RNA–Protein interactions for RNA: ENST00000477477.1

HDLBP-236, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 340 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-236ENST00000477477 DLGAP5Q15398 846 aa14.38□□□□□ -0.11
HDLBP-236ENST00000477477 ARMC9Q7Z3E5 817 aa14.38□□□□□ -0.11
HDLBP-236ENST00000477477 MTMR14Q8NCE2 650 aa14.38□□□□□ -0.11
HDLBP-236ENST00000477477 SUCLG2Q96I99 432 aa14.38□□□□□ -0.11
HDLBP-236ENST00000477477 CNNM1Q9NRU3 951 aa14.38□□□□□ -0.11
HDLBP-236ENST00000477477 PLIN1O60240 522 aa14.37□□□□□ -0.11
HDLBP-236ENST00000477477 DEFB129Q9H1M3 183 aa14.37□□□□□ -0.11
HDLBP-236ENST00000477477 F8W031 263 aaPredicted RBP14.36□□□□□ -0.11
HDLBP-236ENST00000477477 MLLT1Q03111 559 aaPredicted RBP14.36□□□□□ -0.11
HDLBP-236ENST00000477477 PTPN12Q05209 780 aaKnown RBP14.36□□□□□ -0.11
HDLBP-236ENST00000477477 PRKG1Q13976 671 aa14.36□□□□□ -0.11
HDLBP-236ENST00000477477 UBE4AQ14139 1066 aa14.36□□□□□ -0.11
HDLBP-236ENST00000477477 CFAP100Q494V2 611 aa14.36□□□□□ -0.11
HDLBP-236ENST00000477477 KAZALD1Q96I82 304 aa14.36□□□□□ -0.11
HDLBP-236ENST00000477477 JAG2Q9Y219 1238 aa14.36□□□□□ -0.11
HDLBP-236ENST00000477477 PCDHAC2Q9Y5I4 1007 aa14.36□□□□□ -0.11
HDLBP-236ENST00000477477 PPP2R3BQ9Y5P8 575 aa14.36□□□□□ -0.11
HDLBP-236ENST00000477477 UTYO14607 1347 aa14.36□□□□□ -0.11
HDLBP-236ENST00000477477 SSC5DA1L4H1 1573 aa14.35□□□□□ -0.11
HDLBP-236ENST00000477477 AKAP11Q9UKA4 1901 aa14.35□□□□□ -0.11
HDLBP-236ENST00000477477 SPDYE2BA6NHP3 402 aa14.35□□□□□ -0.11
HDLBP-236ENST00000477477 NBPF7P0C2Y1 421 aaPredicted RBP14.35□□□□□ -0.11
HDLBP-236ENST00000477477 SPDYE6P0CI01 402 aa14.35□□□□□ -0.11
HDLBP-236ENST00000477477 TM4SF4P48230 202 aa14.35□□□□□ -0.11
HDLBP-236ENST00000477477 MKRN3Q13064 507 aaKnown RBP14.35□□□□□ -0.11
HDLBP-236ENST00000477477 LDLRAD1Q5T700 205 aa14.35□□□□□ -0.11
HDLBP-236ENST00000477477 CTU1Q7Z7A3 348 aaKnown RBP14.35□□□□□ -0.11
HDLBP-236ENST00000477477 MRPL50Q8N5N7 158 aaKnown RBP14.35□□□□□ -0.11
HDLBP-236ENST00000477477 PUS3Q9BZE2 481 aaKnown RBP14.35□□□□□ -0.11
HDLBP-236ENST00000477477 ANGEL1Q9UNK9 670 aaKnown RBP14.35□□□□□ -0.11
HDLBP-236ENST00000477477 FAM205AQ6ZU69 1335 aa14.35□□□□□ -0.11
HDLBP-236ENST00000477477 CLRN2A0PK11 232 aa14.34□□□□□ -0.11
HDLBP-236ENST00000477477 MYO1BO43795 1136 aa14.34□□□□□ -0.11
HDLBP-236ENST00000477477 SREBF2Q12772 1141 aa14.34□□□□□ -0.11
HDLBP-236ENST00000477477 RABL6Q3YEC7 729 aaPredicted RBP14.34□□□□□ -0.11
HDLBP-236ENST00000477477 TDRD7Q8NHU6 1098 aaKnown RBP14.34□□□□□ -0.11
HDLBP-236ENST00000477477 PRMT6Q96LA8 375 aaPredicted RBP14.34□□□□□ -0.11
HDLBP-236ENST00000477477 BICC1Q9H694 974 aaKnown RBP14.34□□□□□ -0.11
HDLBP-236ENST00000477477 FZD1Q9UP38 647 aa14.34□□□□□ -0.11
HDLBP-236ENST00000477477 AOX1Q06278 1338 aa14.34□□□□□ -0.11
HDLBP-236ENST00000477477 E9PSI1 815 aa14.33□□□□□ -0.12
HDLBP-236ENST00000477477 TBC1D8O95759 1140 aa14.33□□□□□ -0.12
HDLBP-236ENST00000477477 HIBADHP31937 336 aaKnown RBP14.33□□□□□ -0.12
HDLBP-236ENST00000477477 GYG1P46976 350 aa14.33□□□□□ -0.12
HDLBP-236ENST00000477477 MAP3K11Q16584 847 aa14.33□□□□□ -0.12
HDLBP-236ENST00000477477 SPRYD7Q5W111 196 aa14.33□□□□□ -0.12
HDLBP-236ENST00000477477 ZNF296Q8WUU4 475 aaPredicted RBP14.33□□□□□ -0.12
HDLBP-236ENST00000477477 VEZTQ9HBM0 779 aa14.33□□□□□ -0.12
HDLBP-236ENST00000477477 RIPOR2Q9Y4F9 1068 aa14.33□□□□□ -0.12
HDLBP-236ENST00000477477 PTPRCP08575 1304 aa14.33□□□□□ -0.12
HDLBP-236ENST00000477477 MROH5Q6ZUA9 1318 aa14.33□□□□□ -0.12
HDLBP-236ENST00000477477 PPP1R12BO60237 982 aaPredicted RBP14.32□□□□□ -0.12
HDLBP-236ENST00000477477 NOM1Q5C9Z4 860 aaKnown RBP14.32□□□□□ -0.12
HDLBP-236ENST00000477477 MFSD14BQ5SR56 506 aa14.32□□□□□ -0.12
HDLBP-236ENST00000477477 ANKRD44Q8N8A2 993 aa14.32□□□□□ -0.12
HDLBP-236ENST00000477477 FAM84BQ96KN1 310 aaPredicted RBP14.32□□□□□ -0.12
HDLBP-236ENST00000477477 RBM5P52756 815 aaKnown RBP eCLIP14.31□□□□□ -0.125e-8■■□□□ 14.3
HDLBP-236ENST00000477477 SUPT20HL1Q3ZLR7 823 aa14.31□□□□□ -0.12
HDLBP-236ENST00000477477 SSH1Q8WYL5 1049 aa14.31□□□□□ -0.12
HDLBP-236ENST00000477477 CFHR5Q9BXR6 569 aa14.31□□□□□ -0.12
HDLBP-236ENST00000477477 SERPINA10Q9UK55 444 aa14.31□□□□□ -0.12
HDLBP-236ENST00000477477 TTF2Q9UNY4 1162 aaKnown RBP14.31□□□□□ -0.12
HDLBP-236ENST00000477477 ECM29Q5VYK3 1845 aa14.3□□□□□ -0.12
HDLBP-236ENST00000477477 UNCXA6NJT0 531 aa14.3□□□□□ -0.12
HDLBP-236ENST00000477477 GPR25O00155 361 aa14.3□□□□□ -0.12
HDLBP-236ENST00000477477 ZBTB48P10074 688 aaPredicted RBP14.3□□□□□ -0.12
HDLBP-236ENST00000477477 RASA3Q14644 834 aa14.3□□□□□ -0.12
HDLBP-236ENST00000477477 PKN2Q16513 984 aaKnown RBP14.3□□□□□ -0.12
HDLBP-236ENST00000477477 SPDYE2Q495Y8 402 aa14.3□□□□□ -0.12
HDLBP-236ENST00000477477 LRRC24Q50LG9 513 aa14.3□□□□□ -0.12
HDLBP-236ENST00000477477 METTL24Q5JXM2 366 aa14.3□□□□□ -0.12
HDLBP-236ENST00000477477 NBPF12Q5TAG4 269 aaPredicted RBP14.3□□□□□ -0.12
HDLBP-236ENST00000477477 SLC10A4Q96EP9 437 aa14.3□□□□□ -0.12
HDLBP-236ENST00000477477 CLMNQ96JQ2 1002 aa14.3□□□□□ -0.12
HDLBP-236ENST00000477477 MANSC4A6NHS7 340 aaPredicted RBP14.29□□□□□ -0.12
HDLBP-236ENST00000477477 SLFN5Q08AF3 891 aa14.29□□□□□ -0.12
HDLBP-236ENST00000477477 TNFAIP1Q13829 316 aa14.29□□□□□ -0.12
HDLBP-236ENST00000477477 FBXO33Q7Z6M2 555 aa14.29□□□□□ -0.12
HDLBP-236ENST00000477477 VGLL2Q8N8G2 317 aa14.29□□□□□ -0.12
HDLBP-236ENST00000477477 WNK4Q96J92 1243 aa14.29□□□□□ -0.12
HDLBP-236ENST00000477477 ZNF70Q9UC06 446 aaPredicted RBP14.29□□□□□ -0.12
HDLBP-236ENST00000477477 HPS5Q9UPZ3 1129 aa14.29□□□□□ -0.12
HDLBP-236ENST00000477477 PDE8BO95263 885 aa14.28□□□□□ -0.12
HDLBP-236ENST00000477477 ALDH1A1P00352 501 aa14.28□□□□□ -0.12
HDLBP-236ENST00000477477 CRKP46108 304 aa14.28□□□□□ -0.12
HDLBP-236ENST00000477477 IREB2P48200 963 aaKnown RBP14.28□□□□□ -0.12
HDLBP-236ENST00000477477 SOX10P56693 466 aa14.28□□□□□ -0.12
HDLBP-236ENST00000477477 VPS37DQ86XT2 251 aa14.28□□□□□ -0.12
HDLBP-236ENST00000477477 DZIP1LQ8IYY4 767 aaKnown RBP14.28□□□□□ -0.12
HDLBP-236ENST00000477477 USP44Q9H0E7 712 aa14.28□□□□□ -0.12
HDLBP-236ENST00000477477 TDRD3Q9H7E2 651 aaKnown RBP14.28□□□□□ -0.12
HDLBP-236ENST00000477477 ARAP2Q8WZ64 1704 aa14.27□□□□□ -0.12
HDLBP-236ENST00000477477 USP2O75604 605 aaPredicted RBP14.27□□□□□ -0.13
HDLBP-236ENST00000477477 INHBEP58166 350 aa14.27□□□□□ -0.13
HDLBP-236ENST00000477477 GRIK5Q16478 980 aa14.27□□□□□ -0.13
HDLBP-236ENST00000477477 CAVIN4Q5BKX8 364 aa14.27□□□□□ -0.13
HDLBP-236ENST00000477477 IFNL1Q8IU54 200 aa14.27□□□□□ -0.13
HDLBP-236ENST00000477477 KLHDC4Q8TBB5 520 aa14.27□□□□□ -0.13
HDLBP-236ENST00000477477 TBC1D22AQ8WUA7 517 aa14.27□□□□□ -0.13
HDLBP-236ENST00000477477 R3HDMLQ9H3Y0 253 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms