RNA–Protein interactions for RNA: ENST00000488497.7

U2SURP-211, Transcript of U2 snRNP associated SURP domain containing, humanhuman

TSL 1 (best)

Gene U2SURP, Length 3,557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-211ENST00000488497 PI4KAP1Q8N8J0 262 aa8.16□□□□□ -1.1
U2SURP-211ENST00000488497 TBC1D22AQ8WUA7 517 aa8.16□□□□□ -1.1
U2SURP-211ENST00000488497 GREM2Q9H772 168 aa8.16□□□□□ -1.1
U2SURP-211ENST00000488497 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.16□□□□□ -1.1
U2SURP-211ENST00000488497 CETPP11597 493 aa8.16□□□□□ -1.1
U2SURP-211ENST00000488497 CFAP100Q494V2 611 aa8.16□□□□□ -1.1
U2SURP-211ENST00000488497 UBE3BQ7Z3V4 1068 aa8.16□□□□□ -1.1
U2SURP-211ENST00000488497 SLC51AQ86UW1 340 aa8.16□□□□□ -1.1
U2SURP-211ENST00000488497 PHAXQ9H814 394 aaKnown RBP8.16□□□□□ -1.1
U2SURP-211ENST00000488497 ELL2O00472 640 aaPredicted RBP8.15□□□□□ -1.1
U2SURP-211ENST00000488497 FRAT2O75474 233 aaPredicted RBP8.15□□□□□ -1.1
U2SURP-211ENST00000488497 PRAMEF18Q5VWM3 479 aa8.15□□□□□ -1.1
U2SURP-211ENST00000488497 LINS1Q8NG48 757 aa8.15□□□□□ -1.1
U2SURP-211ENST00000488497 CNNM1Q9NRU3 951 aa8.15□□□□□ -1.1
U2SURP-211ENST00000488497 ZNF853P0CG23 659 aa8.15□□□□□ -1.1
U2SURP-211ENST00000488497 UBXN2AP68543 259 aa8.15□□□□□ -1.1
U2SURP-211ENST00000488497 MAP3K9P80192 1104 aa8.15□□□□□ -1.1
U2SURP-211ENST00000488497 SERPINA10Q9UK55 444 aa8.15□□□□□ -1.1
U2SURP-211ENST00000488497 NEURL1BA8MQ27 555 aa8.15□□□□□ -1.11
U2SURP-211ENST00000488497 H7C1W4 665 aa8.15□□□□□ -1.11
U2SURP-211ENST00000488497 FKBP5Q13451 457 aaPredicted RBP8.15□□□□□ -1.11
U2SURP-211ENST00000488497 CD99L2Q8TCZ2 262 aa8.15□□□□□ -1.11
U2SURP-211ENST00000488497 ZNF428Q96B54 188 aa8.15□□□□□ -1.11
U2SURP-211ENST00000488497 TESPA1A2RU30 521 aaPredicted RBP8.14□□□□□ -1.11
U2SURP-211ENST00000488497 SPDYE2BA6NHP3 402 aa8.14□□□□□ -1.11
U2SURP-211ENST00000488497 SPDYE6P0CI01 402 aa8.14□□□□□ -1.11
U2SURP-211ENST00000488497 CHRNDQ07001 517 aa8.14□□□□□ -1.11
U2SURP-211ENST00000488497 ADAMTS8Q9UP79 889 aa8.14□□□□□ -1.11
U2SURP-211ENST00000488497 POLR2AP24928 1970 aaKnown RBP8.14□□□□□ -1.11
U2SURP-211ENST00000488497 SNAPC2Q13487 334 aa8.14□□□□□ -1.11
U2SURP-211ENST00000488497 NCBP3Q53F19 620 aaKnown RBP8.14□□□□□ -1.11
U2SURP-211ENST00000488497 CAVIN4Q5BKX8 364 aa8.14□□□□□ -1.11
U2SURP-211ENST00000488497 DNAAF4Q8WXU2 420 aa8.14□□□□□ -1.11
U2SURP-211ENST00000488497 CCL15-CCL14A0A0B4J2E2 113 aa8.14□□□□□ -1.11
U2SURP-211ENST00000488497 HDLBPQ00341 1268 aaKnown RBP8.14□□□□□ -1.11
U2SURP-211ENST00000488497 CRHR2Q13324 411 aa8.14□□□□□ -1.11
U2SURP-211ENST00000488497 GCKRQ14397 625 aa8.14□□□□□ -1.11
U2SURP-211ENST00000488497 RASA3Q14644 834 aa8.14□□□□□ -1.11
U2SURP-211ENST00000488497 CCL15Q16663 113 aa8.14□□□□□ -1.11
U2SURP-211ENST00000488497 ZBED3Q96IU2 234 aaPredicted RBP8.14□□□□□ -1.11
U2SURP-211ENST00000488497 APAF1O14727 1248 aa8.13□□□□□ -1.11
U2SURP-211ENST00000488497 IL1R1P14778 569 aa8.13□□□□□ -1.11
U2SURP-211ENST00000488497 UBE4AQ14139 1066 aa8.13□□□□□ -1.11
U2SURP-211ENST00000488497 TWISTNBQ3B726 338 aaPredicted RBP8.13□□□□□ -1.11
U2SURP-211ENST00000488497 OPTNQ96CV9 577 aa8.13□□□□□ -1.11
U2SURP-211ENST00000488497 IL16Q14005 1332 aa8.13□□□□□ -1.11
U2SURP-211ENST00000488497 SLC4A2P04920 1241 aa8.13□□□□□ -1.11
U2SURP-211ENST00000488497 ZEB1P37275 1124 aaPredicted RBP8.13□□□□□ -1.11
U2SURP-211ENST00000488497 LDHAL6AQ6ZMR3 332 aa8.13□□□□□ -1.11
U2SURP-211ENST00000488497 TRIM47Q96LD4 638 aa8.13□□□□□ -1.11
U2SURP-211ENST00000488497 SUGT1Q9Y2Z0 365 aa8.13□□□□□ -1.11
U2SURP-211ENST00000488497 F8W031 263 aaPredicted RBP8.12□□□□□ -1.11
U2SURP-211ENST00000488497 ERO1BQ86YB8 467 aa8.12□□□□□ -1.11
U2SURP-211ENST00000488497 C9orf78Q9NZ63 289 aaPredicted RBP8.12□□□□□ -1.11
U2SURP-211ENST00000488497 HDAC5Q9UQL6 1122 aa8.12□□□□□ -1.11
U2SURP-211ENST00000488497 PSME4Q14997 1843 aa8.12□□□□□ -1.11
U2SURP-211ENST00000488497 CLRN2A0PK11 232 aa8.12□□□□□ -1.11
U2SURP-211ENST00000488497 CSF1RP07333 972 aa8.12□□□□□ -1.11
U2SURP-211ENST00000488497 HIBADHP31937 336 aaKnown RBP8.12□□□□□ -1.11
U2SURP-211ENST00000488497 ELP3Q9H9T3 547 aa8.12□□□□□ -1.11
U2SURP-211ENST00000488497 BIN2Q9UBW5 565 aaPredicted RBP8.12□□□□□ -1.11
U2SURP-211ENST00000488497 TTF2Q9UNY4 1162 aaKnown RBP8.12□□□□□ -1.11
U2SURP-211ENST00000488497 CCDC27Q2M243 656 aa8.12□□□□□ -1.11
U2SURP-211ENST00000488497 MFSD14BQ5SR56 506 aa8.12□□□□□ -1.11
U2SURP-211ENST00000488497 RAET1EQ8TD07 263 aa8.12□□□□□ -1.11
U2SURP-211ENST00000488497 DPF3Q92784 378 aa8.12□□□□□ -1.11
U2SURP-211ENST00000488497 TEKT1Q969V4 418 aa8.12□□□□□ -1.11
U2SURP-211ENST00000488497 ZNF333Q96JL9 665 aa8.12□□□□□ -1.11
U2SURP-211ENST00000488497 FAM205AQ6ZU69 1335 aa8.12□□□□□ -1.11
U2SURP-211ENST00000488497 FLIIQ13045 1269 aa8.11□□□□□ -1.11
U2SURP-211ENST00000488497 SPDYE2Q495Y8 402 aa8.11□□□□□ -1.11
U2SURP-211ENST00000488497 FKBP1CQ5VVH2 108 aa8.11□□□□□ -1.11
U2SURP-211ENST00000488497 JARID2Q92833 1246 aaPredicted RBP8.11□□□□□ -1.11
U2SURP-211ENST00000488497 ZNF70Q9UC06 446 aaPredicted RBP8.11□□□□□ -1.11
U2SURP-211ENST00000488497 IGF2BP3O00425 579 aaKnown RBP eCLIP8.11□□□□□ -1.11
U2SURP-211ENST00000488497 USP2O75604 605 aaPredicted RBP8.11□□□□□ -1.11
U2SURP-211ENST00000488497 IGKV5-2P06315 115 aa8.11□□□□□ -1.11
U2SURP-211ENST00000488497 C8orf58Q8NAV2 365 aa8.11□□□□□ -1.11
U2SURP-211ENST00000488497 MXD3Q9BW11 206 aa8.11□□□□□ -1.11
U2SURP-211ENST00000488497 ZNF341Q9BYN7 854 aa8.11□□□□□ -1.11
U2SURP-211ENST00000488497 MROH5Q6ZUA9 1318 aa8.11□□□□□ -1.11
U2SURP-211ENST00000488497 A0A1W2PPC1 479 aa8.1□□□□□ -1.11
U2SURP-211ENST00000488497 POTEFA5A3E0 1075 aa8.1□□□□□ -1.11
U2SURP-211ENST00000488497 DDX10Q13206 875 aaKnown RBP8.1□□□□□ -1.11
U2SURP-211ENST00000488497 CWF19L2Q2TBE0 894 aaKnown RBP8.1□□□□□ -1.11
U2SURP-211ENST00000488497 NBPF12Q5TAG4 269 aaPredicted RBP8.1□□□□□ -1.11
U2SURP-211ENST00000488497 PARK7Q99497 189 aaKnown RBP8.1□□□□□ -1.11
U2SURP-211ENST00000488497 MRIQ9BWK5 157 aa8.1□□□□□ -1.11
U2SURP-211ENST00000488497 SCN9AQ15858 1988 aa8.1□□□□□ -1.11
U2SURP-211ENST00000488497 PLIN1O60240 522 aa8.1□□□□□ -1.11
U2SURP-211ENST00000488497 TLR2O60603 784 aa8.1□□□□□ -1.11
U2SURP-211ENST00000488497 ALDH1L1O75891 902 aa8.1□□□□□ -1.11
U2SURP-211ENST00000488497 PPIL2Q13356 520 aa8.1□□□□□ -1.11
U2SURP-211ENST00000488497 FAM83AQ86UY5 434 aa8.1□□□□□ -1.11
U2SURP-211ENST00000488497 GNL3LQ9NVN8 582 aaKnown RBP8.1□□□□□ -1.11
U2SURP-211ENST00000488497 SPDYE5A6NIY4 337 aa8.1□□□□□ -1.11
U2SURP-211ENST00000488497 FMNL1O95466 1100 aaPredicted RBP8.1□□□□□ -1.11
U2SURP-211ENST00000488497 IFIT1P09914 478 aaKnown RBP8.1□□□□□ -1.11
U2SURP-211ENST00000488497 EN2P19622 333 aaPredicted RBP8.1□□□□□ -1.11
U2SURP-211ENST00000488497 FCGRTP55899 365 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms