RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 GGA3Q9NZ52 723 aa24.46■■□□□ 1.51
SNX5-213ENST00000486039 ADM5C9JUS6 153 aa24.45■■□□□ 1.5
SNX5-213ENST00000486039 EYA2O00167 538 aa24.45■■□□□ 1.5
SNX5-213ENST00000486039 PDE8BO95263 885 aa24.45■■□□□ 1.5
SNX5-213ENST00000486039 KIAA0825Q8IV33 1275 aa24.45■■□□□ 1.5
SNX5-213ENST00000486039 CERS5Q8N5B7 392 aa24.45■■□□□ 1.5
SNX5-213ENST00000486039 BEGAINQ9BUH8 593 aa24.45■■□□□ 1.5
SNX5-213ENST00000486039 HDAC5Q9UQL6 1122 aa24.45■■□□□ 1.5
SNX5-213ENST00000486039 ANGEL2Q5VTE6 544 aaKnown RBP24.44■■□□□ 1.5
SNX5-213ENST00000486039 ZKSCAN2Q63HK3 967 aa24.44■■□□□ 1.5
SNX5-213ENST00000486039 OGFOD1Q8N543 542 aa24.44■■□□□ 1.5
SNX5-213ENST00000486039 TDRD7Q8NHU6 1098 aaKnown RBP24.44■■□□□ 1.5
SNX5-213ENST00000486039 GNAI3P08754 354 aa24.43■■□□□ 1.5
SNX5-213ENST00000486039 HIBADHP31937 336 aaKnown RBP24.43■■□□□ 1.5
SNX5-213ENST00000486039 NBPF9Q3BBW0 867 aa24.43■■□□□ 1.5
SNX5-213ENST00000486039 ATG9AQ7Z3C6 839 aa24.43■■□□□ 1.5
SNX5-213ENST00000486039 JAG2Q9Y219 1238 aa24.43■■□□□ 1.5
SNX5-213ENST00000486039 SASH1O94885 1247 aa24.42■■□□□ 1.5
SNX5-213ENST00000486039 FBXO33Q7Z6M2 555 aa24.42■■□□□ 1.5
SNX5-213ENST00000486039 WNT10BO00744 389 aa24.41■■□□□ 1.5
SNX5-213ENST00000486039 FGFR2P21802 821 aa24.41■■□□□ 1.5
SNX5-213ENST00000486039 MMP14P50281 582 aa24.41■■□□□ 1.5
SNX5-213ENST00000486039 HUNKP57058 714 aa24.41■■□□□ 1.5
SNX5-213ENST00000486039 SULF1Q8IWU6 871 aa24.41■■□□□ 1.5
SNX5-213ENST00000486039 TMEM57Q8N5G2 664 aa24.41■■□□□ 1.5
SNX5-213ENST00000486039 POLR2AP24928 1970 aaKnown RBP24.41■■□□□ 1.5
SNX5-213ENST00000486039 FAM205AQ6ZU69 1335 aa24.4■■□□□ 1.5
SNX5-213ENST00000486039 FKBP1AP62942 108 aaKnown RBP24.4■■□□□ 1.5
SNX5-213ENST00000486039 SIL1Q9H173 461 aa24.4■■□□□ 1.5
SNX5-213ENST00000486039 GBA2Q9HCG7 927 aaPredicted RBP24.4■■□□□ 1.5
SNX5-213ENST00000486039 HDAC9Q9UKV0 1011 aa24.4■■□□□ 1.5
SNX5-213ENST00000486039 PA2G4Q9UQ80 394 aaKnown RBP24.4■■□□□ 1.5
SNX5-213ENST00000486039 PITPNM2Q9BZ72 1349 aa24.39■■□□□ 1.5
SNX5-213ENST00000486039 PUM3Q15397 648 aaKnown RBP24.39■■□□□ 1.49
SNX5-213ENST00000486039 C2orf69Q8N8R5 385 aa24.39■■□□□ 1.49
SNX5-213ENST00000486039 ZBED3Q96IU2 234 aaPredicted RBP24.39■■□□□ 1.49
SNX5-213ENST00000486039 FBXO3Q9UK99 471 aa24.39■■□□□ 1.49
SNX5-213ENST00000486039 SCAF8Q9UPN6 1271 aaKnown RBP24.39■■□□□ 1.49
SNX5-213ENST00000486039 F8W031 263 aaPredicted RBP24.38■■□□□ 1.49
SNX5-213ENST00000486039 CIAO1O76071 339 aa24.38■■□□□ 1.49
SNX5-213ENST00000486039 COPRSQ9NQ92 184 aa24.38■■□□□ 1.49
SNX5-213ENST00000486039 BCAMP50895 628 aa24.37■■□□□ 1.49
SNX5-213ENST00000486039 MTX1Q13505 466 aa24.37■■□□□ 1.49
SNX5-213ENST00000486039 CAVIN4Q5BKX8 364 aa24.37■■□□□ 1.49
SNX5-213ENST00000486039 VPS37DQ86XT2 251 aa24.37■■□□□ 1.49
SNX5-213ENST00000486039 CDCA5Q96FF9 252 aa24.37■■□□□ 1.49
SNX5-213ENST00000486039 IQSEC3Q9UPP2 1182 aaPredicted RBP24.37■■□□□ 1.49
SNX5-213ENST00000486039 IFIT1P09914 478 aaKnown RBP24.36■■□□□ 1.49
SNX5-213ENST00000486039 NOGQ13253 232 aa24.36■■□□□ 1.49
SNX5-213ENST00000486039 SRGAP3O43295 1099 aa24.35■■□□□ 1.49
SNX5-213ENST00000486039 CA12O43570 354 aa24.35■■□□□ 1.49
SNX5-213ENST00000486039 GNAI2P04899 355 aa24.35■■□□□ 1.49
SNX5-213ENST00000486039 RLBP1P12271 317 aa24.35■■□□□ 1.49
SNX5-213ENST00000486039 MFSD14BQ5SR56 506 aa24.35■■□□□ 1.49
SNX5-213ENST00000486039 RGMBQ6NW40 437 aa24.35■■□□□ 1.49
SNX5-213ENST00000486039 LPIN2Q92539 896 aa24.35■■□□□ 1.49
SNX5-213ENST00000486039 TSKSQ9UJT2 592 aa24.35■■□□□ 1.49
SNX5-213ENST00000486039 PCDHAC2Q9Y5I4 1007 aa24.35■■□□□ 1.49
SNX5-213ENST00000486039 IL15P40933 162 aaPredicted RBP24.34■■□□□ 1.49
SNX5-213ENST00000486039 DZIP1LQ8IYY4 767 aaKnown RBP24.34■■□□□ 1.49
SNX5-213ENST00000486039 MTMR14Q8NCE2 650 aa24.34■■□□□ 1.49
SNX5-213ENST00000486039 ZIC5Q96T25 663 aa24.34■■□□□ 1.49
SNX5-213ENST00000486039 CEP126Q9P2H0 1117 aa24.34■■□□□ 1.49
SNX5-213ENST00000486039 SLC5A1P13866 664 aa24.33■■□□□ 1.49
SNX5-213ENST00000486039 DLGAP5Q15398 846 aa24.33■■□□□ 1.49
SNX5-213ENST00000486039 FTSJ3Q8IY81 847 aaKnown RBP24.33■■□□□ 1.49
SNX5-213ENST00000486039 FAM155AB1AL88 458 aaPredicted RBP24.32■■□□□ 1.48
SNX5-213ENST00000486039 CHAF1AQ13111 956 aaPredicted RBP24.32■■□□□ 1.48
SNX5-213ENST00000486039 CFAP100Q494V2 611 aa24.32■■□□□ 1.48
SNX5-213ENST00000486039 PRAMEF18Q5VWM3 479 aa24.32■■□□□ 1.48
SNX5-213ENST00000486039 CCDC102AQ96A19 550 aa24.32■■□□□ 1.48
SNX5-213ENST00000486039 GRIK5Q16478 980 aa24.31■■□□□ 1.48
SNX5-213ENST00000486039 PRMT6Q96LA8 375 aaPredicted RBP24.31■■□□□ 1.48
SNX5-213ENST00000486039 PNMA6EA0A0J9YXQ4 647 aa24.3■■□□□ 1.48
SNX5-213ENST00000486039 FRAT2O75474 233 aaPredicted RBP24.3■■□□□ 1.48
SNX5-213ENST00000486039 ZNF157P51786 506 aaPredicted RBP24.3■■□□□ 1.48
SNX5-213ENST00000486039 ATP2B3Q16720 1220 aa24.3■■□□□ 1.48
SNX5-213ENST00000486039 TTF2Q9UNY4 1162 aaKnown RBP24.3■■□□□ 1.48
SNX5-213ENST00000486039 AOX1Q06278 1338 aa24.3■■□□□ 1.48
SNX5-213ENST00000486039 SPDYE2BA6NHP3 402 aa24.29■■□□□ 1.48
SNX5-213ENST00000486039 SPDYE6P0CI01 402 aa24.29■■□□□ 1.48
SNX5-213ENST00000486039 ITPRIPQ8IWB1 547 aa24.29■■□□□ 1.48
SNX5-213ENST00000486039 ABHD8Q96I13 439 aa24.29■■□□□ 1.48
SNX5-213ENST00000486039 ZBTB7BO15156 539 aaPredicted RBP24.28■■□□□ 1.48
SNX5-213ENST00000486039 APOBEC3FQ8IUX4 373 aaKnown RBP24.28■■□□□ 1.48
SNX5-213ENST00000486039 RBM5P52756 815 aaKnown RBP eCLIP24.27■■□□□ 1.48
SNX5-213ENST00000486039 FKBP1BP68106 108 aa24.27■■□□□ 1.48
SNX5-213ENST00000486039 KIF23Q02241 960 aaPredicted RBP24.27■■□□□ 1.48
SNX5-213ENST00000486039 TBC1D22AQ8WUA7 517 aa24.27■■□□□ 1.48
SNX5-213ENST00000486039 C1orf115Q9H7X2 142 aa24.27■■□□□ 1.48
SNX5-213ENST00000486039 SERPINA10Q9UK55 444 aa24.27■■□□□ 1.48
SNX5-213ENST00000486039 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.27■■□□□ 1.48
SNX5-213ENST00000486039 CLRN2A0PK11 232 aa24.26■■□□□ 1.47
SNX5-213ENST00000486039 SLC10A3P09131 477 aa24.26■■□□□ 1.47
SNX5-213ENST00000486039 TFCP2Q12800 502 aa24.26■■□□□ 1.47
SNX5-213ENST00000486039 PANK1Q8TE04 598 aa24.26■■□□□ 1.47
SNX5-213ENST00000486039 ARAP2Q8WZ64 1704 aa24.26■■□□□ 1.47
SNX5-213ENST00000486039 ADORA1P30542 326 aa24.25■■□□□ 1.47
SNX5-213ENST00000486039 TIMM10P62072 90 aa24.25■■□□□ 1.47
SNX5-213ENST00000486039 MOB2Q70IA6 237 aa24.25■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms