RNA–Protein interactions for RNA: ENST00000496810.1

COL20A1-208, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-208ENST00000496810 UBTFL1P0CB47 393 aaPredicted RBP24.49■■□□□ 1.51
COL20A1-208ENST00000496810 ECE1P42892 770 aa24.49■■□□□ 1.51
COL20A1-208ENST00000496810 METTL24Q5JXM2 366 aa24.49■■□□□ 1.51
COL20A1-208ENST00000496810 PRAMEF18Q5VWM3 479 aa24.49■■□□□ 1.51
COL20A1-208ENST00000496810 ZBED3Q96IU2 234 aaPredicted RBP24.49■■□□□ 1.51
COL20A1-208ENST00000496810 FAM84BQ96KN1 310 aaPredicted RBP24.49■■□□□ 1.51
COL20A1-208ENST00000496810 ZIC5Q96T25 663 aa24.49■■□□□ 1.51
COL20A1-208ENST00000496810 LRRFIP2Q9Y608 721 aaKnown RBP24.49■■□□□ 1.51
COL20A1-208ENST00000496810 HHIPL1Q96JK4 782 aa24.48■■□□□ 1.51
COL20A1-208ENST00000496810 TRIM27P14373 513 aa24.47■■□□□ 1.51
COL20A1-208ENST00000496810 PTPN12Q05209 780 aaKnown RBP24.47■■□□□ 1.51
COL20A1-208ENST00000496810 TDRD7Q8NHU6 1098 aaKnown RBP24.47■■□□□ 1.51
COL20A1-208ENST00000496810 IQSEC3Q9UPP2 1182 aaPredicted RBP24.47■■□□□ 1.51
COL20A1-208ENST00000496810 AIDAQ96BJ3 306 aa24.46■■□□□ 1.51
COL20A1-208ENST00000496810 FAM205AQ6ZU69 1335 aa24.45■■□□□ 1.5
COL20A1-208ENST00000496810 PDE8BO95263 885 aa24.45■■□□□ 1.5
COL20A1-208ENST00000496810 HIBADHP31937 336 aaKnown RBP24.45■■□□□ 1.5
COL20A1-208ENST00000496810 MOB2Q70IA6 237 aa24.45■■□□□ 1.5
COL20A1-208ENST00000496810 HDAC9Q9UKV0 1011 aa24.45■■□□□ 1.5
COL20A1-208ENST00000496810 FAM155AB1AL88 458 aaPredicted RBP24.44■■□□□ 1.5
COL20A1-208ENST00000496810 EYA2O00167 538 aa24.44■■□□□ 1.5
COL20A1-208ENST00000496810 HSPA8P11142 646 aaKnown RBP24.44■■□□□ 1.5
COL20A1-208ENST00000496810 GRIK5Q16478 980 aa24.44■■□□□ 1.5
COL20A1-208ENST00000496810 INTS3Q68E01 1043 aaKnown RBP24.44■■□□□ 1.5
COL20A1-208ENST00000496810 ATG9AQ7Z3C6 839 aa24.44■■□□□ 1.5
COL20A1-208ENST00000496810 C2orf69Q8N8R5 385 aa24.44■■□□□ 1.5
COL20A1-208ENST00000496810 ARHGAP45Q92619 1136 aa24.44■■□□□ 1.5
COL20A1-208ENST00000496810 SIL1Q9H173 461 aa24.44■■□□□ 1.5
COL20A1-208ENST00000496810 COL1A1P02452 1464 aaPredicted RBP24.44■■□□□ 1.5
COL20A1-208ENST00000496810 FGFR2P21802 821 aa24.43■■□□□ 1.5
COL20A1-208ENST00000496810 LBX1P52954 281 aa24.43■■□□□ 1.5
COL20A1-208ENST00000496810 MAP2K1Q02750 393 aaPredicted RBP24.43■■□□□ 1.5
COL20A1-208ENST00000496810 FBXO33Q7Z6M2 555 aa24.43■■□□□ 1.5
COL20A1-208ENST00000496810 FRAT1Q92837 279 aaPredicted RBP24.43■■□□□ 1.5
COL20A1-208ENST00000496810 TSKSQ9UJT2 592 aa24.43■■□□□ 1.5
COL20A1-208ENST00000496810 PA2G4Q9UQ80 394 aaKnown RBP24.43■■□□□ 1.5
COL20A1-208ENST00000496810 SSC5DA1L4H1 1573 aa24.42■■□□□ 1.5
COL20A1-208ENST00000496810 CTCFP49711 727 aaPredicted RBP24.42■■□□□ 1.5
COL20A1-208ENST00000496810 FKBP1AP62942 108 aaKnown RBP24.42■■□□□ 1.5
COL20A1-208ENST00000496810 MFSD14BQ5SR56 506 aa24.42■■□□□ 1.5
COL20A1-208ENST00000496810 RGMBQ6NW40 437 aa24.42■■□□□ 1.5
COL20A1-208ENST00000496810 CLUAP1Q96AJ1 413 aa24.42■■□□□ 1.5
COL20A1-208ENST00000496810 BCAMP50895 628 aa24.41■■□□□ 1.5
COL20A1-208ENST00000496810 CFAP100Q494V2 611 aa24.41■■□□□ 1.5
COL20A1-208ENST00000496810 ATF7IPQ6VMQ6 1270 aa24.41■■□□□ 1.5
COL20A1-208ENST00000496810 TNS4Q8IZW8 715 aa24.41■■□□□ 1.5
COL20A1-208ENST00000496810 CLRN2A0PK11 232 aa24.4■■□□□ 1.5
COL20A1-208ENST00000496810 SPDYE2BA6NHP3 402 aa24.4■■□□□ 1.5
COL20A1-208ENST00000496810 SPDYE6P0CI01 402 aa24.4■■□□□ 1.5
COL20A1-208ENST00000496810 MAP2K2P36507 400 aa24.4■■□□□ 1.5
COL20A1-208ENST00000496810 CHAF1AQ13111 956 aaPredicted RBP24.4■■□□□ 1.5
COL20A1-208ENST00000496810 PUM3Q15397 648 aaKnown RBP24.4■■□□□ 1.5
COL20A1-208ENST00000496810 DLGAP5Q15398 846 aa24.4■■□□□ 1.5
COL20A1-208ENST00000496810 PRMT6Q96LA8 375 aaPredicted RBP24.4■■□□□ 1.5
COL20A1-208ENST00000496810 ZBED9Q6R2W3 1325 aa24.39■■□□□ 1.5
COL20A1-208ENST00000496810 MTMR14Q8NCE2 650 aa24.39■■□□□ 1.49
COL20A1-208ENST00000496810 OTOFQ9HC10 1997 aa24.38■■□□□ 1.49
COL20A1-208ENST00000496810 MMP14P50281 582 aa24.38■■□□□ 1.49
COL20A1-208ENST00000496810 ZNF157P51786 506 aaPredicted RBP24.38■■□□□ 1.49
COL20A1-208ENST00000496810 VPS37DQ86XT2 251 aa24.38■■□□□ 1.49
COL20A1-208ENST00000496810 APOBEC3FQ8IUX4 373 aaKnown RBP24.38■■□□□ 1.49
COL20A1-208ENST00000496810 TTF2Q9UNY4 1162 aaKnown RBP24.38■■□□□ 1.49
COL20A1-208ENST00000496810 FZD1Q9UP38 647 aa24.38■■□□□ 1.49
COL20A1-208ENST00000496810 AKAP11Q9UKA4 1901 aa24.37■■□□□ 1.49
COL20A1-208ENST00000496810 CASP8AP2Q9UKL3 1982 aa24.37■■□□□ 1.49
COL20A1-208ENST00000496810 SLC10A3P09131 477 aa24.37■■□□□ 1.49
COL20A1-208ENST00000496810 NOGQ13253 232 aa24.37■■□□□ 1.49
COL20A1-208ENST00000496810 RASAL3Q86YV0 1011 aa24.37■■□□□ 1.49
COL20A1-208ENST00000496810 PRDM10Q9NQV6 1147 aa24.37■■□□□ 1.49
COL20A1-208ENST00000496810 UBE2Q2LH0YL09 131 aa24.36■■□□□ 1.49
COL20A1-208ENST00000496810 TMEM57Q8N5G2 664 aa24.36■■□□□ 1.49
COL20A1-208ENST00000496810 IPO8O15397 1037 aaKnown RBP24.35■■□□□ 1.49
COL20A1-208ENST00000496810 CIAO1O76071 339 aa24.35■■□□□ 1.49
COL20A1-208ENST00000496810 RBM5P52756 815 aaKnown RBP eCLIP24.35■■□□□ 1.49
COL20A1-208ENST00000496810 CAVIN4Q5BKX8 364 aa24.35■■□□□ 1.49
COL20A1-208ENST00000496810 IFIT1P09914 478 aaKnown RBP24.34■■□□□ 1.49
COL20A1-208ENST00000496810 FKBP1BP68106 108 aa24.34■■□□□ 1.49
COL20A1-208ENST00000496810 PRKG1Q13976 671 aa24.34■■□□□ 1.49
COL20A1-208ENST00000496810 LPIN2Q92539 896 aa24.34■■□□□ 1.49
COL20A1-208ENST00000496810 DEFB129Q9H1M3 183 aa24.34■■□□□ 1.49
COL20A1-208ENST00000496810 VEZTQ9HBM0 779 aa24.34■■□□□ 1.49
COL20A1-208ENST00000496810 COPRSQ9NQ92 184 aa24.34■■□□□ 1.49
COL20A1-208ENST00000496810 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.34■■□□□ 1.49
COL20A1-208ENST00000496810 GNAI3P08754 354 aa24.33■■□□□ 1.49
COL20A1-208ENST00000496810 SLC5A1P13866 664 aa24.33■■□□□ 1.49
COL20A1-208ENST00000496810 KIF23Q02241 960 aaPredicted RBP24.33■■□□□ 1.49
COL20A1-208ENST00000496810 TTLL12Q14166 644 aaPredicted RBP24.33■■□□□ 1.49
COL20A1-208ENST00000496810 ATP2B3Q16720 1220 aa24.33■■□□□ 1.49
COL20A1-208ENST00000496810 ZKSCAN2Q63HK3 967 aa24.33■■□□□ 1.49
COL20A1-208ENST00000496810 BEGAINQ9BUH8 593 aa24.33■■□□□ 1.49
COL20A1-208ENST00000496810 SRGAP3O43295 1099 aa24.32■■□□□ 1.48
COL20A1-208ENST00000496810 FRAT2O75474 233 aaPredicted RBP24.32■■□□□ 1.48
COL20A1-208ENST00000496810 RLBP1P12271 317 aa24.32■■□□□ 1.48
COL20A1-208ENST00000496810 ADORA1P30542 326 aa24.32■■□□□ 1.48
COL20A1-208ENST00000496810 MTX1Q13505 466 aa24.32■■□□□ 1.48
COL20A1-208ENST00000496810 CDAN1Q8IWY9 1227 aa24.32■■□□□ 1.48
COL20A1-208ENST00000496810 CCDC102AQ96A19 550 aa24.32■■□□□ 1.48
COL20A1-208ENST00000496810 CRKP46108 304 aa24.31■■□□□ 1.48
COL20A1-208ENST00000496810 SPDYE2Q495Y8 402 aa24.31■■□□□ 1.48
COL20A1-208ENST00000496810 TDRD3Q9H7E2 651 aaKnown RBP24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms