RNA–Protein interactions for RNA: ENST00000509662.5

ATP2C1-217, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 4

Gene ATP2C1, Length 559 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-217ENST00000509662 FAM84BQ96KN1 310 aaPredicted RBP29.58■■■□□ 2.33
ATP2C1-217ENST00000509662 EYA2O00167 538 aa29.57■■■□□ 2.32
ATP2C1-217ENST00000509662 GYG1P46976 350 aa29.57■■■□□ 2.32
ATP2C1-217ENST00000509662 RFX5P48382 616 aaPredicted RBP29.57■■■□□ 2.32
ATP2C1-217ENST00000509662 CAVIN4Q5BKX8 364 aa29.57■■■□□ 2.32
ATP2C1-217ENST00000509662 C2orf69Q8N8R5 385 aa29.57■■■□□ 2.32
ATP2C1-217ENST00000509662 HHIPL1Q96JK4 782 aa29.57■■■□□ 2.32
ATP2C1-217ENST00000509662 PTPN12Q05209 780 aaKnown RBP29.56■■■□□ 2.32
ATP2C1-217ENST00000509662 NBPF9Q3BBW0 867 aa29.56■■■□□ 2.32
ATP2C1-217ENST00000509662 TDRD7Q8NHU6 1098 aaKnown RBP29.56■■■□□ 2.32
ATP2C1-217ENST00000509662 CAPNS2Q96L46 248 aa29.56■■■□□ 2.32
ATP2C1-217ENST00000509662 FBXO3Q9UK99 471 aa29.56■■■□□ 2.32
ATP2C1-217ENST00000509662 ZNF646O15015 1829 aaPredicted RBP29.55■■■□□ 2.32
ATP2C1-217ENST00000509662 WNT10BO00744 389 aa29.55■■■□□ 2.32
ATP2C1-217ENST00000509662 DLK2Q6UY11 383 aa29.55■■■□□ 2.32
ATP2C1-217ENST00000509662 GNAI2P04899 355 aa29.54■■■□□ 2.32
ATP2C1-217ENST00000509662 GRM1Q13255 1194 aa29.54■■■□□ 2.32
ATP2C1-217ENST00000509662 CYP4F22Q6NT55 531 aa29.54■■■□□ 2.32
ATP2C1-217ENST00000509662 CERS5Q8N5B7 392 aa29.54■■■□□ 2.32
ATP2C1-217ENST00000509662 VGLL2Q8N8G2 317 aa29.54■■■□□ 2.32
ATP2C1-217ENST00000509662 GBA2Q9HCG7 927 aaPredicted RBP29.54■■■□□ 2.32
ATP2C1-217ENST00000509662 FAM205AQ6ZU69 1335 aa29.53■■■□□ 2.32
ATP2C1-217ENST00000509662 ZBTB7BO15156 539 aaPredicted RBP29.53■■■□□ 2.32
ATP2C1-217ENST00000509662 IFIT1P09914 478 aaKnown RBP29.53■■■□□ 2.32
ATP2C1-217ENST00000509662 MTX1Q13505 466 aa29.53■■■□□ 2.32
ATP2C1-217ENST00000509662 PUM3Q15397 648 aaKnown RBP29.53■■■□□ 2.32
ATP2C1-217ENST00000509662 FBXO33Q7Z6M2 555 aa29.53■■■□□ 2.32
ATP2C1-217ENST00000509662 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.53■■■□□ 2.32
ATP2C1-217ENST00000509662 FRAT2O75474 233 aaPredicted RBP29.52■■■□□ 2.32
ATP2C1-217ENST00000509662 MAP2K1Q02750 393 aaPredicted RBP29.52■■■□□ 2.32
ATP2C1-217ENST00000509662 MVPQ14764 893 aaKnown RBP29.52■■■□□ 2.32
ATP2C1-217ENST00000509662 DLGAP5Q15398 846 aa29.52■■■□□ 2.32
ATP2C1-217ENST00000509662 AIDAQ96BJ3 306 aa29.52■■■□□ 2.32
ATP2C1-217ENST00000509662 CDCA5Q96FF9 252 aa29.52■■■□□ 2.32
ATP2C1-217ENST00000509662 PCNTO95613 3336 aa29.51■■■□□ 2.31
ATP2C1-217ENST00000509662 CIAO1O76071 339 aa29.51■■■□□ 2.31
ATP2C1-217ENST00000509662 HUNKP57058 714 aa29.51■■■□□ 2.31
ATP2C1-217ENST00000509662 C20orf194Q5TEA3 1177 aa29.51■■■□□ 2.31
ATP2C1-217ENST00000509662 JAG2Q9Y219 1238 aa29.51■■■□□ 2.31
ATP2C1-217ENST00000509662 F8W031 263 aaPredicted RBP29.5■■■□□ 2.31
ATP2C1-217ENST00000509662 PDE3AQ14432 1141 aa29.5■■■□□ 2.31
ATP2C1-217ENST00000509662 SIL1Q9H173 461 aa29.5■■■□□ 2.31
ATP2C1-217ENST00000509662 CEP126Q9P2H0 1117 aa29.5■■■□□ 2.31
ATP2C1-217ENST00000509662 SLC5A1P13866 664 aa29.49■■■□□ 2.31
ATP2C1-217ENST00000509662 MAP2K2P36507 400 aa29.49■■■□□ 2.31
ATP2C1-217ENST00000509662 MFSD14BQ5SR56 506 aa29.49■■■□□ 2.31
ATP2C1-217ENST00000509662 ATG9AQ7Z3C6 839 aa29.49■■■□□ 2.31
ATP2C1-217ENST00000509662 MTMR14Q8NCE2 650 aa29.49■■■□□ 2.31
ATP2C1-217ENST00000509662 COG6Q9Y2V7 657 aa29.49■■■□□ 2.31
ATP2C1-217ENST00000509662 FGFR2P21802 821 aa29.48■■■□□ 2.31
ATP2C1-217ENST00000509662 APOBEC3FQ8IUX4 373 aaKnown RBP29.48■■■□□ 2.31
ATP2C1-217ENST00000509662 LPIN2Q92539 896 aa29.48■■■□□ 2.31
ATP2C1-217ENST00000509662 ZBED3Q96IU2 234 aaPredicted RBP29.48■■■□□ 2.31
ATP2C1-217ENST00000509662 WBP1LQ9NX94 342 aa29.48■■■□□ 2.31
ATP2C1-217ENST00000509662 MYO1BO43795 1136 aa29.47■■■□□ 2.31
ATP2C1-217ENST00000509662 IL15P40933 162 aaPredicted RBP29.47■■■□□ 2.31
ATP2C1-217ENST00000509662 C1orf115Q9H7X2 142 aa29.47■■■□□ 2.31
ATP2C1-217ENST00000509662 COPRSQ9NQ92 184 aa29.47■■■□□ 2.31
ATP2C1-217ENST00000509662 SRGAP3O43295 1099 aa29.46■■■□□ 2.31
ATP2C1-217ENST00000509662 RRP1P56182 461 aaKnown RBP29.46■■■□□ 2.31
ATP2C1-217ENST00000509662 CFAP100Q494V2 611 aa29.46■■■□□ 2.31
ATP2C1-217ENST00000509662 TBC1D22AQ8WUA7 517 aa29.46■■■□□ 2.31
ATP2C1-217ENST00000509662 DDX19BQ9UMR2 479 aa29.46■■■□□ 2.31
ATP2C1-217ENST00000509662 NF2P35240 595 aa29.45■■■□□ 2.31
ATP2C1-217ENST00000509662 BCAMP50895 628 aa29.45■■■□□ 2.31
ATP2C1-217ENST00000509662 RBM5P52756 815 aaKnown RBP eCLIP29.45■■■□□ 2.31
ATP2C1-217ENST00000509662 FKBP1BP68106 108 aa29.45■■■□□ 2.31
ATP2C1-217ENST00000509662 BEGAINQ9BUH8 593 aa29.45■■■□□ 2.31
ATP2C1-217ENST00000509662 IQSEC3Q9UPP2 1182 aaPredicted RBP29.45■■■□□ 2.31
ATP2C1-217ENST00000509662 RGMBQ6NW40 437 aa29.44■■■□□ 2.3
ATP2C1-217ENST00000509662 TTF2Q9UNY4 1162 aaKnown RBP29.44■■■□□ 2.3
ATP2C1-217ENST00000509662 SCAF8Q9UPN6 1271 aaKnown RBP29.44■■■□□ 2.3
ATP2C1-217ENST00000509662 PA2G4Q9UQ80 394 aaKnown RBP29.44■■■□□ 2.3
ATP2C1-217ENST00000509662 PNMA6EA0A0J9YXQ4 647 aa29.43■■■□□ 2.3
ATP2C1-217ENST00000509662 CHAF1AQ13111 956 aaPredicted RBP29.43■■■□□ 2.3
ATP2C1-217ENST00000509662 ATP2B3Q16720 1220 aa29.43■■■□□ 2.3
ATP2C1-217ENST00000509662 CCDC102AQ96A19 550 aa29.43■■■□□ 2.3
ATP2C1-217ENST00000509662 SPDYE2BA6NHP3 402 aa29.42■■■□□ 2.3
ATP2C1-217ENST00000509662 FOXN1O15353 648 aa29.42■■■□□ 2.3
ATP2C1-217ENST00000509662 AOC2O75106 756 aa29.42■■■□□ 2.3
ATP2C1-217ENST00000509662 SPDYE6P0CI01 402 aa29.42■■■□□ 2.3
ATP2C1-217ENST00000509662 CTCFP49711 727 aaPredicted RBP29.42■■■□□ 2.3
ATP2C1-217ENST00000509662 NOGQ13253 232 aa29.42■■■□□ 2.3
ATP2C1-217ENST00000509662 ZNF157P51786 506 aaPredicted RBP29.41■■■□□ 2.3
ATP2C1-217ENST00000509662 PRMT6Q96LA8 375 aaPredicted RBP29.41■■■□□ 2.3
ATP2C1-217ENST00000509662 GNL3LQ9NVN8 582 aaKnown RBP29.41■■■□□ 2.3
ATP2C1-217ENST00000509662 SERPINA10Q9UK55 444 aa29.41■■■□□ 2.3
ATP2C1-217ENST00000509662 POLA2Q14181 598 aa29.4■■■□□ 2.3
ATP2C1-217ENST00000509662 COL13A1Q5TAT6 717 aaPredicted RBP29.4■■■□□ 2.3
ATP2C1-217ENST00000509662 PRAMEF18Q5VWM3 479 aa29.4■■■□□ 2.3
ATP2C1-217ENST00000509662 ZBTB40Q9NUA8 1239 aa29.4■■■□□ 2.3
ATP2C1-217ENST00000509662 ATP8B2P98198 1209 aa29.38■■■□□ 2.29
ATP2C1-217ENST00000509662 TTLL12Q14166 644 aaPredicted RBP29.38■■■□□ 2.29
ATP2C1-217ENST00000509662 CEP85Q6P2H3 762 aa29.38■■■□□ 2.29
ATP2C1-217ENST00000509662 SSH3Q8TE77 659 aa29.38■■■□□ 2.29
ATP2C1-217ENST00000509662 DEFB129Q9H1M3 183 aa29.38■■■□□ 2.29
ATP2C1-217ENST00000509662 PCDHAC2Q9Y5I4 1007 aa29.38■■■□□ 2.29
ATP2C1-217ENST00000509662 WDR66Q8TBY9 1149 aa29.37■■■□□ 2.29
ATP2C1-217ENST00000509662 AKAP2Q9Y2D5 859 aa29.37■■■□□ 2.29
ATP2C1-217ENST00000509662 SUGT1Q9Y2Z0 365 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms