RNA–Protein interactions for RNA: ENST00000471459.1

HOXB3-206, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-206ENST00000471459 IFIT1P09914 478 aaKnown RBP18.61■□□□□ 0.57
HOXB3-206ENST00000471459 FKBP1BP68106 108 aa18.61■□□□□ 0.57
HOXB3-206ENST00000471459 COL13A1Q5TAT6 717 aaPredicted RBP18.61■□□□□ 0.57
HOXB3-206ENST00000471459 DLK2Q6UY11 383 aa18.61■□□□□ 0.57
HOXB3-206ENST00000471459 TDRD7Q8NHU6 1098 aaKnown RBP18.61■□□□□ 0.57
HOXB3-206ENST00000471459 FAM84BQ96KN1 310 aaPredicted RBP18.61■□□□□ 0.57
HOXB3-206ENST00000471459 FBXO3Q9UK99 471 aa18.61■□□□□ 0.57
HOXB3-206ENST00000471459 F8W031 263 aaPredicted RBP18.6■□□□□ 0.57
HOXB3-206ENST00000471459 EYA2O00167 538 aa18.6■□□□□ 0.57
HOXB3-206ENST00000471459 FOXN1O15353 648 aa18.6■□□□□ 0.57
HOXB3-206ENST00000471459 RBM5P52756 815 aaKnown RBP eCLIP18.6■□□□□ 0.57
HOXB3-206ENST00000471459 NOGQ13253 232 aa18.6■□□□□ 0.57
HOXB3-206ENST00000471459 INTS3Q68E01 1043 aaKnown RBP18.6■□□□□ 0.57
HOXB3-206ENST00000471459 RGMBQ6NW40 437 aa18.6■□□□□ 0.57
HOXB3-206ENST00000471459 APOBEC3FQ8IUX4 373 aaKnown RBP18.6■□□□□ 0.57
HOXB3-206ENST00000471459 FAM205AQ6ZU69 1335 aa18.59■□□□□ 0.57
HOXB3-206ENST00000471459 ZNF157P51786 506 aaPredicted RBP18.59■□□□□ 0.57
HOXB3-206ENST00000471459 PUM3Q15397 648 aaKnown RBP18.59■□□□□ 0.57
HOXB3-206ENST00000471459 ATF7IPQ6VMQ6 1270 aa18.59■□□□□ 0.57
HOXB3-206ENST00000471459 TNS4Q8IZW8 715 aa18.59■□□□□ 0.57
HOXB3-206ENST00000471459 KLHDC4Q8TBB5 520 aa18.59■□□□□ 0.57
HOXB3-206ENST00000471459 CEP126Q9P2H0 1117 aa18.59■□□□□ 0.57
HOXB3-206ENST00000471459 LRRFIP2Q9Y608 721 aaKnown RBP18.59■□□□□ 0.57
HOXB3-206ENST00000471459 TRPM7Q96QT4 1865 aa18.58■□□□□ 0.57
HOXB3-206ENST00000471459 AOC2O75106 756 aa18.58■□□□□ 0.56
HOXB3-206ENST00000471459 SLC5A1P13866 664 aa18.58■□□□□ 0.56
HOXB3-206ENST00000471459 TTLL12Q14166 644 aaPredicted RBP18.58■□□□□ 0.56
HOXB3-206ENST00000471459 MFSD14BQ5SR56 506 aa18.58■□□□□ 0.56
HOXB3-206ENST00000471459 FBXO33Q7Z6M2 555 aa18.58■□□□□ 0.56
HOXB3-206ENST00000471459 CERS5Q8N5B7 392 aa18.58■□□□□ 0.56
HOXB3-206ENST00000471459 TBC1D22AQ8WUA7 517 aa18.58■□□□□ 0.56
HOXB3-206ENST00000471459 PRDM10Q9NQV6 1147 aa18.58■□□□□ 0.56
HOXB3-206ENST00000471459 JAG2Q9Y219 1238 aa18.58■□□□□ 0.56
HOXB3-206ENST00000471459 CA12O43570 354 aa18.57■□□□□ 0.56
HOXB3-206ENST00000471459 BCAR3O75815 825 aa18.57■□□□□ 0.56
HOXB3-206ENST00000471459 PTPN12Q05209 780 aaKnown RBP18.57■□□□□ 0.56
HOXB3-206ENST00000471459 ZKSCAN2Q63HK3 967 aa18.57■□□□□ 0.56
HOXB3-206ENST00000471459 MTMR14Q8NCE2 650 aa18.57■□□□□ 0.56
HOXB3-206ENST00000471459 LPIN2Q92539 896 aa18.57■□□□□ 0.56
HOXB3-206ENST00000471459 CIAO1O76071 339 aa18.56■□□□□ 0.56
HOXB3-206ENST00000471459 RFX5P48382 616 aaPredicted RBP18.56■□□□□ 0.56
HOXB3-206ENST00000471459 CFAP100Q494V2 611 aa18.56■□□□□ 0.56
HOXB3-206ENST00000471459 MEIS3Q99687 375 aa18.56■□□□□ 0.56
HOXB3-206ENST00000471459 SIL1Q9H173 461 aa18.56■□□□□ 0.56
HOXB3-206ENST00000471459 TTF2Q9UNY4 1162 aaKnown RBP18.56■□□□□ 0.56
HOXB3-206ENST00000471459 TRIM27P14373 513 aa18.55■□□□□ 0.56
HOXB3-206ENST00000471459 IL15P40933 162 aaPredicted RBP18.55■□□□□ 0.56
HOXB3-206ENST00000471459 LBX1P52954 281 aa18.55■□□□□ 0.56
HOXB3-206ENST00000471459 CHAF1AQ13111 956 aaPredicted RBP18.55■□□□□ 0.56
HOXB3-206ENST00000471459 VGLL2Q8N8G2 317 aa18.55■□□□□ 0.56
HOXB3-206ENST00000471459 CLUAP1Q96AJ1 413 aa18.55■□□□□ 0.56
HOXB3-206ENST00000471459 ZBED3Q96IU2 234 aaPredicted RBP18.55■□□□□ 0.56
HOXB3-206ENST00000471459 GNL3LQ9NVN8 582 aaKnown RBP18.55■□□□□ 0.56
HOXB3-206ENST00000471459 SERPINA10Q9UK55 444 aa18.55■□□□□ 0.56
HOXB3-206ENST00000471459 PSME4Q14997 1843 aa18.54■□□□□ 0.56
HOXB3-206ENST00000471459 BCAMP50895 628 aa18.54■□□□□ 0.56
HOXB3-206ENST00000471459 PRAMEF18Q5VWM3 479 aa18.54■□□□□ 0.56
HOXB3-206ENST00000471459 ARMC9Q7Z3E5 817 aa18.54■□□□□ 0.56
HOXB3-206ENST00000471459 SCAF8Q9UPN6 1271 aaKnown RBP18.54■□□□□ 0.56
HOXB3-206ENST00000471459 IQSEC3Q9UPP2 1182 aaPredicted RBP18.54■□□□□ 0.56
HOXB3-206ENST00000471459 PPP2R3BQ9Y5P8 575 aa18.54■□□□□ 0.56
HOXB3-206ENST00000471459 SPDYE2BA6NHP3 402 aa18.53■□□□□ 0.56
HOXB3-206ENST00000471459 SRGAP3O43295 1099 aa18.53■□□□□ 0.56
HOXB3-206ENST00000471459 GNAI2P04899 355 aa18.53■□□□□ 0.56
HOXB3-206ENST00000471459 SPDYE6P0CI01 402 aa18.53■□□□□ 0.56
HOXB3-206ENST00000471459 SUPT20HL1Q3ZLR7 823 aa18.53■□□□□ 0.56
HOXB3-206ENST00000471459 FTSJ3Q8IY81 847 aaKnown RBP18.53■□□□□ 0.56
HOXB3-206ENST00000471459 REM2Q8IYK8 340 aaPredicted RBP18.53■□□□□ 0.56
HOXB3-206ENST00000471459 DEFB129Q9H1M3 183 aa18.53■□□□□ 0.56
HOXB3-206ENST00000471459 ZBED9Q6R2W3 1325 aa18.52■□□□□ 0.56
HOXB3-206ENST00000471459 PCNTO95613 3336 aa18.52■□□□□ 0.56
HOXB3-206ENST00000471459 FGFR2P21802 821 aa18.52■□□□□ 0.56
HOXB3-206ENST00000471459 TNFAIP1Q13829 316 aa18.52■□□□□ 0.56
HOXB3-206ENST00000471459 ATP2B3Q16720 1220 aa18.52■□□□□ 0.56
HOXB3-206ENST00000471459 ATG9AQ7Z3C6 839 aa18.52■□□□□ 0.56
HOXB3-206ENST00000471459 PRMT6Q96LA8 375 aaPredicted RBP18.52■□□□□ 0.56
HOXB3-206ENST00000471459 VEZTQ9HBM0 779 aa18.52■□□□□ 0.56
HOXB3-206ENST00000471459 COPRSQ9NQ92 184 aa18.52■□□□□ 0.56
HOXB3-206ENST00000471459 UBE2Q2LH0YL09 131 aa18.51■□□□□ 0.55
HOXB3-206ENST00000471459 PPP1R12BO60237 982 aaPredicted RBP18.51■□□□□ 0.55
HOXB3-206ENST00000471459 HSPA8P11142 646 aaKnown RBP18.51■□□□□ 0.55
HOXB3-206ENST00000471459 HDLBPQ00341 1268 aaKnown RBP18.51■□□□□ 0.55
HOXB3-206ENST00000471459 WDR66Q8TBY9 1149 aa18.51■□□□□ 0.55
HOXB3-206ENST00000471459 AKAP2Q9Y2D5 859 aa18.51■□□□□ 0.55
HOXB3-206ENST00000471459 SUGT1Q9Y2Z0 365 aa18.51■□□□□ 0.55
HOXB3-206ENST00000471459 MAST3O60307 1309 aa18.5■□□□□ 0.55
HOXB3-206ENST00000471459 POLR2AP24928 1970 aaKnown RBP18.5■□□□□ 0.55
HOXB3-206ENST00000471459 CLRN2A0PK11 232 aa18.5■□□□□ 0.55
HOXB3-206ENST00000471459 KIF23Q02241 960 aaPredicted RBP18.5■□□□□ 0.55
HOXB3-206ENST00000471459 FAM155AB1AL88 458 aaPredicted RBP18.49■□□□□ 0.55
HOXB3-206ENST00000471459 SLC10A3P09131 477 aa18.49■□□□□ 0.55
HOXB3-206ENST00000471459 CRKP46108 304 aa18.49■□□□□ 0.55
HOXB3-206ENST00000471459 TNNI2P48788 182 aa18.49■□□□□ 0.55
HOXB3-206ENST00000471459 PRKG1Q13976 671 aa18.49■□□□□ 0.55
HOXB3-206ENST00000471459 DZIP1LQ8IYY4 767 aaKnown RBP18.49■□□□□ 0.55
HOXB3-206ENST00000471459 TEKT1Q969V4 418 aa18.49■□□□□ 0.55
HOXB3-206ENST00000471459 MRIQ9BWK5 157 aa18.49■□□□□ 0.55
HOXB3-206ENST00000471459 PA2G4Q9UQ80 394 aaKnown RBP18.49■□□□□ 0.55
HOXB3-206ENST00000471459 MTX1Q13505 466 aa18.48■□□□□ 0.55
HOXB3-206ENST00000471459 MOB2Q70IA6 237 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms