RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 SLC34A2O95436 690 aa17.71■□□□□ 0.43
VARS-226ENST00000483275 IFIT5Q13325 482 aaKnown RBP17.71■□□□□ 0.43
VARS-226ENST00000483275 BEND3Q5T5X7 828 aa17.71■□□□□ 0.43
VARS-226ENST00000483275 HDAC9Q9UKV0 1011 aa17.71■□□□□ 0.43
VARS-226ENST00000483275 HPS5Q9UPZ3 1129 aa17.71■□□□□ 0.43
VARS-226ENST00000483275 LAMB1P07942 1786 aa17.71■□□□□ 0.43
VARS-226ENST00000483275 DLGAP5Q15398 846 aa17.7■□□□□ 0.42
VARS-226ENST00000483275 LMBR1LQ6UX01 489 aa17.7■□□□□ 0.42
VARS-226ENST00000483275 CLMNQ96JQ2 1002 aa17.7■□□□□ 0.42
VARS-226ENST00000483275 CFAP100Q494V2 611 aa17.69■□□□□ 0.42
VARS-226ENST00000483275 ARMC9Q7Z3E5 817 aa17.69■□□□□ 0.42
VARS-226ENST00000483275 REM2Q8IYK8 340 aaPredicted RBP17.69■□□□□ 0.42
VARS-226ENST00000483275 DEFB129Q9H1M3 183 aa17.69■□□□□ 0.42
VARS-226ENST00000483275 COL1A1P02452 1464 aaPredicted RBP17.69■□□□□ 0.42
VARS-226ENST00000483275 ZEB1P37275 1124 aaPredicted RBP17.68■□□□□ 0.42
VARS-226ENST00000483275 SPRYD7Q5W111 196 aa17.68■□□□□ 0.42
VARS-226ENST00000483275 VEZTQ9HBM0 779 aa17.68■□□□□ 0.42
VARS-226ENST00000483275 CENPFP49454 3210 aa17.68■□□□□ 0.42
VARS-226ENST00000483275 GPR25O00155 361 aa17.67■□□□□ 0.42
VARS-226ENST00000483275 GRM8O00222 908 aa17.67■□□□□ 0.42
VARS-226ENST00000483275 TM4SF4P48230 202 aa17.67■□□□□ 0.42
VARS-226ENST00000483275 TAF7LQ5H9L4 462 aa17.67■□□□□ 0.42
VARS-226ENST00000483275 LDLRAD1Q5T700 205 aa17.67■□□□□ 0.42
VARS-226ENST00000483275 SLC4A10Q6U841 1118 aa17.67■□□□□ 0.42
VARS-226ENST00000483275 ZNF804AQ7Z570 1209 aa17.67■□□□□ 0.42
VARS-226ENST00000483275 SPDYE2BA6NHP3 402 aa17.66■□□□□ 0.42
VARS-226ENST00000483275 SPDYE6P0CI01 402 aa17.66■□□□□ 0.42
VARS-226ENST00000483275 IL1R1P14778 569 aa17.66■□□□□ 0.42
VARS-226ENST00000483275 SREBF2Q12772 1141 aa17.66■□□□□ 0.42
VARS-226ENST00000483275 WDR63Q8IWG1 891 aa17.66■□□□□ 0.42
VARS-226ENST00000483275 PRMT6Q96LA8 375 aaPredicted RBP17.66■□□□□ 0.42
VARS-226ENST00000483275 CNNM1Q9NRU3 951 aa17.66■□□□□ 0.42
VARS-226ENST00000483275 RBM5P52756 815 aaKnown RBP eCLIP17.65■□□□□ 0.42
VARS-226ENST00000483275 CCDC57Q2TAC2 916 aa17.65■□□□□ 0.42
VARS-226ENST00000483275 NBPF12Q5TAG4 269 aaPredicted RBP17.65■□□□□ 0.42
VARS-226ENST00000483275 LDHAL6AQ6ZMR3 332 aa17.65■□□□□ 0.42
VARS-226ENST00000483275 C15orf52Q6ZUT6 534 aaKnown RBP17.65■□□□□ 0.42
VARS-226ENST00000483275 PUS3Q9BZE2 481 aaKnown RBP17.65■□□□□ 0.42
VARS-226ENST00000483275 GYG1P46976 350 aa17.64■□□□□ 0.41
VARS-226ENST00000483275 CDAN1Q8IWY9 1227 aa17.64■□□□□ 0.41
VARS-226ENST00000483275 SUCLG2Q96I99 432 aa17.64■□□□□ 0.41
VARS-226ENST00000483275 WNK4Q96J92 1243 aa17.64■□□□□ 0.41
VARS-226ENST00000483275 C9orf78Q9NZ63 289 aaPredicted RBP17.64■□□□□ 0.41
VARS-226ENST00000483275 IGF2BP3O00425 579 aaKnown RBP eCLIP17.63■□□□□ 0.41
VARS-226ENST00000483275 ANP32CO43423 234 aa17.63■□□□□ 0.41
VARS-226ENST00000483275 FKTNO75072 461 aa17.63■□□□□ 0.41
VARS-226ENST00000483275 GJA5P36382 358 aa17.63■□□□□ 0.41
VARS-226ENST00000483275 FAM9BQ8IZU0 186 aa17.63■□□□□ 0.41
VARS-226ENST00000483275 MTMR14Q8NCE2 650 aa17.63■□□□□ 0.41
VARS-226ENST00000483275 SLC10A4Q96EP9 437 aa17.63■□□□□ 0.41
VARS-226ENST00000483275 IQSEC3Q9UPP2 1182 aaPredicted RBP17.63■□□□□ 0.41
VARS-226ENST00000483275 MMP14P50281 582 aa17.62■□□□□ 0.41
VARS-226ENST00000483275 MFSD14BQ5SR56 506 aa17.62■□□□□ 0.41
VARS-226ENST00000483275 KAZALD1Q96I82 304 aa17.62■□□□□ 0.41
VARS-226ENST00000483275 MYH13Q9UKX3 1938 aa17.62■□□□□ 0.41
VARS-226ENST00000483275 MKI67P46013 3256 aaKnown RBP17.62■□□□□ 0.41
VARS-226ENST00000483275 MYO1BO43795 1136 aa17.61■□□□□ 0.41
VARS-226ENST00000483275 RASA3Q14644 834 aa17.61■□□□□ 0.41
VARS-226ENST00000483275 GRIK5Q16478 980 aa17.61■□□□□ 0.41
VARS-226ENST00000483275 NCBP3Q53F19 620 aaKnown RBP17.61■□□□□ 0.41
VARS-226ENST00000483275 IFNL1Q8IU54 200 aa17.61■□□□□ 0.41
VARS-226ENST00000483275 NBPF7P0C2Y1 421 aaPredicted RBP17.6■□□□□ 0.41
VARS-226ENST00000483275 PKN2Q16513 984 aaKnown RBP17.6■□□□□ 0.41
VARS-226ENST00000483275 MAP3K11Q16584 847 aa17.6■□□□□ 0.41
VARS-226ENST00000483275 FBXO46Q6PJ61 603 aaPredicted RBP17.6■□□□□ 0.41
VARS-226ENST00000483275 SRCIN1Q9C0H9 1055 aa17.6■□□□□ 0.41
VARS-226ENST00000483275 TDRD3Q9H7E2 651 aaKnown RBP17.6■□□□□ 0.41
VARS-226ENST00000483275 TTF2Q9UNY4 1162 aaKnown RBP17.6■□□□□ 0.41
VARS-226ENST00000483275 PPP2R3BQ9Y5P8 575 aa17.6■□□□□ 0.41
VARS-226ENST00000483275 ZSWIM8A7E2V4 1837 aa17.6■□□□□ 0.41
VARS-226ENST00000483275 FAM205AQ6ZU69 1335 aa17.59■□□□□ 0.41
VARS-226ENST00000483275 MANSC4A6NHS7 340 aaPredicted RBP17.59■□□□□ 0.41
VARS-226ENST00000483275 PPP1R12BO60237 982 aaPredicted RBP17.59■□□□□ 0.41
VARS-226ENST00000483275 FKBP1AP62942 108 aaKnown RBP17.59■□□□□ 0.41
VARS-226ENST00000483275 CHAF1AQ13111 956 aaPredicted RBP17.59■□□□□ 0.41
VARS-226ENST00000483275 CNKSR2Q8WXI2 1034 aa17.59■□□□□ 0.41
VARS-226ENST00000483275 BICC1Q9H694 974 aaKnown RBP17.59■□□□□ 0.41
VARS-226ENST00000483275 ELP3Q9H9T3 547 aa17.59■□□□□ 0.41
VARS-226ENST00000483275 ZNF70Q9UC06 446 aaPredicted RBP17.59■□□□□ 0.41
VARS-226ENST00000483275 BRCA2P51587 3418 aa17.59■□□□□ 0.41
VARS-226ENST00000483275 TCP10L2B9ZVM9 353 aa17.58■□□□□ 0.4
VARS-226ENST00000483275 USP2O75604 605 aaPredicted RBP17.58■□□□□ 0.4
VARS-226ENST00000483275 ALDH1L1O75891 902 aa17.58■□□□□ 0.4
VARS-226ENST00000483275 CACNB3P54284 484 aa17.58■□□□□ 0.4
VARS-226ENST00000483275 SUPT20HL1Q3ZLR7 823 aa17.58■□□□□ 0.4
VARS-226ENST00000483275 LRRC24Q50LG9 513 aa17.58■□□□□ 0.4
VARS-226ENST00000483275 NOM1Q5C9Z4 860 aaKnown RBP17.58■□□□□ 0.4
VARS-226ENST00000483275 TDRD7Q8NHU6 1098 aaKnown RBP17.58■□□□□ 0.4
VARS-226ENST00000483275 FAM84BQ96KN1 310 aaPredicted RBP17.58■□□□□ 0.4
VARS-226ENST00000483275 CFHR5Q9BXR6 569 aa17.58■□□□□ 0.4
VARS-226ENST00000483275 ZBTB48P10074 688 aaPredicted RBP17.57■□□□□ 0.4
VARS-226ENST00000483275 HIBADHP31937 336 aaKnown RBP17.57■□□□□ 0.4
VARS-226ENST00000483275 IREB2P48200 963 aaKnown RBP17.57■□□□□ 0.4
VARS-226ENST00000483275 CAP1Q01518 475 aa17.57■□□□□ 0.4
VARS-226ENST00000483275 CRHR2Q13324 411 aa17.57■□□□□ 0.4
VARS-226ENST00000483275 SPDYE2Q495Y8 402 aa17.57■□□□□ 0.4
VARS-226ENST00000483275 KLHDC4Q8TBB5 520 aa17.57■□□□□ 0.4
VARS-226ENST00000483275 CD99L2Q8TCZ2 262 aa17.57■□□□□ 0.4
VARS-226ENST00000483275 TMEM39BQ9GZU3 492 aa17.57■□□□□ 0.4
VARS-226ENST00000483275 TRIM17Q9Y577 477 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms