RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 HIBADHP31937 336 aaKnown RBP17.28■□□□□ 0.36
SPTLC1-207ENST00000488921 HNRNPUQ00839 825 aaKnown RBP eCLIP17.28■□□□□ 0.36
SPTLC1-207ENST00000488921 DLK2Q6UY11 383 aa17.28■□□□□ 0.36
SPTLC1-207ENST00000488921 APOBEC3FQ8IUX4 373 aaKnown RBP17.28■□□□□ 0.36
SPTLC1-207ENST00000488921 PRDM10Q9NQV6 1147 aa17.28■□□□□ 0.36
SPTLC1-207ENST00000488921 IPO8O15397 1037 aaKnown RBP17.27■□□□□ 0.36
SPTLC1-207ENST00000488921 SASH1O94885 1247 aa17.27■□□□□ 0.36
SPTLC1-207ENST00000488921 PDE8BO95263 885 aa17.27■□□□□ 0.36
SPTLC1-207ENST00000488921 FKBP1BP68106 108 aa17.27■□□□□ 0.36
SPTLC1-207ENST00000488921 NOGQ13253 232 aa17.27■□□□□ 0.36
SPTLC1-207ENST00000488921 LRRC24Q50LG9 513 aa17.27■□□□□ 0.36
SPTLC1-207ENST00000488921 VPS37DQ86XT2 251 aa17.27■□□□□ 0.36
SPTLC1-207ENST00000488921 TNS4Q8IZW8 715 aa17.27■□□□□ 0.36
SPTLC1-207ENST00000488921 FAM205AQ6ZU69 1335 aa17.26■□□□□ 0.35
SPTLC1-207ENST00000488921 AOC2O75106 756 aa17.26■□□□□ 0.35
SPTLC1-207ENST00000488921 GYG1P46976 350 aa17.26■□□□□ 0.35
SPTLC1-207ENST00000488921 DLGAP5Q15398 846 aa17.26■□□□□ 0.35
SPTLC1-207ENST00000488921 CAVIN4Q5BKX8 364 aa17.26■□□□□ 0.35
SPTLC1-207ENST00000488921 RGMBQ6NW40 437 aa17.26■□□□□ 0.35
SPTLC1-207ENST00000488921 CERS5Q8N5B7 392 aa17.26■□□□□ 0.35
SPTLC1-207ENST00000488921 MTMR14Q8NCE2 650 aa17.26■□□□□ 0.35
SPTLC1-207ENST00000488921 TDRD7Q8NHU6 1098 aaKnown RBP17.26■□□□□ 0.35
SPTLC1-207ENST00000488921 FAM84BQ96KN1 310 aaPredicted RBP17.26■□□□□ 0.35
SPTLC1-207ENST00000488921 FBXO3Q9UK99 471 aa17.26■□□□□ 0.35
SPTLC1-207ENST00000488921 AKAP11Q9UKA4 1901 aa17.25■□□□□ 0.35
SPTLC1-207ENST00000488921 CA12O43570 354 aa17.25■□□□□ 0.35
SPTLC1-207ENST00000488921 MYO1BO43795 1136 aa17.25■□□□□ 0.35
SPTLC1-207ENST00000488921 NF2P35240 595 aa17.25■□□□□ 0.35
SPTLC1-207ENST00000488921 PUM3Q15397 648 aaKnown RBP17.25■□□□□ 0.35
SPTLC1-207ENST00000488921 VGLL2Q8N8G2 317 aa17.25■□□□□ 0.35
SPTLC1-207ENST00000488921 KLHDC4Q8TBB5 520 aa17.25■□□□□ 0.35
SPTLC1-207ENST00000488921 CCDC102AQ96A19 550 aa17.25■□□□□ 0.35
SPTLC1-207ENST00000488921 ZBED3Q96IU2 234 aaPredicted RBP17.25■□□□□ 0.35
SPTLC1-207ENST00000488921 F8W031 263 aaPredicted RBP17.24■□□□□ 0.35
SPTLC1-207ENST00000488921 EYA2O00167 538 aa17.24■□□□□ 0.35
SPTLC1-207ENST00000488921 IFIT1P09914 478 aaKnown RBP17.24■□□□□ 0.35
SPTLC1-207ENST00000488921 MFSD14BQ5SR56 506 aa17.24■□□□□ 0.35
SPTLC1-207ENST00000488921 INTS3Q68E01 1043 aaKnown RBP17.24■□□□□ 0.35
SPTLC1-207ENST00000488921 FRAT2O75474 233 aaPredicted RBP17.23■□□□□ 0.35
SPTLC1-207ENST00000488921 GNAI3P08754 354 aa17.23■□□□□ 0.35
SPTLC1-207ENST00000488921 HSPA8P11142 646 aaKnown RBP17.23■□□□□ 0.35
SPTLC1-207ENST00000488921 RFX5P48382 616 aaPredicted RBP17.23■□□□□ 0.35
SPTLC1-207ENST00000488921 ZNF157P51786 506 aaPredicted RBP17.23■□□□□ 0.35
SPTLC1-207ENST00000488921 PTPN12Q05209 780 aaKnown RBP17.23■□□□□ 0.35
SPTLC1-207ENST00000488921 FBXO33Q7Z6M2 555 aa17.23■□□□□ 0.35
SPTLC1-207ENST00000488921 JAG2Q9Y219 1238 aa17.23■□□□□ 0.35
SPTLC1-207ENST00000488921 LRRFIP2Q9Y608 721 aaKnown RBP17.23■□□□□ 0.35
SPTLC1-207ENST00000488921 SLC5A1P13866 664 aa17.22■□□□□ 0.35
SPTLC1-207ENST00000488921 LBX1P52954 281 aa17.22■□□□□ 0.35
SPTLC1-207ENST00000488921 CFAP100Q494V2 611 aa17.22■□□□□ 0.35
SPTLC1-207ENST00000488921 ATF7IPQ6VMQ6 1270 aa17.22■□□□□ 0.35
SPTLC1-207ENST00000488921 TBC1D22AQ8WUA7 517 aa17.22■□□□□ 0.35
SPTLC1-207ENST00000488921 MEIS3Q99687 375 aa17.22■□□□□ 0.35
SPTLC1-207ENST00000488921 PPP2R3BQ9Y5P8 575 aa17.22■□□□□ 0.35
SPTLC1-207ENST00000488921 SPDYE2BA6NHP3 402 aa17.21■□□□□ 0.35
SPTLC1-207ENST00000488921 CIAO1O76071 339 aa17.21■□□□□ 0.35
SPTLC1-207ENST00000488921 SLC10A3P09131 477 aa17.21■□□□□ 0.35
SPTLC1-207ENST00000488921 SPDYE6P0CI01 402 aa17.21■□□□□ 0.35
SPTLC1-207ENST00000488921 TRIM27P14373 513 aa17.21■□□□□ 0.35
SPTLC1-207ENST00000488921 RBM5P52756 815 aaKnown RBP eCLIP17.21■□□□□ 0.35
SPTLC1-207ENST00000488921 LPIN2Q92539 896 aa17.21■□□□□ 0.35
SPTLC1-207ENST00000488921 FRAT1Q92837 279 aaPredicted RBP17.21■□□□□ 0.35
SPTLC1-207ENST00000488921 SCAF8Q9UPN6 1271 aaKnown RBP17.21■□□□□ 0.35
SPTLC1-207ENST00000488921 ZBED9Q6R2W3 1325 aa17.21■□□□□ 0.34
SPTLC1-207ENST00000488921 FAM155AB1AL88 458 aaPredicted RBP17.2■□□□□ 0.34
SPTLC1-207ENST00000488921 FGFR2P21802 821 aa17.2■□□□□ 0.34
SPTLC1-207ENST00000488921 TTLL12Q14166 644 aaPredicted RBP17.2■□□□□ 0.34
SPTLC1-207ENST00000488921 SERPINA10Q9UK55 444 aa17.2■□□□□ 0.34
SPTLC1-207ENST00000488921 TTF2Q9UNY4 1162 aaKnown RBP17.2■□□□□ 0.34
SPTLC1-207ENST00000488921 BCAR3O75815 825 aa17.19■□□□□ 0.34
SPTLC1-207ENST00000488921 IL15P40933 162 aaPredicted RBP17.19■□□□□ 0.34
SPTLC1-207ENST00000488921 CHAF1AQ13111 956 aaPredicted RBP17.19■□□□□ 0.34
SPTLC1-207ENST00000488921 ATG9AQ7Z3C6 839 aa17.19■□□□□ 0.34
SPTLC1-207ENST00000488921 REM2Q8IYK8 340 aaPredicted RBP17.19■□□□□ 0.34
SPTLC1-207ENST00000488921 SIL1Q9H173 461 aa17.19■□□□□ 0.34
SPTLC1-207ENST00000488921 CEP126Q9P2H0 1117 aa17.19■□□□□ 0.34
SPTLC1-207ENST00000488921 TNFAIP1Q13829 316 aa17.18■□□□□ 0.34
SPTLC1-207ENST00000488921 PRAMEF18Q5VWM3 479 aa17.18■□□□□ 0.34
SPTLC1-207ENST00000488921 ZKSCAN2Q63HK3 967 aa17.18■□□□□ 0.34
SPTLC1-207ENST00000488921 ARMC9Q7Z3E5 817 aa17.18■□□□□ 0.34
SPTLC1-207ENST00000488921 RASAL3Q86YV0 1011 aa17.18■□□□□ 0.34
SPTLC1-207ENST00000488921 DEFB129Q9H1M3 183 aa17.18■□□□□ 0.34
SPTLC1-207ENST00000488921 VEZTQ9HBM0 779 aa17.18■□□□□ 0.34
SPTLC1-207ENST00000488921 COPRSQ9NQ92 184 aa17.18■□□□□ 0.34
SPTLC1-207ENST00000488921 IQSEC3Q9UPP2 1182 aaPredicted RBP17.18■□□□□ 0.34
SPTLC1-207ENST00000488921 MAST3O60307 1309 aa17.18■□□□□ 0.34
SPTLC1-207ENST00000488921 CLRN2A0PK11 232 aa17.17■□□□□ 0.34
SPTLC1-207ENST00000488921 BCAMP50895 628 aa17.17■□□□□ 0.34
SPTLC1-207ENST00000488921 MTX1Q13505 466 aa17.17■□□□□ 0.34
SPTLC1-207ENST00000488921 ATP2B3Q16720 1220 aa17.17■□□□□ 0.34
SPTLC1-207ENST00000488921 PRMT6Q96LA8 375 aaPredicted RBP17.17■□□□□ 0.34
SPTLC1-207ENST00000488921 SAGE1Q9NXZ1 904 aa17.17■□□□□ 0.34
SPTLC1-207ENST00000488921 SUGT1Q9Y2Z0 365 aa17.17■□□□□ 0.34
SPTLC1-207ENST00000488921 LAMB1P07942 1786 aa17.17■□□□□ 0.34
SPTLC1-207ENST00000488921 SRGAP3O43295 1099 aa17.16■□□□□ 0.34
SPTLC1-207ENST00000488921 GNAI2P04899 355 aa17.16■□□□□ 0.34
SPTLC1-207ENST00000488921 HDLBPQ00341 1268 aaKnown RBP17.16■□□□□ 0.34
SPTLC1-207ENST00000488921 KIF23Q02241 960 aaPredicted RBP17.16■□□□□ 0.34
SPTLC1-207ENST00000488921 GNL3LQ9NVN8 582 aaKnown RBP17.16■□□□□ 0.34
SPTLC1-207ENST00000488921 PCDHAC2Q9Y5I4 1007 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms