RNA–Protein interactions for RNA: ENST00000479064.5

HPS4-211, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-211ENST00000479064 ANKRD44Q8N8A2 993 aa24.96■■□□□ 1.59
HPS4-211ENST00000479064 USP44Q9H0E7 712 aa24.96■■□□□ 1.59
HPS4-211ENST00000479064 SMC4Q9NTJ3 1288 aa24.96■■□□□ 1.59
HPS4-211ENST00000479064 FAM205AQ6ZU69 1335 aa24.95■■□□□ 1.58
HPS4-211ENST00000479064 AKAP11Q9UKA4 1901 aa24.95■■□□□ 1.58
HPS4-211ENST00000479064 PLIN1O60240 522 aa24.95■■□□□ 1.58
HPS4-211ENST00000479064 CERS5Q8N5B7 392 aa24.95■■□□□ 1.58
HPS4-211ENST00000479064 NF2P35240 595 aa24.94■■□□□ 1.58
HPS4-211ENST00000479064 TDRD7Q8NHU6 1098 aaKnown RBP24.94■■□□□ 1.58
HPS4-211ENST00000479064 PUS3Q9BZE2 481 aaKnown RBP24.94■■□□□ 1.58
HPS4-211ENST00000479064 SAGE1Q9NXZ1 904 aa24.94■■□□□ 1.58
HPS4-211ENST00000479064 DLGAP5Q15398 846 aa24.93■■□□□ 1.58
HPS4-211ENST00000479064 ZIC5Q96T25 663 aa24.93■■□□□ 1.58
HPS4-211ENST00000479064 ARAP2Q8WZ64 1704 aa24.92■■□□□ 1.58
HPS4-211ENST00000479064 HIBADHP31937 336 aaKnown RBP24.92■■□□□ 1.58
HPS4-211ENST00000479064 KIF23Q02241 960 aaPredicted RBP24.91■■□□□ 1.58
HPS4-211ENST00000479064 FAM84BQ96KN1 310 aaPredicted RBP24.91■■□□□ 1.58
HPS4-211ENST00000479064 CAPN15O75808 1086 aa24.9■■□□□ 1.58
HPS4-211ENST00000479064 RASAL3Q86YV0 1011 aa24.9■■□□□ 1.58
HPS4-211ENST00000479064 API5Q9BZZ5 524 aaKnown RBP24.9■■□□□ 1.58
HPS4-211ENST00000479064 PPP2R3BQ9Y5P8 575 aa24.9■■□□□ 1.58
HPS4-211ENST00000479064 KIF16BQ96L93 1317 aa24.89■■□□□ 1.58
HPS4-211ENST00000479064 CASP8AP2Q9UKL3 1982 aa24.89■■□□□ 1.58
HPS4-211ENST00000479064 MYO1BO43795 1136 aa24.89■■□□□ 1.58
HPS4-211ENST00000479064 PDE8BO95263 885 aa24.89■■□□□ 1.58
HPS4-211ENST00000479064 VGLL2Q8N8G2 317 aa24.89■■□□□ 1.58
HPS4-211ENST00000479064 HDAC5Q9UQL6 1122 aa24.89■■□□□ 1.58
HPS4-211ENST00000479064 SPDYE2BA6NHP3 402 aa24.88■■□□□ 1.57
HPS4-211ENST00000479064 SPDYE6P0CI01 402 aa24.88■■□□□ 1.57
HPS4-211ENST00000479064 GYG1P46976 350 aa24.88■■□□□ 1.57
HPS4-211ENST00000479064 CFAP100Q494V2 611 aa24.88■■□□□ 1.57
HPS4-211ENST00000479064 LRRC24Q50LG9 513 aa24.88■■□□□ 1.57
HPS4-211ENST00000479064 METTL24Q5JXM2 366 aa24.88■■□□□ 1.57
HPS4-211ENST00000479064 FBXO33Q7Z6M2 555 aa24.88■■□□□ 1.57
HPS4-211ENST00000479064 MFSD14BQ5SR56 506 aa24.87■■□□□ 1.57
HPS4-211ENST00000479064 TSKSQ9UJT2 592 aa24.87■■□□□ 1.57
HPS4-211ENST00000479064 FBXO3Q9UK99 471 aa24.87■■□□□ 1.57
HPS4-211ENST00000479064 SCAF8Q9UPN6 1271 aaKnown RBP24.87■■□□□ 1.57
HPS4-211ENST00000479064 CAVIN4Q5BKX8 364 aa24.86■■□□□ 1.57
HPS4-211ENST00000479064 PRAMEF18Q5VWM3 479 aa24.86■■□□□ 1.57
HPS4-211ENST00000479064 ARMC9Q7Z3E5 817 aa24.86■■□□□ 1.57
HPS4-211ENST00000479064 VPS37DQ86XT2 251 aa24.86■■□□□ 1.57
HPS4-211ENST00000479064 ARHGAP45Q92619 1136 aa24.86■■□□□ 1.57
HPS4-211ENST00000479064 CSRNP1Q96S65 589 aa24.86■■□□□ 1.57
HPS4-211ENST00000479064 DEFB129Q9H1M3 183 aa24.86■■□□□ 1.57
HPS4-211ENST00000479064 SERPINA10Q9UK55 444 aa24.86■■□□□ 1.57
HPS4-211ENST00000479064 NOB1Q9ULX3 412 aaKnown RBP24.86■■□□□ 1.57
HPS4-211ENST00000479064 F8W031 263 aaPredicted RBP24.85■■□□□ 1.57
HPS4-211ENST00000479064 TTLL12Q14166 644 aaPredicted RBP24.85■■□□□ 1.57
HPS4-211ENST00000479064 TBC1D22AQ8WUA7 517 aa24.85■■□□□ 1.57
HPS4-211ENST00000479064 UNCXA6NJT0 531 aa24.84■■□□□ 1.57
HPS4-211ENST00000479064 UBE2Q2LH0YL09 131 aa24.84■■□□□ 1.57
HPS4-211ENST00000479064 UBTFL1P0CB47 393 aaPredicted RBP24.84■■□□□ 1.57
HPS4-211ENST00000479064 RFX5P48382 616 aaPredicted RBP24.84■■□□□ 1.57
HPS4-211ENST00000479064 RARSP54136 660 aaKnown RBP24.84■■□□□ 1.57
HPS4-211ENST00000479064 MOB2Q70IA6 237 aa24.84■■□□□ 1.57
HPS4-211ENST00000479064 ABHD8Q96I13 439 aa24.84■■□□□ 1.57
HPS4-211ENST00000479064 PRMT6Q96LA8 375 aaPredicted RBP24.84■■□□□ 1.57
HPS4-211ENST00000479064 EYA2O00167 538 aa24.83■■□□□ 1.57
HPS4-211ENST00000479064 PUM3Q15397 648 aaKnown RBP24.83■■□□□ 1.57
HPS4-211ENST00000479064 MAP3K11Q16584 847 aa24.83■■□□□ 1.57
HPS4-211ENST00000479064 RNF186Q9NXI6 227 aa24.83■■□□□ 1.57
HPS4-211ENST00000479064 TTF2Q9UNY4 1162 aaKnown RBP24.83■■□□□ 1.57
HPS4-211ENST00000479064 JAG2Q9Y219 1238 aa24.83■■□□□ 1.57
HPS4-211ENST00000479064 IFIT1P09914 478 aaKnown RBP24.82■■□□□ 1.56
HPS4-211ENST00000479064 FGFR2P21802 821 aa24.82■■□□□ 1.56
HPS4-211ENST00000479064 HDLBPQ00341 1268 aaKnown RBP24.82■■□□□ 1.56
HPS4-211ENST00000479064 PTPN12Q05209 780 aaKnown RBP24.82■■□□□ 1.56
HPS4-211ENST00000479064 TNFAIP1Q13829 316 aa24.82■■□□□ 1.56
HPS4-211ENST00000479064 SUPT20HL1Q3ZLR7 823 aa24.82■■□□□ 1.56
HPS4-211ENST00000479064 LDLRAD1Q5T700 205 aa24.82■■□□□ 1.56
HPS4-211ENST00000479064 KLHDC4Q8TBB5 520 aa24.82■■□□□ 1.56
HPS4-211ENST00000479064 SUGT1Q9Y2Z0 365 aa24.81■■□□□ 1.56
HPS4-211ENST00000479064 CIAO1O76071 339 aa24.8■■□□□ 1.56
HPS4-211ENST00000479064 RBM5P52756 815 aaKnown RBP eCLIP24.8■■□□□ 1.56
HPS4-211ENST00000479064 MRIQ9BWK5 157 aa24.8■■□□□ 1.56
HPS4-211ENST00000479064 PCDHAC2Q9Y5I4 1007 aa24.8■■□□□ 1.56
HPS4-211ENST00000479064 MYH13Q9UKX3 1938 aa24.8■■□□□ 1.56
HPS4-211ENST00000479064 PPP1R12BO60237 982 aaPredicted RBP24.79■■□□□ 1.56
HPS4-211ENST00000479064 TRPA1O75762 1119 aa24.79■■□□□ 1.56
HPS4-211ENST00000479064 SPDYE2Q495Y8 402 aa24.79■■□□□ 1.56
HPS4-211ENST00000479064 LPIN2Q92539 896 aa24.79■■□□□ 1.56
HPS4-211ENST00000479064 LAMB1P07942 1786 aa24.78■■□□□ 1.56
HPS4-211ENST00000479064 CLRN2A0PK11 232 aa24.78■■□□□ 1.56
HPS4-211ENST00000479064 FRAT2O75474 233 aaPredicted RBP24.78■■□□□ 1.56
HPS4-211ENST00000479064 TM4SF4P48230 202 aa24.78■■□□□ 1.56
HPS4-211ENST00000479064 INTS3Q68E01 1043 aaKnown RBP24.78■■□□□ 1.56
HPS4-211ENST00000479064 VEZTQ9HBM0 779 aa24.78■■□□□ 1.56
HPS4-211ENST00000479064 ANGEL1Q9UNK9 670 aaKnown RBP24.78■■□□□ 1.56
HPS4-211ENST00000479064 SSC5DA1L4H1 1573 aa24.77■■□□□ 1.56
HPS4-211ENST00000479064 SLC5A1P13866 664 aa24.77■■□□□ 1.56
HPS4-211ENST00000479064 ATG9AQ7Z3C6 839 aa24.77■■□□□ 1.56
HPS4-211ENST00000479064 DZIP1LQ8IYY4 767 aaKnown RBP24.77■■□□□ 1.56
HPS4-211ENST00000479064 ZBTB22O15209 634 aa24.76■■□□□ 1.55
HPS4-211ENST00000479064 IPO8O15397 1037 aaKnown RBP24.76■■□□□ 1.55
HPS4-211ENST00000479064 CRKP46108 304 aa24.76■■□□□ 1.55
HPS4-211ENST00000479064 BCAMP50895 628 aa24.76■■□□□ 1.55
HPS4-211ENST00000479064 SREBF2Q12772 1141 aa24.76■■□□□ 1.55
HPS4-211ENST00000479064 ZNF70Q9UC06 446 aaPredicted RBP24.76■■□□□ 1.55
HPS4-211ENST00000479064 MAST3O60307 1309 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms