RNA–Protein interactions for RNA: ENST00000479539.1

SP140-210, Transcript of SP140 nuclear body protein, humanhuman

TSL 5

Gene SP140, Length 550 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-210ENST00000479539 FAM205AQ6ZU69 1335 aa13.14□□□□□ -0.31
SP140-210ENST00000479539 GNAI2P04899 355 aa13.14□□□□□ -0.31
SP140-210ENST00000479539 PUM3Q15397 648 aaKnown RBP13.14□□□□□ -0.31
SP140-210ENST00000479539 KRT26Q7Z3Y9 468 aa13.14□□□□□ -0.31
SP140-210ENST00000479539 DZIP1LQ8IYY4 767 aaKnown RBP13.14□□□□□ -0.31
SP140-210ENST00000479539 CERS5Q8N5B7 392 aa13.14□□□□□ -0.31
SP140-210ENST00000479539 CNTNAP1P78357 1384 aa13.14□□□□□ -0.31
SP140-210ENST00000479539 ASTN2O75129 1339 aaPredicted RBP13.13□□□□□ -0.31
SP140-210ENST00000479539 CELF2O95319 508 aaKnown RBP13.13□□□□□ -0.31
SP140-210ENST00000479539 RLBP1P12271 317 aa13.13□□□□□ -0.31
SP140-210ENST00000479539 IL15P40933 162 aaPredicted RBP13.13□□□□□ -0.31
SP140-210ENST00000479539 CAVIN4Q5BKX8 364 aa13.13□□□□□ -0.31
SP140-210ENST00000479539 KIAA0825Q8IV33 1275 aa13.13□□□□□ -0.31
SP140-210ENST00000479539 LPIN2Q92539 896 aa13.13□□□□□ -0.31
SP140-210ENST00000479539 ZBED3Q96IU2 234 aaPredicted RBP13.13□□□□□ -0.31
SP140-210ENST00000479539 GGA3Q9NZ52 723 aa13.13□□□□□ -0.31
SP140-210ENST00000479539 HDAC9Q9UKV0 1011 aa13.13□□□□□ -0.31
SP140-210ENST00000479539 SCN9AQ15858 1988 aa13.12□□□□□ -0.31
SP140-210ENST00000479539 WNT10BO00744 389 aa13.12□□□□□ -0.31
SP140-210ENST00000479539 ZBTB7BO15156 539 aaPredicted RBP13.12□□□□□ -0.31
SP140-210ENST00000479539 SRGAP3O43295 1099 aa13.12□□□□□ -0.31
SP140-210ENST00000479539 IFIT1P09914 478 aaKnown RBP13.12□□□□□ -0.31
SP140-210ENST00000479539 DEFB115Q30KQ5 88 aa13.12□□□□□ -0.31
SP140-210ENST00000479539 NBPF9Q3BBW0 867 aa13.12□□□□□ -0.31
SP140-210ENST00000479539 ANGEL2Q5VTE6 544 aaKnown RBP13.12□□□□□ -0.31
SP140-210ENST00000479539 DLK2Q6UY11 383 aa13.12□□□□□ -0.31
SP140-210ENST00000479539 SULF1Q8IWU6 871 aa13.12□□□□□ -0.31
SP140-210ENST00000479539 FTSJ3Q8IY81 847 aaKnown RBP13.12□□□□□ -0.31
SP140-210ENST00000479539 MTMR14Q8NCE2 650 aa13.12□□□□□ -0.31
SP140-210ENST00000479539 SIL1Q9H173 461 aa13.12□□□□□ -0.31
SP140-210ENST00000479539 CEP126Q9P2H0 1117 aa13.12□□□□□ -0.31
SP140-210ENST00000479539 ABT1Q9ULW3 272 aaKnown RBP13.12□□□□□ -0.31
SP140-210ENST00000479539 PA2G4Q9UQ80 394 aaKnown RBP13.12□□□□□ -0.31
SP140-210ENST00000479539 TLL2Q9Y6L7 1015 aa13.12□□□□□ -0.31
SP140-210ENST00000479539 PITPNM2Q9BZ72 1349 aa13.12□□□□□ -0.31
SP140-210ENST00000479539 ADM5C9JUS6 153 aa13.11□□□□□ -0.31
SP140-210ENST00000479539 VEGFBP49765 207 aa13.11□□□□□ -0.31
SP140-210ENST00000479539 BCAMP50895 628 aa13.11□□□□□ -0.31
SP140-210ENST00000479539 SAPCD2Q86UD0 394 aa13.11□□□□□ -0.31
SP140-210ENST00000479539 VPS37DQ86XT2 251 aa13.11□□□□□ -0.31
SP140-210ENST00000479539 JAG2Q9Y219 1238 aa13.11□□□□□ -0.31
SP140-210ENST00000479539 SLC5A1P13866 664 aa13.1□□□□□ -0.31
SP140-210ENST00000479539 MFSD14BQ5SR56 506 aa13.1□□□□□ -0.31
SP140-210ENST00000479539 PNMA6EA0A0J9YXQ4 647 aa13.09□□□□□ -0.31
SP140-210ENST00000479539 ATP8B2P98198 1209 aa13.09□□□□□ -0.31
SP140-210ENST00000479539 DLGAP5Q15398 846 aa13.09□□□□□ -0.31
SP140-210ENST00000479539 ATP2B3Q16720 1220 aa13.09□□□□□ -0.31
SP140-210ENST00000479539 ITPRIPQ8IWB1 547 aa13.09□□□□□ -0.31
SP140-210ENST00000479539 HHIPL1Q96JK4 782 aa13.09□□□□□ -0.31
SP140-210ENST00000479539 ZNF408Q9H9D4 720 aa13.09□□□□□ -0.31
SP140-210ENST00000479539 F8W031 263 aaPredicted RBP13.08□□□□□ -0.32
SP140-210ENST00000479539 MS4A1P11836 297 aa13.08□□□□□ -0.32
SP140-210ENST00000479539 CFAP100Q494V2 611 aa13.08□□□□□ -0.32
SP140-210ENST00000479539 PANK1Q8TE04 598 aa13.08□□□□□ -0.32
SP140-210ENST00000479539 TBC1D22AQ8WUA7 517 aa13.08□□□□□ -0.32
SP140-210ENST00000479539 CDCA5Q96FF9 252 aa13.08□□□□□ -0.32
SP140-210ENST00000479539 RCAN3Q9UKA8 241 aa13.08□□□□□ -0.32
SP140-210ENST00000479539 IQSEC3Q9UPP2 1182 aaPredicted RBP13.08□□□□□ -0.32
SP140-210ENST00000479539 WDR33Q9C0J8 1336 aaKnown RBP13.08□□□□□ -0.32
SP140-210ENST00000479539 SPDYE2BA6NHP3 402 aa13.07□□□□□ -0.32
SP140-210ENST00000479539 FRAT2O75474 233 aaPredicted RBP13.07□□□□□ -0.32
SP140-210ENST00000479539 SPDYE6P0CI01 402 aa13.07□□□□□ -0.32
SP140-210ENST00000479539 ECE1P42892 770 aa13.07□□□□□ -0.32
SP140-210ENST00000479539 C2orf69Q8N8R5 385 aa13.07□□□□□ -0.32
SP140-210ENST00000479539 SSH3Q8TE77 659 aa13.07□□□□□ -0.32
SP140-210ENST00000479539 CAPNS2Q96L46 248 aa13.07□□□□□ -0.32
SP140-210ENST00000479539 PRMT6Q96LA8 375 aaPredicted RBP13.07□□□□□ -0.32
SP140-210ENST00000479539 MRIQ9BWK5 157 aa13.07□□□□□ -0.32
SP140-210ENST00000479539 GBA2Q9HCG7 927 aaPredicted RBP13.07□□□□□ -0.32
SP140-210ENST00000479539 SERPINA10Q9UK55 444 aa13.07□□□□□ -0.32
SP140-210ENST00000479539 TTF2Q9UNY4 1162 aaKnown RBP13.07□□□□□ -0.32
SP140-210ENST00000479539 PCDHAC2Q9Y5I4 1007 aa13.07□□□□□ -0.32
SP140-210ENST00000479539 PCNTO95613 3336 aa13.06□□□□□ -0.32
SP140-210ENST00000479539 HUNKP57058 714 aa13.06□□□□□ -0.32
SP140-210ENST00000479539 FKBP1BP68106 108 aa13.06□□□□□ -0.32
SP140-210ENST00000479539 TFCP2Q12800 502 aa13.06□□□□□ -0.32
SP140-210ENST00000479539 CHAF1AQ13111 956 aaPredicted RBP13.06□□□□□ -0.32
SP140-210ENST00000479539 G3BP1Q13283 466 aaKnown RBP eCLIP13.06□□□□□ -0.32
SP140-210ENST00000479539 GRIK5Q16478 980 aa13.06□□□□□ -0.32
SP140-210ENST00000479539 CYP4F22Q6NT55 531 aa13.06□□□□□ -0.32
SP140-210ENST00000479539 APOBEC3FQ8IUX4 373 aaKnown RBP13.06□□□□□ -0.32
SP140-210ENST00000479539 GNL3LQ9NVN8 582 aaKnown RBP13.06□□□□□ -0.32
SP140-210ENST00000479539 SCAF8Q9UPN6 1271 aaKnown RBP13.06□□□□□ -0.32
SP140-210ENST00000479539 AKAP2Q9Y2D5 859 aa13.06□□□□□ -0.32
SP140-210ENST00000479539 SUGT1Q9Y2Z0 365 aa13.06□□□□□ -0.32
SP140-210ENST00000479539 SPEF2Q9C093 1822 aa13.06□□□□□ -0.32
SP140-210ENST00000479539 HSPA1AP0DMV8 641 aaKnown RBP13.05□□□□□ -0.32
SP140-210ENST00000479539 HSPA1BP0DMV9 641 aaKnown RBP13.05□□□□□ -0.32
SP140-210ENST00000479539 TIMM10P62072 90 aa13.05□□□□□ -0.32
SP140-210ENST00000479539 HDLBPQ00341 1268 aaKnown RBP13.05□□□□□ -0.32
SP140-210ENST00000479539 MKRN4PQ13434 485 aaPredicted RBP13.05□□□□□ -0.32
SP140-210ENST00000479539 WDR66Q8TBY9 1149 aa13.05□□□□□ -0.32
SP140-210ENST00000479539 C1orf115Q9H7X2 142 aa13.05□□□□□ -0.32
SP140-210ENST00000479539 WBP1LQ9NX94 342 aa13.05□□□□□ -0.32
SP140-210ENST00000479539 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.05□□□□□ -0.32
SP140-210ENST00000479539 A0A1B0GUL7 405 aa13.04□□□□□ -0.32
SP140-210ENST00000479539 SEMA3EO15041 775 aa13.04□□□□□ -0.32
SP140-210ENST00000479539 MYO1BO43795 1136 aa13.04□□□□□ -0.32
SP140-210ENST00000479539 ADORA1P30542 326 aa13.04□□□□□ -0.32
SP140-210ENST00000479539 MAP2K2P36507 400 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms