RNA–Protein interactions for RNA: ENST00000490610.1

CACUL1-205, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 2

Gene CACUL1, Length 394 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-205ENST00000490610 CCDC85AQ96PX6 553 aaPredicted RBP11.13□□□□□ -0.63
CACUL1-205ENST00000490610 DNAJC2Q99543 621 aaKnown RBP11.13□□□□□ -0.63
CACUL1-205ENST00000490610 ANTXR1Q9H6X2 564 aa11.13□□□□□ -0.63
CACUL1-205ENST00000490610 CHMP5Q9NZZ3 219 aa11.13□□□□□ -0.63
CACUL1-205ENST00000490610 RIPOR2Q9Y4F9 1068 aa11.13□□□□□ -0.63
CACUL1-205ENST00000490610 MED23Q9ULK4 1368 aa11.13□□□□□ -0.63
CACUL1-205ENST00000490610 PHF14O94880 888 aa11.12□□□□□ -0.63
CACUL1-205ENST00000490610 IFIT1P09914 478 aaKnown RBP11.12□□□□□ -0.63
CACUL1-205ENST00000490610 IGHMBP2P38935 993 aaKnown RBP11.12□□□□□ -0.63
CACUL1-205ENST00000490610 SLC27A3Q5K4L6 730 aa11.12□□□□□ -0.63
CACUL1-205ENST00000490610 RNF20Q5VTR2 975 aa11.12□□□□□ -0.63
CACUL1-205ENST00000490610 KRT27Q7Z3Y8 459 aa11.12□□□□□ -0.63
CACUL1-205ENST00000490610 CDC5LQ99459 802 aaKnown RBP11.12□□□□□ -0.63
CACUL1-205ENST00000490610 MPHOSPH8Q99549 860 aa11.12□□□□□ -0.63
CACUL1-205ENST00000490610 PAG1Q9NWQ8 432 aa11.12□□□□□ -0.63
CACUL1-205ENST00000490610 A0A1B0GUL6 1792 aa11.12□□□□□ -0.63
CACUL1-205ENST00000490610 HCLS1P14317 486 aaPredicted RBP11.11□□□□□ -0.63
CACUL1-205ENST00000490610 ZKSCAN1P17029 563 aaPredicted RBP11.11□□□□□ -0.63
CACUL1-205ENST00000490610 TIMM10P62072 90 aa11.11□□□□□ -0.63
CACUL1-205ENST00000490610 NBR1Q14596 966 aa11.11□□□□□ -0.63
CACUL1-205ENST00000490610 PUM3Q15397 648 aaKnown RBP11.11□□□□□ -0.63
CACUL1-205ENST00000490610 FAM182BQ5T319 152 aa11.11□□□□□ -0.63
CACUL1-205ENST00000490610 POTEEQ6S8J3 1075 aa11.11□□□□□ -0.63
CACUL1-205ENST00000490610 PTF1AQ7RTS3 328 aa11.11□□□□□ -0.63
CACUL1-205ENST00000490610 XAGE2Q96GT9 111 aa11.11□□□□□ -0.63
CACUL1-205ENST00000490610 ZNF512BQ96KM6 892 aaPredicted RBP11.11□□□□□ -0.63
CACUL1-205ENST00000490610 IL25Q9H293 177 aa11.11□□□□□ -0.63
CACUL1-205ENST00000490610 AKAP11Q9UKA4 1901 aa11.11□□□□□ -0.63
CACUL1-205ENST00000490610 A0A0D9SFI3 127 aa11.1□□□□□ -0.63
CACUL1-205ENST00000490610 FAM177BA6PVY3 158 aa11.1□□□□□ -0.63
CACUL1-205ENST00000490610 PDE8BO95263 885 aa11.1□□□□□ -0.63
CACUL1-205ENST00000490610 CD2BP2O95400 341 aaKnown RBP11.1□□□□□ -0.63
CACUL1-205ENST00000490610 ZFYP08048 801 aaPredicted RBP11.1□□□□□ -0.63
CACUL1-205ENST00000490610 SLC5A1P13866 664 aa11.1□□□□□ -0.63
CACUL1-205ENST00000490610 GTF2E1P29083 439 aaPredicted RBP11.1□□□□□ -0.63
CACUL1-205ENST00000490610 KCNJ4P48050 445 aa11.1□□□□□ -0.63
CACUL1-205ENST00000490610 NEK4P51957 841 aa11.1□□□□□ -0.63
CACUL1-205ENST00000490610 RBM6P78332 1123 aaKnown RBP11.1□□□□□ -0.63
CACUL1-205ENST00000490610 VGLL2Q8N8G2 317 aa11.1□□□□□ -0.63
CACUL1-205ENST00000490610 LPIN2Q92539 896 aa11.1□□□□□ -0.63
CACUL1-205ENST00000490610 ZDHHC16Q969W1 377 aa11.1□□□□□ -0.63
CACUL1-205ENST00000490610 FAM227BQ96M60 508 aa11.1□□□□□ -0.63
CACUL1-205ENST00000490610 SETDB2Q96T68 719 aa11.1□□□□□ -0.63
CACUL1-205ENST00000490610 HMG20BQ9P0W2 317 aa11.1□□□□□ -0.63
CACUL1-205ENST00000490610 GOLIM4O00461 696 aa11.09□□□□□ -0.63
CACUL1-205ENST00000490610 SEMA3EO15041 775 aa11.09□□□□□ -0.63
CACUL1-205ENST00000490610 UQCRFS1P1P0C7P4 283 aa11.09□□□□□ -0.63
CACUL1-205ENST00000490610 RFC4P35249 363 aa11.09□□□□□ -0.63
CACUL1-205ENST00000490610 MLLT3P42568 568 aaPredicted RBP11.09□□□□□ -0.63
CACUL1-205ENST00000490610 KCNQ4P56696 695 aa11.09□□□□□ -0.63
CACUL1-205ENST00000490610 TTF1Q15361 905 aaPredicted RBP11.09□□□□□ -0.63
CACUL1-205ENST00000490610 SF3B3Q15393 1217 aaKnown RBP11.09□□□□□ -0.63
CACUL1-205ENST00000490610 NFKBIBQ15653 356 aa11.09□□□□□ -0.63
CACUL1-205ENST00000490610 MCMDC2Q4G0Z9 681 aa11.09□□□□□ -0.63
CACUL1-205ENST00000490610 SLC10A5Q5PT55 438 aa11.09□□□□□ -0.63
CACUL1-205ENST00000490610 TRAPPC3LQ5T215 181 aa11.09□□□□□ -0.63
CACUL1-205ENST00000490610 USPL1Q5W0Q7 1092 aa11.09□□□□□ -0.63
CACUL1-205ENST00000490610 TYW1BQ6NUM6 668 aa11.09□□□□□ -0.63
CACUL1-205ENST00000490610 DDX46Q7L014 1031 aaKnown RBP11.09□□□□□ -0.63
CACUL1-205ENST00000490610 KCNB2Q92953 911 aa11.09□□□□□ -0.63
CACUL1-205ENST00000490610 ADAM33Q9BZ11 813 aa11.09□□□□□ -0.63
CACUL1-205ENST00000490610 CWC22Q9HCG8 908 aaKnown RBP11.09□□□□□ -0.63
CACUL1-205ENST00000490610 HELLSQ9NRZ9 838 aa11.09□□□□□ -0.63
CACUL1-205ENST00000490610 PALD1Q9ULE6 856 aa11.09□□□□□ -0.63
CACUL1-205ENST00000490610 CARMIL3Q8ND23 1372 aa11.08□□□□□ -0.64
CACUL1-205ENST00000490610 DOCK2Q92608 1830 aa11.08□□□□□ -0.64
CACUL1-205ENST00000490610 GRXCR2A6NFK2 248 aa11.08□□□□□ -0.64
CACUL1-205ENST00000490610 PSMA5P28066 241 aa11.08□□□□□ -0.64
CACUL1-205ENST00000490610 SSFA2P28290 1259 aa11.08□□□□□ -0.64
CACUL1-205ENST00000490610 ADORA1P30542 326 aa11.08□□□□□ -0.64
CACUL1-205ENST00000490610 TBC1D9BQ66K14 1250 aa11.08□□□□□ -0.64
CACUL1-205ENST00000490610 ZSCAN25Q6NSZ9 544 aa11.08□□□□□ -0.64
CACUL1-205ENST00000490610 TPTE2Q6XPS3 522 aa11.08□□□□□ -0.64
CACUL1-205ENST00000490610 NBPF5PQ86XG9 351 aaPredicted RBP11.08□□□□□ -0.64
CACUL1-205ENST00000490610 ANKRD18AQ8IVF6 992 aa11.08□□□□□ -0.64
CACUL1-205ENST00000490610 MAP4K1Q92918 833 aa11.08□□□□□ -0.64
CACUL1-205ENST00000490610 EDC3Q96F86 508 aaKnown RBP11.08□□□□□ -0.64
CACUL1-205ENST00000490610 EPAS1Q99814 870 aa11.08□□□□□ -0.64
CACUL1-205ENST00000490610 TM6SF1Q9BZW5 370 aa11.08□□□□□ -0.64
CACUL1-205ENST00000490610 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.08□□□□□ -0.64
CACUL1-205ENST00000490610 RBM8AQ9Y5S9 174 aaKnown RBP11.08□□□□□ -0.64
CACUL1-205ENST00000490610 SNX14Q9Y5W7 946 aa11.08□□□□□ -0.64
CACUL1-205ENST00000490610 RGPD3A6NKT7 1758 aaPredicted RBP11.08□□□□□ -0.64
CACUL1-205ENST00000490610 RGPD4Q7Z3J3 1758 aa11.08□□□□□ -0.64
CACUL1-205ENST00000490610 RNF113AO15541 343 aaKnown RBP11.07□□□□□ -0.64
CACUL1-205ENST00000490610 ARID4AP29374 1257 aaPredicted RBP11.07□□□□□ -0.64
CACUL1-205ENST00000490610 DDIT3P35638 169 aa11.07□□□□□ -0.64
CACUL1-205ENST00000490610 PTH1RQ03431 593 aa11.07□□□□□ -0.64
CACUL1-205ENST00000490610 KRT32Q14532 448 aa11.07□□□□□ -0.64
CACUL1-205ENST00000490610 ERFEQ4G0M1 354 aa11.07□□□□□ -0.64
CACUL1-205ENST00000490610 PRPF40BQ6NWY9 871 aaKnown RBP11.07□□□□□ -0.64
CACUL1-205ENST00000490610 BCL2L12Q9HB09 334 aa11.07□□□□□ -0.64
CACUL1-205ENST00000490610 MYH13Q9UKX3 1938 aa11.07□□□□□ -0.64
CACUL1-205ENST00000490610 NPHP1O15259 732 aa11.06□□□□□ -0.64
CACUL1-205ENST00000490610 TAF5LO75529 589 aa11.06□□□□□ -0.64
CACUL1-205ENST00000490610 FGFR2P21802 821 aa11.06□□□□□ -0.64
CACUL1-205ENST00000490610 PBX2P40425 430 aa11.06□□□□□ -0.64
CACUL1-205ENST00000490610 FKBP4Q02790 459 aaKnown RBP eCLIP11.06□□□□□ -0.64
CACUL1-205ENST00000490610 NECTIN1Q15223 517 aa11.06□□□□□ -0.64
CACUL1-205ENST00000490610 ZMYM1Q5SVZ6 1142 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms