RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 IL6STP40189 918 aaPredicted RBP8.98□□□□□ -0.97
HDAC3-209ENST00000486618 CLK2P49760 499 aaKnown RBP8.98□□□□□ -0.97
HDAC3-209ENST00000486618 MAP2K1Q02750 393 aaPredicted RBP8.98□□□□□ -0.97
HDAC3-209ENST00000486618 DEFB115Q30KQ5 88 aa8.98□□□□□ -0.97
HDAC3-209ENST00000486618 EAPPQ56P03 285 aaPredicted RBP8.98□□□□□ -0.97
HDAC3-209ENST00000486618 ZNF787Q6DD87 383 aa8.98□□□□□ -0.97
HDAC3-209ENST00000486618 PRPF40BQ6NWY9 871 aaKnown RBP8.98□□□□□ -0.97
HDAC3-209ENST00000486618 LYPD8Q6UX82 237 aa8.98□□□□□ -0.97
HDAC3-209ENST00000486618 PNMA8AQ86V59 439 aaPredicted RBP8.98□□□□□ -0.97
HDAC3-209ENST00000486618 CRIPAKQ8N1N5 446 aa8.98□□□□□ -0.97
HDAC3-209ENST00000486618 KDM4CQ9H3R0 1056 aa8.98□□□□□ -0.97
HDAC3-209ENST00000486618 HACL1Q9UJ83 578 aa8.98□□□□□ -0.97
HDAC3-209ENST00000486618 TBC1D2BQ9UPU7 963 aa8.98□□□□□ -0.97
HDAC3-209ENST00000486618 KNSTRNQ9Y448 316 aa8.98□□□□□ -0.97
HDAC3-209ENST00000486618 SLX4Q8IY92 1834 aa8.98□□□□□ -0.97
HDAC3-209ENST00000486618 LILRB3O75022 631 aa8.97□□□□□ -0.97
HDAC3-209ENST00000486618 HMOX1P09601 288 aa8.97□□□□□ -0.97
HDAC3-209ENST00000486618 SH3BP2P78314 561 aa8.97□□□□□ -0.97
HDAC3-209ENST00000486618 TEFQ10587 303 aa8.97□□□□□ -0.97
HDAC3-209ENST00000486618 MTHFSDQ2M296 383 aaKnown RBP8.97□□□□□ -0.97
HDAC3-209ENST00000486618 CCDC93Q567U6 631 aa8.97□□□□□ -0.97
HDAC3-209ENST00000486618 ABHD8Q96I13 439 aa8.97□□□□□ -0.97
HDAC3-209ENST00000486618 CACNA1SQ13698 1873 aa8.97□□□□□ -0.97
HDAC3-209ENST00000486618 UBR2Q8IWV8 1755 aa8.96□□□□□ -0.97
HDAC3-209ENST00000486618 RASSF10A6NK89 507 aa8.96□□□□□ -0.98
HDAC3-209ENST00000486618 J3QL48 77 aa8.96□□□□□ -0.98
HDAC3-209ENST00000486618 EPHX2P34913 555 aa8.96□□□□□ -0.98
HDAC3-209ENST00000486618 ZEB1P37275 1124 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-209ENST00000486618 EIF4G2P78344 907 aaKnown RBP eCLIP8.96□□□□□ -0.98
HDAC3-209ENST00000486618 FOXD4L5Q5VV16 416 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-209ENST00000486618 CERS3Q8IU89 383 aa8.96□□□□□ -0.98
HDAC3-209ENST00000486618 FOXD4L4Q8WXT5 416 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-209ENST00000486618 NAP1L5Q96NT1 182 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-209ENST00000486618 TRAIPQ9BWF2 469 aa8.96□□□□□ -0.98
HDAC3-209ENST00000486618 COL11A2P13942 1736 aaPredicted RBP8.96□□□□□ -0.98
HDAC3-209ENST00000486618 HEG1Q9ULI3 1381 aa8.96□□□□□ -0.98
HDAC3-209ENST00000486618 ARFGEF2Q9Y6D5 1785 aa8.95□□□□□ -0.98
HDAC3-209ENST00000486618 HSPA8P11142 646 aaKnown RBP8.95□□□□□ -0.98
HDAC3-209ENST00000486618 NPR1P16066 1061 aa8.95□□□□□ -0.98
HDAC3-209ENST00000486618 CTHP32929 405 aa8.95□□□□□ -0.98
HDAC3-209ENST00000486618 FKBP4Q02790 459 aaKnown RBP eCLIP8.95□□□□□ -0.98
HDAC3-209ENST00000486618 LINC01559Q495D7 138 aa8.95□□□□□ -0.98
HDAC3-209ENST00000486618 ZNF790Q6PG37 636 aa8.95□□□□□ -0.98
HDAC3-209ENST00000486618 CLEC4GQ6UXB4 293 aa8.95□□□□□ -0.98
HDAC3-209ENST00000486618 NBPF5PQ86XG9 351 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-209ENST00000486618 RTKN2Q8IZC4 609 aa8.95□□□□□ -0.98
HDAC3-209ENST00000486618 CNTROBQ8N137 903 aa8.95□□□□□ -0.98
HDAC3-209ENST00000486618 EHBP1Q8NDI1 1231 aa8.95□□□□□ -0.98
HDAC3-209ENST00000486618 C7orf43Q8WVR3 580 aa8.95□□□□□ -0.98
HDAC3-209ENST00000486618 BAP1Q92560 729 aa8.95□□□□□ -0.98
HDAC3-209ENST00000486618 ZNF428Q96B54 188 aa8.95□□□□□ -0.98
HDAC3-209ENST00000486618 ZNF496Q96IT1 587 aaPredicted RBP8.95□□□□□ -0.98
HDAC3-209ENST00000486618 FMNL2Q96PY5 1086 aa8.95□□□□□ -0.98
HDAC3-209ENST00000486618 POLR3EQ9NVU0 708 aa8.95□□□□□ -0.98
HDAC3-209ENST00000486618 ABT1Q9ULW3 272 aaKnown RBP8.95□□□□□ -0.98
HDAC3-209ENST00000486618 WDR33Q9C0J8 1336 aaKnown RBP8.95□□□□□ -0.98
HDAC3-209ENST00000486618 SCN7AQ01118 1682 aa8.94□□□□□ -0.98
HDAC3-209ENST00000486618 GNAT3A8MTJ3 354 aa8.94□□□□□ -0.98
HDAC3-209ENST00000486618 PER1O15534 1290 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-209ENST00000486618 SIAH2O43255 324 aa8.94□□□□□ -0.98
HDAC3-209ENST00000486618 DIAPH1O60610 1272 aaKnown RBP8.94□□□□□ -0.98
HDAC3-209ENST00000486618 CAMTA2O94983 1202 aa8.94□□□□□ -0.98
HDAC3-209ENST00000486618 F12P00748 615 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-209ENST00000486618 CENPBP07199 599 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-209ENST00000486618 ECE1P42892 770 aa8.94□□□□□ -0.98
HDAC3-209ENST00000486618 MFAP1P55081 439 aaKnown RBP8.94□□□□□ -0.98
HDAC3-209ENST00000486618 MLLT1Q03111 559 aaPredicted RBP8.94□□□□□ -0.98
HDAC3-209ENST00000486618 CTC1Q2NKJ3 1217 aa8.94□□□□□ -0.98
HDAC3-209ENST00000486618 TPTE2Q6XPS3 522 aa8.94□□□□□ -0.98
HDAC3-209ENST00000486618 DZIP3Q86Y13 1208 aaKnown RBP8.94□□□□□ -0.98
HDAC3-209ENST00000486618 TSC1Q92574 1164 aa8.94□□□□□ -0.98
HDAC3-209ENST00000486618 FAM117AQ9C073 453 aa8.94□□□□□ -0.98
HDAC3-209ENST00000486618 CWC22Q9HCG8 908 aaKnown RBP8.94□□□□□ -0.98
HDAC3-209ENST00000486618 MAP10Q9P2G4 905 aa8.94□□□□□ -0.98
HDAC3-209ENST00000486618 ZNF652Q9Y2D9 606 aa8.94□□□□□ -0.98
HDAC3-209ENST00000486618 CCDC85CA6NKD9 419 aa8.93□□□□□ -0.98
HDAC3-209ENST00000486618 AXIN1O15169 862 aa8.93□□□□□ -0.98
HDAC3-209ENST00000486618 A1BGP04217 495 aa8.93□□□□□ -0.98
HDAC3-209ENST00000486618 ALDH1B1P30837 517 aa8.93□□□□□ -0.98
HDAC3-209ENST00000486618 SMCPP49901 116 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-209ENST00000486618 RTL5Q5HYW3 569 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-209ENST00000486618 MAP1SQ66K74 1059 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-209ENST00000486618 GPC2Q8N158 579 aa8.93□□□□□ -0.98
HDAC3-209ENST00000486618 ZNF511Q8NB15 262 aa8.93□□□□□ -0.98
HDAC3-209ENST00000486618 GAS2L2Q8NHY3 880 aa8.93□□□□□ -0.98
HDAC3-209ENST00000486618 JDP2Q8WYK2 163 aa8.93□□□□□ -0.98
HDAC3-209ENST00000486618 ZNF277Q9NRM2 450 aaPredicted RBP8.93□□□□□ -0.98
HDAC3-209ENST00000486618 DACH1Q9UI36 760 aa8.93□□□□□ -0.98
HDAC3-209ENST00000486618 BRPF3Q9ULD4 1205 aa8.93□□□□□ -0.98
HDAC3-209ENST00000486618 ZNF541Q9H0D2 1346 aa8.93□□□□□ -0.98
HDAC3-209ENST00000486618 RNF123Q5XPI4 1314 aa8.92□□□□□ -0.98
HDAC3-209ENST00000486618 KLRG2A4D1S0 409 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-209ENST00000486618 FZD9O00144 591 aa8.92□□□□□ -0.98
HDAC3-209ENST00000486618 HSPA5P11021 654 aaKnown RBP8.92□□□□□ -0.98
HDAC3-209ENST00000486618 LMOD1P29536 600 aaPredicted RBP8.92□□□□□ -0.98
HDAC3-209ENST00000486618 IARSP41252 1262 aaKnown RBP8.92□□□□□ -0.98
HDAC3-209ENST00000486618 RGS19P49795 217 aa8.92□□□□□ -0.98
HDAC3-209ENST00000486618 EIF6P56537 245 aaKnown RBP8.92□□□□□ -0.98
HDAC3-209ENST00000486618 IL17REQ8NFR9 667 aa8.92□□□□□ -0.98
HDAC3-209ENST00000486618 DDRGK1Q96HY6 314 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms