RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 FKBP1AP62942 108 aaKnown RBP25.5■■□□□ 1.67
HDAC4-209ENST00000487617 CAVIN4Q5BKX8 364 aa25.5■■□□□ 1.67
HDAC4-209ENST00000487617 CAPNS2Q96L46 248 aa25.5■■□□□ 1.67
HDAC4-209ENST00000487617 PITPNM2Q9BZ72 1349 aa25.5■■□□□ 1.67
HDAC4-209ENST00000487617 SIL1Q9H173 461 aa25.5■■□□□ 1.67
HDAC4-209ENST00000487617 F8W031 263 aaPredicted RBP25.49■■□□□ 1.67
HDAC4-209ENST00000487617 ECE1P42892 770 aa25.49■■□□□ 1.67
HDAC4-209ENST00000487617 GRM1Q13255 1194 aa25.49■■□□□ 1.67
HDAC4-209ENST00000487617 PUM3Q15397 648 aaKnown RBP25.49■■□□□ 1.67
HDAC4-209ENST00000487617 CYP4F22Q6NT55 531 aa25.49■■□□□ 1.67
HDAC4-209ENST00000487617 FBXO33Q7Z6M2 555 aa25.49■■□□□ 1.67
HDAC4-209ENST00000487617 FAM205AQ6ZU69 1335 aa25.48■■□□□ 1.67
HDAC4-209ENST00000487617 IFIT1P09914 478 aaKnown RBP25.48■■□□□ 1.67
HDAC4-209ENST00000487617 ATG9AQ7Z3C6 839 aa25.48■■□□□ 1.67
HDAC4-209ENST00000487617 CDCA5Q96FF9 252 aa25.48■■□□□ 1.67
HDAC4-209ENST00000487617 FBXO3Q9UK99 471 aa25.48■■□□□ 1.67
HDAC4-209ENST00000487617 CIAO1O76071 339 aa25.47■■□□□ 1.67
HDAC4-209ENST00000487617 TMEM57Q8N5G2 664 aa25.47■■□□□ 1.67
HDAC4-209ENST00000487617 C2orf69Q8N8R5 385 aa25.47■■□□□ 1.67
HDAC4-209ENST00000487617 GBA2Q9HCG7 927 aaPredicted RBP25.47■■□□□ 1.67
HDAC4-209ENST00000487617 SCAF8Q9UPN6 1271 aaKnown RBP25.47■■□□□ 1.67
HDAC4-209ENST00000487617 PA2G4Q9UQ80 394 aaKnown RBP25.47■■□□□ 1.67
HDAC4-209ENST00000487617 FGFR2P21802 821 aa25.46■■□□□ 1.67
HDAC4-209ENST00000487617 DLGAP5Q15398 846 aa25.46■■□□□ 1.67
HDAC4-209ENST00000487617 HHIPL1Q96JK4 782 aa25.46■■□□□ 1.67
HDAC4-209ENST00000487617 IQSEC3Q9UPP2 1182 aaPredicted RBP25.46■■□□□ 1.67
HDAC4-209ENST00000487617 FRAT2O75474 233 aaPredicted RBP25.45■■□□□ 1.66
HDAC4-209ENST00000487617 SLC5A1P13866 664 aa25.45■■□□□ 1.66
HDAC4-209ENST00000487617 BCAMP50895 628 aa25.45■■□□□ 1.66
HDAC4-209ENST00000487617 HUNKP57058 714 aa25.45■■□□□ 1.66
HDAC4-209ENST00000487617 MFSD14BQ5SR56 506 aa25.45■■□□□ 1.66
HDAC4-209ENST00000487617 LPIN2Q92539 896 aa25.45■■□□□ 1.66
HDAC4-209ENST00000487617 ZBED3Q96IU2 234 aaPredicted RBP25.45■■□□□ 1.66
HDAC4-209ENST00000487617 CEP126Q9P2H0 1117 aa25.45■■□□□ 1.66
HDAC4-209ENST00000487617 POLR2AP24928 1970 aaKnown RBP25.45■■□□□ 1.66
HDAC4-209ENST00000487617 SRGAP3O43295 1099 aa25.44■■□□□ 1.66
HDAC4-209ENST00000487617 GNAI2P04899 355 aa25.44■■□□□ 1.66
HDAC4-209ENST00000487617 FTSJ3Q8IY81 847 aaKnown RBP25.44■■□□□ 1.66
HDAC4-209ENST00000487617 COPRSQ9NQ92 184 aa25.44■■□□□ 1.66
HDAC4-209ENST00000487617 IL15P40933 162 aaPredicted RBP25.43■■□□□ 1.66
HDAC4-209ENST00000487617 CHAF1AQ13111 956 aaPredicted RBP25.43■■□□□ 1.66
HDAC4-209ENST00000487617 MTMR14Q8NCE2 650 aa25.43■■□□□ 1.66
HDAC4-209ENST00000487617 MTX1Q13505 466 aa25.42■■□□□ 1.66
HDAC4-209ENST00000487617 CFAP100Q494V2 611 aa25.42■■□□□ 1.66
HDAC4-209ENST00000487617 DZIP1LQ8IYY4 767 aaKnown RBP25.42■■□□□ 1.66
HDAC4-209ENST00000487617 AIDAQ96BJ3 306 aa25.42■■□□□ 1.66
HDAC4-209ENST00000487617 RBM5P52756 815 aaKnown RBP eCLIP25.41■■□□□ 1.66
HDAC4-209ENST00000487617 ATP2B3Q16720 1220 aa25.41■■□□□ 1.66
HDAC4-209ENST00000487617 PRAMEF18Q5VWM3 479 aa25.41■■□□□ 1.66
HDAC4-209ENST00000487617 APOBEC3FQ8IUX4 373 aaKnown RBP25.41■■□□□ 1.66
HDAC4-209ENST00000487617 TTF2Q9UNY4 1162 aaKnown RBP25.41■■□□□ 1.66
HDAC4-209ENST00000487617 PCDHAC2Q9Y5I4 1007 aa25.41■■□□□ 1.66
HDAC4-209ENST00000487617 AOC2O75106 756 aa25.4■■□□□ 1.66
HDAC4-209ENST00000487617 MAP2K1Q02750 393 aaPredicted RBP25.4■■□□□ 1.66
HDAC4-209ENST00000487617 WBP1LQ9NX94 342 aa25.4■■□□□ 1.66
HDAC4-209ENST00000487617 SPDYE2BA6NHP3 402 aa25.39■■□□□ 1.66
HDAC4-209ENST00000487617 MYO1BO43795 1136 aa25.39■■□□□ 1.66
HDAC4-209ENST00000487617 SPDYE6P0CI01 402 aa25.39■■□□□ 1.66
HDAC4-209ENST00000487617 ITPRIPQ8IWB1 547 aa25.39■■□□□ 1.66
HDAC4-209ENST00000487617 TBC1D22AQ8WUA7 517 aa25.39■■□□□ 1.66
HDAC4-209ENST00000487617 FOXN1O15353 648 aa25.38■■□□□ 1.65
HDAC4-209ENST00000487617 RLBP1P12271 317 aa25.38■■□□□ 1.65
HDAC4-209ENST00000487617 MAP2K2P36507 400 aa25.38■■□□□ 1.65
HDAC4-209ENST00000487617 RGMBQ6NW40 437 aa25.38■■□□□ 1.65
HDAC4-209ENST00000487617 PRMT6Q96LA8 375 aaPredicted RBP25.38■■□□□ 1.65
HDAC4-209ENST00000487617 SERPINA10Q9UK55 444 aa25.37■■□□□ 1.65
HDAC4-209ENST00000487617 PCNTO95613 3336 aa25.37■■□□□ 1.65
HDAC4-209ENST00000487617 CLRN2A0PK11 232 aa25.36■■□□□ 1.65
HDAC4-209ENST00000487617 NF2P35240 595 aa25.36■■□□□ 1.65
HDAC4-209ENST00000487617 FKBP1BP68106 108 aa25.36■■□□□ 1.65
HDAC4-209ENST00000487617 PNMA6EA0A0J9YXQ4 647 aa25.35■■□□□ 1.65
HDAC4-209ENST00000487617 ZNF157P51786 506 aaPredicted RBP25.35■■□□□ 1.65
HDAC4-209ENST00000487617 GRIK5Q16478 980 aa25.35■■□□□ 1.65
HDAC4-209ENST00000487617 COL13A1Q5TAT6 717 aaPredicted RBP25.35■■□□□ 1.65
HDAC4-209ENST00000487617 VEZTQ9HBM0 779 aa25.35■■□□□ 1.65
HDAC4-209ENST00000487617 CRKP46108 304 aa25.34■■□□□ 1.65
HDAC4-209ENST00000487617 CTCFP49711 727 aaPredicted RBP25.34■■□□□ 1.65
HDAC4-209ENST00000487617 NOGQ13253 232 aa25.34■■□□□ 1.65
HDAC4-209ENST00000487617 TTLL12Q14166 644 aaPredicted RBP25.34■■□□□ 1.65
HDAC4-209ENST00000487617 CCDC102AQ96A19 550 aa25.34■■□□□ 1.65
HDAC4-209ENST00000487617 BEGAINQ9BUH8 593 aa25.34■■□□□ 1.65
HDAC4-209ENST00000487617 DEFB129Q9H1M3 183 aa25.34■■□□□ 1.65
HDAC4-209ENST00000487617 GNL3LQ9NVN8 582 aaKnown RBP25.34■■□□□ 1.65
HDAC4-209ENST00000487617 AOX1Q06278 1338 aa25.34■■□□□ 1.65
HDAC4-209ENST00000487617 THSD7BQ9C0I4 1608 aa25.34■■□□□ 1.65
HDAC4-209ENST00000487617 TFCP2Q12800 502 aa25.33■■□□□ 1.65
HDAC4-209ENST00000487617 MOB2Q70IA6 237 aa25.33■■□□□ 1.65
HDAC4-209ENST00000487617 ZBTB7BO15156 539 aaPredicted RBP25.32■■□□□ 1.64
HDAC4-209ENST00000487617 WDR66Q8TBY9 1149 aa25.32■■□□□ 1.64
HDAC4-209ENST00000487617 C1orf115Q9H7X2 142 aa25.32■■□□□ 1.64
HDAC4-209ENST00000487617 AKAP2Q9Y2D5 859 aa25.32■■□□□ 1.64
HDAC4-209ENST00000487617 FAM155AB1AL88 458 aaPredicted RBP25.31■■□□□ 1.64
HDAC4-209ENST00000487617 UBE2Q2LH0YL09 131 aa25.31■■□□□ 1.64
HDAC4-209ENST00000487617 ADORA1P30542 326 aa25.31■■□□□ 1.64
HDAC4-209ENST00000487617 PHKA1P46020 1223 aa25.31■■□□□ 1.64
HDAC4-209ENST00000487617 TIMM10P62072 90 aa25.31■■□□□ 1.64
HDAC4-209ENST00000487617 HDLBPQ00341 1268 aaKnown RBP25.31■■□□□ 1.64
HDAC4-209ENST00000487617 G3BP1Q13283 466 aaKnown RBP eCLIP25.31■■□□□ 1.64
HDAC4-209ENST00000487617 PANK1Q8TE04 598 aa25.31■■□□□ 1.64
HDAC4-209ENST00000487617 TDRD3Q9H7E2 651 aaKnown RBP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms