RNA–Protein interactions for RNA: ENST00000486506.5

MECP2-209, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 2,907 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-209ENST00000486506 C5P01031 1676 aa9.13□□□□□ -0.95
MECP2-209ENST00000486506 SYCE3A1L190 88 aa9.13□□□□□ -0.95
MECP2-209ENST00000486506 GOLGA6CA6NDK9 693 aa9.13□□□□□ -0.95
MECP2-209ENST00000486506 GOLGA6BA6NDN3 693 aa9.13□□□□□ -0.95
MECP2-209ENST00000486506 KDM4AO75164 1064 aa9.13□□□□□ -0.95
MECP2-209ENST00000486506 TRIM37O94972 964 aa9.13□□□□□ -0.95
MECP2-209ENST00000486506 CD2BP2O95400 341 aaKnown RBP9.13□□□□□ -0.95
MECP2-209ENST00000486506 GOLGA6DP0CG33 693 aa9.13□□□□□ -0.95
MECP2-209ENST00000486506 ITPK1Q13572 414 aa9.13□□□□□ -0.95
MECP2-209ENST00000486506 INTS3Q68E01 1043 aaKnown RBP9.13□□□□□ -0.95
MECP2-209ENST00000486506 GOLGA6AQ9NYA3 693 aa9.13□□□□□ -0.95
MECP2-209ENST00000486506 TMEM63CQ9P1W3 806 aa9.13□□□□□ -0.95
MECP2-209ENST00000486506 CYP19A1P11511 503 aaPredicted RBP9.12□□□□□ -0.95
MECP2-209ENST00000486506 TTLL7Q6ZT98 887 aa9.12□□□□□ -0.95
MECP2-209ENST00000486506 CCDC186Q7Z3E2 898 aa9.12□□□□□ -0.95
MECP2-209ENST00000486506 TRIM74Q86UV6 250 aa9.12□□□□□ -0.95
MECP2-209ENST00000486506 TRIM73Q86UV7 250 aa9.12□□□□□ -0.95
MECP2-209ENST00000486506 NUTM1Q86Y26 1132 aa9.12□□□□□ -0.95
MECP2-209ENST00000486506 FAM177A1Q8N128 213 aaPredicted RBP9.12□□□□□ -0.95
MECP2-209ENST00000486506 DNAAF4Q8WXU2 420 aa9.12□□□□□ -0.95
MECP2-209ENST00000486506 AK7Q96M32 723 aa9.12□□□□□ -0.95
MECP2-209ENST00000486506 MEIS3Q99687 375 aa9.12□□□□□ -0.95
MECP2-209ENST00000486506 ZBTB40Q9NUA8 1239 aa9.12□□□□□ -0.95
MECP2-209ENST00000486506 ZBTB1Q9Y2K1 713 aa9.12□□□□□ -0.95
MECP2-209ENST00000486506 ADCY9O60503 1353 aa9.12□□□□□ -0.95
MECP2-209ENST00000486506 PRPF40AO75400 957 aaKnown RBP9.12□□□□□ -0.95
MECP2-209ENST00000486506 ICA1Q05084 483 aa9.12□□□□□ -0.95
MECP2-209ENST00000486506 PDCD2Q16342 344 aaPredicted RBP9.12□□□□□ -0.95
MECP2-209ENST00000486506 FAM196AQ6ZSG2 479 aa9.12□□□□□ -0.95
MECP2-209ENST00000486506 RIC3Q7Z5B4 369 aa9.12□□□□□ -0.95
MECP2-209ENST00000486506 CCDC112Q8NEF3 446 aa9.12□□□□□ -0.95
MECP2-209ENST00000486506 TSPY26PQ9H489 355 aa9.12□□□□□ -0.95
MECP2-209ENST00000486506 TTC12Q9H892 705 aaPredicted RBP9.12□□□□□ -0.95
MECP2-209ENST00000486506 A1CFQ9NQ94 594 aaKnown RBP9.12□□□□□ -0.95
MECP2-209ENST00000486506 NEBLO76041 1014 aa9.11□□□□□ -0.95
MECP2-209ENST00000486506 FAM163BP0C2L3 166 aa9.11□□□□□ -0.95
MECP2-209ENST00000486506 ZRSR1Q15695 479 aaKnown RBP9.11□□□□□ -0.95
MECP2-209ENST00000486506 FOXD4L6Q3SYB3 417 aaPredicted RBP9.11□□□□□ -0.95
MECP2-209ENST00000486506 SPTY2D1Q68D10 685 aaPredicted RBP9.11□□□□□ -0.95
MECP2-209ENST00000486506 KSR2Q6VAB6 950 aa9.11□□□□□ -0.95
MECP2-209ENST00000486506 FOXD4L3Q6VB84 417 aaPredicted RBP9.11□□□□□ -0.95
MECP2-209ENST00000486506 ANKRD13DQ6ZTN6 518 aa9.11□□□□□ -0.95
MECP2-209ENST00000486506 C17orf53Q8N3J3 647 aaPredicted RBP9.11□□□□□ -0.95
MECP2-209ENST00000486506 SMARCC1Q92922 1105 aaPredicted RBP9.11□□□□□ -0.95
MECP2-209ENST00000486506 TMX4Q9H1E5 349 aaPredicted RBP9.11□□□□□ -0.95
MECP2-209ENST00000486506 CWF19L2Q2TBE0 894 aaKnown RBP9.11□□□□□ -0.95
MECP2-209ENST00000486506 TEX11Q8IYF3 940 aa9.11□□□□□ -0.95
MECP2-209ENST00000486506 GIMAP7Q8NHV1 300 aa9.11□□□□□ -0.95
MECP2-209ENST00000486506 ZBTB3Q9H5J0 574 aa9.11□□□□□ -0.95
MECP2-209ENST00000486506 PAPPAQ13219 1627 aa9.11□□□□□ -0.95
MECP2-209ENST00000486506 EIF3CLB5ME19 914 aaKnown RBP9.11□□□□□ -0.95
MECP2-209ENST00000486506 DDX58O95786 925 aaKnown RBP9.11□□□□□ -0.95
MECP2-209ENST00000486506 MBD3O95983 291 aa9.11□□□□□ -0.95
MECP2-209ENST00000486506 CCT4P50991 539 aaKnown RBP9.11□□□□□ -0.95
MECP2-209ENST00000486506 CORO7P57737 925 aa9.11□□□□□ -0.95
MECP2-209ENST00000486506 RNF214Q8ND24 703 aa9.11□□□□□ -0.95
MECP2-209ENST00000486506 EIF3CQ99613 913 aaKnown RBP9.11□□□□□ -0.95
MECP2-209ENST00000486506 MAF1Q9H063 256 aa9.11□□□□□ -0.95
MECP2-209ENST00000486506 RANBP17Q9H2T7 1088 aaKnown RBP9.11□□□□□ -0.95
MECP2-209ENST00000486506 UBR2Q8IWV8 1755 aa9.11□□□□□ -0.95
MECP2-209ENST00000486506 CRKLP46109 303 aaKnown RBP9.1□□□□□ -0.95
MECP2-209ENST00000486506 BEND3Q5T5X7 828 aa9.1□□□□□ -0.95
MECP2-209ENST00000486506 SMIM5Q71RC9 77 aa9.1□□□□□ -0.95
MECP2-209ENST00000486506 EFCAB13Q8IY85 973 aa9.1□□□□□ -0.95
MECP2-209ENST00000486506 PROCA1Q8NCQ7 364 aaPredicted RBP9.1□□□□□ -0.95
MECP2-209ENST00000486506 SRCIN1Q9C0H9 1055 aa9.1□□□□□ -0.95
MECP2-209ENST00000486506 ZSCAN16Q9H4T2 348 aaPredicted RBP9.1□□□□□ -0.95
MECP2-209ENST00000486506 VEZTQ9HBM0 779 aa9.1□□□□□ -0.95
MECP2-209ENST00000486506 ATP5J2-PTCD1G3V325 749 aa9.1□□□□□ -0.95
MECP2-209ENST00000486506 KIF2AO00139 706 aaPredicted RBP9.1□□□□□ -0.95
MECP2-209ENST00000486506 MYBL2P10244 700 aa9.1□□□□□ -0.95
MECP2-209ENST00000486506 GRIK3Q13003 919 aa9.1□□□□□ -0.95
MECP2-209ENST00000486506 FBXO38Q6PIJ6 1188 aa9.1□□□□□ -0.95
MECP2-209ENST00000486506 GNL3LQ9NVN8 582 aaKnown RBP9.1□□□□□ -0.95
MECP2-209ENST00000486506 SKILP12757 684 aa9.09□□□□□ -0.95
MECP2-209ENST00000486506 TBC1D8BQ0IIM8 1120 aa9.09□□□□□ -0.95
MECP2-209ENST00000486506 TTLL5Q6EMB2 1281 aa9.09□□□□□ -0.95
MECP2-209ENST00000486506 LEKR1Q6ZMV7 388 aa9.09□□□□□ -0.95
MECP2-209ENST00000486506 SMARCE1Q969G3 411 aa9.09□□□□□ -0.95
MECP2-209ENST00000486506 MYD88Q99836 296 aa9.09□□□□□ -0.95
MECP2-209ENST00000486506 LNPKQ9C0E8 428 aa9.09□□□□□ -0.95
MECP2-209ENST00000486506 SPATS2LQ9NUQ6 558 aaKnown RBP9.09□□□□□ -0.95
MECP2-209ENST00000486506 CHCHD3Q9NX63 227 aaKnown RBP9.09□□□□□ -0.95
MECP2-209ENST00000486506 CCNL1Q9UK58 526 aaPredicted RBP9.09□□□□□ -0.95
MECP2-209ENST00000486506 ACTN2P35609 894 aa9.09□□□□□ -0.95
MECP2-209ENST00000486506 SLC5A9Q2M3M2 681 aa9.09□□□□□ -0.95
MECP2-209ENST00000486506 INTS5Q6P9B9 1019 aaKnown RBP9.09□□□□□ -0.95
MECP2-209ENST00000486506 LINC00116Q8NCU8 138 aa9.09□□□□□ -0.95
MECP2-209ENST00000486506 ACRBPQ8NEB7 543 aa9.09□□□□□ -0.95
MECP2-209ENST00000486506 EXOC4Q96A65 974 aa9.09□□□□□ -0.95
MECP2-209ENST00000486506 USP44Q9H0E7 712 aa9.09□□□□□ -0.95
MECP2-209ENST00000486506 ZNF232Q9UNY5 417 aa9.09□□□□□ -0.95
MECP2-209ENST00000486506 TBC1D2BQ9UPU7 963 aa9.09□□□□□ -0.95
MECP2-209ENST00000486506 FHOD1Q9Y613 1164 aa9.09□□□□□ -0.95
MECP2-209ENST00000486506 IGKV5-2P06315 115 aa9.08□□□□□ -0.96
MECP2-209ENST00000486506 NBPF7P0C2Y1 421 aaPredicted RBP9.08□□□□□ -0.96
MECP2-209ENST00000486506 RBBP5Q15291 538 aaKnown RBP9.08□□□□□ -0.96
MECP2-209ENST00000486506 TRIM6Q9C030 488 aaPredicted RBP9.08□□□□□ -0.96
MECP2-209ENST00000486506 CCDC87Q9NVE4 849 aa9.08□□□□□ -0.96
MECP2-209ENST00000486506 PCDHGA4Q9Y5G9 962 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms