST00000513639 ANKRD44Q8N8A2 993 aa9.13□□□□□ -0.95
HTT-212ENST00000513639 TBC1D22AQ8WUA7 517 aa9.13□□□□□ -0.95
HTT-212ENST00000513639 ZBED3Q96IU2 234 aaPredicted RBP9.13□□□□□ -0.95
HTT-212ENST00000513639 CSRNP1Q96S65 589 aa9.13□□□□□ -0.95
HTT-212ENST00000513639 MRIQ9BWK5 157 aa9.13□□□□□ -0.95
HTT-212ENST00000513639 RTN4Q9NQC3 1192 aaKnown RBP9.13□□□□□ -0.95
HTT-212ENST00000513639 SERPINA10Q9UK55 444 aa9.13□□□□□ -0.95
HTT-212ENST00000513639 FBXO3Q9UK99 471 aa9.13□□□□□ -0.95
HTT-212ENST00000513639 PPP2R3BQ9Y5P8 575 aa9.13□□□□□ -0.95
HTT-212ENST00000513639 SPDYE2BA6NHP3 402 aa9.12□□□□□ -0.95
HTT-212ENST00000513639 F8W031 263 aaPredicted RBP9.12□□□□□ -0.95
HTT-212ENST00000513639 TRPA1O75762 1119 aa9.12□□□□□ -0.95
HTT-212ENST00000513639 IFIT1P09914 478 aaKnown RBP9.12□□□□□ -0.95
HTT-212ENST00000513639 UBTFL1P0CB47 393 aaPredicted RBP9.12□□□□□ -0.95
HTT-212ENST00000513639 SPDYE6P0CI01 402 aa9.12□□□□□ -0.95
HTT-212ENST00000513639 GYG1P46976 350 aa9.12□□□□□ -0.95
HTT-212ENST00000513639 INHBEP58166 350 aa9.12□□□□□ -0.95
HTT-212ENST00000513639 TNFAIP1Q13829 316 aa9.12□□□□□ -0.95
HTT-212ENST00000513639 CFAP100Q494V2 611 aa9.12□□□□□ -0.95
HTT-212ENST00000513639 MFSD14BQ5SR56 506 aa9.12□□□□□ -0.95
HTT-212ENST00000513639 PRAMEF18Q5VWM3 479 aa9.12□□□□□ -0.95
HTT-212ENST00000513639 CERS5Q8N5B7 392 aa9.12□□□□□ -0.95
HTT-212ENST00000513639 SLC10A4Q96EP9 437 aa9.12□□□□□ -0.95
HTT-212ENST00000513639 PRMT6Q96LA8 375 aaPredicted RBP9.12□□□□□ -0.95
HTT-212ENST00000513639 POLR2AP24928 1970 aaKnown RBP9.12□□□□□ -0.95
HTT-212ENST00000513639 MYH3P11055 1940 aa9.11□□□□□ -0.95
HTT-212ENST00000513639 EYA2O00167 538 aa9.11□□□□□ -0.95
HTT-212ENST00000513639 GNAI3P08754 354 aa9.11□□□□□ -0.95
HTT-212ENST00000513639 TM4SF4P48230 202 aa9.11□□□□□ -0.95
HTT-212ENST00000513639 RARSP54136 660 aaKnown RBP9.11□□□□□ -0.95
HTT-212ENST00000513639 HDLBPQ00341 1268 aaKnown RBP9.11□□□□□ -0.95
HTT-212ENST00000513639 PUM3Q15397 648 aaKnown RBP9.11□□□□□ -0.95
HTT-212ENST00000513639 LRRC24Q50LG9 513 aa9.11□□□□□ -0.95
HTT-212ENST00000513639 LPIN2Q92539 896 aa9.11□□□□□ -0.95
HTT-212ENST00000513639 ZIC5Q96T25 663 aa9.11□□□□□ -0.95
HTT-212ENST00000513639 GNL3LQ9NVN8 582 aaKnown RBP9.11□□□□□ -0.95
HTT-212ENST00000513639 RNF186Q9NXI6 227 aa9.11□□□□□ -0.95
HTT-212ENST00000513639 CEP126Q9P2H0 1117 aa9.11□□□□□ -0.95
HTT-212ENST00000513639 TTF2Q9UNY4 1162 aaKnown RBP9.11□□□□□ -0.95
HTT-212ENST00000513639 SCAF8Q9UPN6 1271 aaKnown RBP9.11□□□□□ -0.95
HTT-212ENST00000513639 SUGT1Q9Y2Z0 365 aa9.11□□□□□ -0.95
HTT-212ENST00000513639 SCN9AQ15858 1988 aa9.11□□□□□ -0.95
HTT-212ENST00000513639 KIF16BQ96L93 1317 aa9.1□□□□□ -0.95
HTT-212ENST00000513639 CIAO1O76071 339 aa9.1□□□□□ -0.95
HTT-212ENST00000513639 SLC5A1P13866 664 aa9.1□□□□□ -0.95
HTT-212ENST00000513639 TNNI2P48788 182 aa9.1□□□□□ -0.95
HTT-212ENST00000513639 PTPN12Q05209 780 aaKnown RBP9.1□□□□□ -0.95
HTT-212ENST00000513639 SREBF2Q12772 1141 aa9.1□□□□□ -0.95
HTT-212ENST00000513639 LDLRAD1Q5T700 205 aa9.1□□□□□ -0.95
HTT-212ENST00000513639 RASAL3Q86YV0 1011 aa9.1□□□□□ -0.95
HTT-212ENST00000513639 ABHD8Q96I13 439 aa9.1□□□□□ -0.95
HTT-212ENST00000513639 VEZTQ9HBM0 779 aa9.1□□□□□ -0.95
HTT-212ENST00000513639 TSKSQ9UJT2 592 aa9.1□□□□□ -0.95
HTT-212ENST00000513639 ANGEL1Q9UNK9 670 aaKnown RBP9.1□□□□□ -0.95
HTT-212ENST00000513639 JAG2Q9Y219 1238 aa9.1□□□□□ -0.95
HTT-212ENST00000513639 ALDH1A1P00352 501 aa9.09□□□□□ -0.95
HTT-212ENST00000513639 IL15P40933 162 aaPredicted RBP9.09□□□□□ -0.95
HTT-212ENST00000513639 IREB2P48200 963 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms